RNA–Protein interactions for RNA: ENST00000562523.1

NIP7-204, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 3

Gene NIP7, Length 760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-204ENST00000562523 SPDYE5A6NIY4 337 aa8.58□□□□□ -1.04
NIP7-204ENST00000562523 BARGINQ6ZT62 677 aa8.58□□□□□ -1.04
NIP7-204ENST00000562523 TRIM46Q7Z4K8 759 aa8.58□□□□□ -1.04
NIP7-204ENST00000562523 BEGAINQ9BUH8 593 aa8.58□□□□□ -1.04
NIP7-204ENST00000562523 PLEKHG3A1L390 1219 aa8.57□□□□□ -1.04
NIP7-204ENST00000562523 CTHP32929 405 aa8.57□□□□□ -1.04
NIP7-204ENST00000562523 LCE2CQ5TA81 110 aa8.57□□□□□ -1.04
NIP7-204ENST00000562523 GIGYF2Q6Y7W6 1299 aaKnown RBP8.57□□□□□ -1.04
NIP7-204ENST00000562523 NXF1Q9UBU9 619 aaKnown RBP8.57□□□□□ -1.04
NIP7-204ENST00000562523 TLL2Q9Y6L7 1015 aa8.57□□□□□ -1.04
NIP7-204ENST00000562523 ZMYND10O75800 440 aa8.56□□□□□ -1.04
NIP7-204ENST00000562523 ZNF511Q8NB15 262 aa8.56□□□□□ -1.04
NIP7-204ENST00000562523 VARSP26640 1264 aaKnown RBP8.55□□□□□ -1.04
NIP7-204ENST00000562523 AMHR2Q16671 573 aa8.55□□□□□ -1.04
NIP7-204ENST00000562523 VEGFBP49765 207 aa8.54□□□□□ -1.04
NIP7-204ENST00000562523 DESI1Q6ICB0 168 aa8.54□□□□□ -1.04
NIP7-204ENST00000562523 ZC3H15Q8WU90 426 aaKnown RBP8.54□□□□□ -1.04
NIP7-204ENST00000562523 TBC1D2Q9BYX2 928 aa8.54□□□□□ -1.04
NIP7-204ENST00000562523 NNTQ13423 1086 aa8.53□□□□□ -1.04
NIP7-204ENST00000562523 DIXDC1Q155Q3 683 aa8.53□□□□□ -1.04
NIP7-204ENST00000562523 ZFP42Q96MM3 310 aa8.53□□□□□ -1.04
NIP7-204ENST00000562523 ARID5BQ14865 1188 aa8.52□□□□□ -1.05
NIP7-204ENST00000562523 IRF7Q92985 503 aa8.52□□□□□ -1.05
NIP7-204ENST00000562523 PCDHB15Q9Y5E8 787 aa8.52□□□□□ -1.05
NIP7-204ENST00000562523 GMPRP36959 345 aa8.51□□□□□ -1.05
NIP7-204ENST00000562523 SCARF1Q14162 830 aa8.51□□□□□ -1.05
NIP7-204ENST00000562523 RSBN1LQ6PCB5 846 aaPredicted RBP8.51□□□□□ -1.05
NIP7-204ENST00000562523 LYPD8Q6UX82 237 aa8.51□□□□□ -1.05
NIP7-204ENST00000562523 FAM174AQ8TBP5 190 aa8.51□□□□□ -1.05
NIP7-204ENST00000562523 GJA5P36382 358 aa8.5□□□□□ -1.05
NIP7-204ENST00000562523 WDR4P57081 412 aaKnown RBP8.5□□□□□ -1.05
NIP7-204ENST00000562523 AGERQ15109 404 aa8.5□□□□□ -1.05
NIP7-204ENST00000562523 CSPP1Q1MSJ5 1256 aa8.5□□□□□ -1.05
NIP7-204ENST00000562523 MPNDQ8N594 471 aa8.5□□□□□ -1.05
NIP7-204ENST00000562523 FAM181BA6NEQ2 426 aa8.49□□□□□ -1.05
NIP7-204ENST00000562523 CFAP99D6REC4 459 aa8.49□□□□□ -1.05
NIP7-204ENST00000562523 MRPL14Q6P1L8 145 aaKnown RBP8.49□□□□□ -1.05
NIP7-204ENST00000562523 NPAS3Q8IXF0 933 aa8.49□□□□□ -1.05
NIP7-204ENST00000562523 PURBQ96QR8 312 aaKnown RBP8.49□□□□□ -1.05
NIP7-204ENST00000562523 ZBTB3Q9H5J0 574 aa8.49□□□□□ -1.05
NIP7-204ENST00000562523 SPTLC1O15269 473 aa8.48□□□□□ -1.05
NIP7-204ENST00000562523 ADH1CP00326 375 aa8.48□□□□□ -1.05
NIP7-204ENST00000562523 HRCP23327 699 aa8.48□□□□□ -1.05
NIP7-204ENST00000562523 RIC3Q7Z5B4 369 aa8.48□□□□□ -1.05
NIP7-204ENST00000562523 PARP9Q8IXQ6 854 aa8.48□□□□□ -1.05
NIP7-204ENST00000562523 TSC1Q92574 1164 aa8.48□□□□□ -1.05
NIP7-204ENST00000562523 FOXJ1Q92949 421 aa8.48□□□□□ -1.05
NIP7-204ENST00000562523 NCAPD3P42695 1498 aa8.47□□□□□ -1.05
NIP7-204ENST00000562523 H3BM21 787 aa8.47□□□□□ -1.05
NIP7-204ENST00000562523 MAP10Q9P2G4 905 aa8.47□□□□□ -1.05
NIP7-204ENST00000562523 TRIM66O15016 1216 aa8.46□□□□□ -1.06
NIP7-204ENST00000562523 TIMP2P16035 220 aa8.46□□□□□ -1.06
NIP7-204ENST00000562523 ZSCAN1Q8NBB4 408 aa8.46□□□□□ -1.06
NIP7-204ENST00000562523 CABLES1Q8TDN4 633 aa8.46□□□□□ -1.06
NIP7-204ENST00000562523 NESP48681 1621 aa8.46□□□□□ -1.06
NIP7-204ENST00000562523 THOC2Q8NI27 1593 aaKnown RBP8.45□□□□□ -1.06
NIP7-204ENST00000562523 NUTM2BA6NNL0 878 aaPredicted RBP8.45□□□□□ -1.06
NIP7-204ENST00000562523 SOBPA7XYQ1 873 aa8.45□□□□□ -1.06
NIP7-204ENST00000562523 NUTM2EB1AL46 878 aaPredicted RBP8.45□□□□□ -1.06
NIP7-204ENST00000562523 NUTM2DQ5VT03 806 aaPredicted RBP8.45□□□□□ -1.06
NIP7-204ENST00000562523 NUTM2AQ8IVF1 878 aaPredicted RBP8.45□□□□□ -1.06
NIP7-204ENST00000562523 AK7Q96M32 723 aa8.45□□□□□ -1.06
NIP7-204ENST00000562523 SMARCA2P51531 1590 aa8.44□□□□□ -1.06
NIP7-204ENST00000562523 KIF21AQ7Z4S6 1674 aa8.44□□□□□ -1.06
NIP7-204ENST00000562523 ZIC2O95409 532 aaPredicted RBP8.44□□□□□ -1.06
NIP7-204ENST00000562523 PRPF38BQ5VTL8 546 aaKnown RBP8.44□□□□□ -1.06
NIP7-204ENST00000562523 CDK15Q96Q40 435 aa8.44□□□□□ -1.06
NIP7-204ENST00000562523 HMGXB3Q12766 1538 aa8.44□□□□□ -1.06
NIP7-204ENST00000562523 SMARCA4P51532 1647 aa8.43□□□□□ -1.06
NIP7-204ENST00000562523 C6orf118Q5T5N4 469 aa8.43□□□□□ -1.06
NIP7-204ENST00000562523 BPHLQ86WA6 291 aaPredicted RBP8.43□□□□□ -1.06
NIP7-204ENST00000562523 ZFAND3Q9H8U3 227 aa8.43□□□□□ -1.06
NIP7-204ENST00000562523 ERBB4Q15303 1308 aa8.43□□□□□ -1.06
NIP7-204ENST00000562523 PER1O15534 1290 aaPredicted RBP8.42□□□□□ -1.06
NIP7-204ENST00000562523 F12P00748 615 aaPredicted RBP8.42□□□□□ -1.06
NIP7-204ENST00000562523 NR5A1Q13285 461 aa8.42□□□□□ -1.06
NIP7-204ENST00000562523 KLF16Q9BXK1 252 aaPredicted RBP8.42□□□□□ -1.06
NIP7-204ENST00000562523 ATAD2BQ9ULI0 1458 aa8.42□□□□□ -1.06
NIP7-204ENST00000562523 MAN1A2O60476 641 aa8.41□□□□□ -1.06
NIP7-204ENST00000562523 UPP2O95045 317 aa8.41□□□□□ -1.06
NIP7-204ENST00000562523 ITPKCQ96DU7 683 aa8.41□□□□□ -1.06
NIP7-204ENST00000562523 NR3C2P08235 984 aa8.4□□□□□ -1.06
NIP7-204ENST00000562523 GRM5P41594 1212 aa8.4□□□□□ -1.06
NIP7-204ENST00000562523 ARMC2Q8NEN0 867 aa8.4□□□□□ -1.06
NIP7-204ENST00000562523 BMP2P12643 396 aa8.39□□□□□ -1.07
NIP7-204ENST00000562523 C4orf48Q5BLP8 95 aa8.39□□□□□ -1.07
NIP7-204ENST00000562523 LIMD1Q9UGP4 676 aa8.39□□□□□ -1.07
NIP7-204ENST00000562523 QPCTQ16769 361 aa8.38□□□□□ -1.07
NIP7-204ENST00000562523 MYSM1Q5VVJ2 828 aa8.38□□□□□ -1.07
NIP7-204ENST00000562523 BAZ1BQ9UIG0 1483 aaKnown RBP8.38□□□□□ -1.07
NIP7-204ENST00000562523 PDS5BQ9NTI5 1447 aa8.37□□□□□ -1.07
NIP7-204ENST00000562523 LAMC3Q9Y6N6 1575 aa8.37□□□□□ -1.07
NIP7-204ENST00000562523 LORP23490 312 aaPredicted RBP8.37□□□□□ -1.07
NIP7-204ENST00000562523 MAGEB6P1A0A0J9YX57 407 aa8.36□□□□□ -1.07
NIP7-204ENST00000562523 PDE4DQ08499 809 aa8.36□□□□□ -1.07
NIP7-204ENST00000562523 VASH1Q7L8A9 365 aaPredicted RBP8.36□□□□□ -1.07
NIP7-204ENST00000562523 HELBQ8NG08 1087 aaPredicted RBP8.36□□□□□ -1.07
NIP7-204ENST00000562523 LILRB3O75022 631 aa8.35□□□□□ -1.07
NIP7-204ENST00000562523 NBPF14Q5TI25 921 aa8.35□□□□□ -1.07
NIP7-204ENST00000562523 FSHRP23945 695 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms