RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 LTKP29376 864 aa12.81□□□□□ -0.36
SMG1-205ENST00000561947 NEUROD2Q15784 382 aa12.81□□□□□ -0.36
SMG1-205ENST00000561947 NUDT16Q96DE0 195 aaKnown RBP12.8□□□□□ -0.36
SMG1-205ENST00000561947 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.8□□□□□ -0.36
SMG1-205ENST00000561947 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.8□□□□□ -0.36
SMG1-205ENST00000561947 MAP2P11137 1827 aaKnown RBP12.8□□□□□ -0.36
SMG1-205ENST00000561947 FANCIQ9NVI1 1328 aa12.79□□□□□ -0.36
SMG1-205ENST00000561947 TOPAZ1Q8N9V7 1692 aa12.79□□□□□ -0.36
SMG1-205ENST00000561947 U2SURPO15042 1029 aaKnown RBP12.78□□□□□ -0.36
SMG1-205ENST00000561947 PLEKHF1Q96S99 279 aa12.78□□□□□ -0.36
SMG1-205ENST00000561947 EID1Q9Y6B2 187 aa12.78□□□□□ -0.36
SMG1-205ENST00000561947 CCDC61Q9Y6R9 512 aa12.78□□□□□ -0.36
SMG1-205ENST00000561947 DIAPH1O60610 1272 aaKnown RBP12.78□□□□□ -0.36
SMG1-205ENST00000561947 BCAR3O75815 825 aa12.77□□□□□ -0.37
SMG1-205ENST00000561947 TRHP20396 242 aaPredicted RBP12.77□□□□□ -0.37
SMG1-205ENST00000561947 PTPRUQ92729 1446 aa12.77□□□□□ -0.37
SMG1-205ENST00000561947 PRR36Q9H6K5 1346 aa12.76□□□□□ -0.37
SMG1-205ENST00000561947 DIP2AQ14689 1571 aa12.76□□□□□ -0.37
SMG1-205ENST00000561947 POLKQ9UBT6 870 aa12.76□□□□□ -0.37
SMG1-205ENST00000561947 NCKAP5LQ9HCH0 1330 aa12.76□□□□□ -0.37
SMG1-205ENST00000561947 MAPK8IP3Q9UPT6 1336 aa12.76□□□□□ -0.37
SMG1-205ENST00000561947 NME9Q86XW9 330 aa12.75□□□□□ -0.37
SMG1-205ENST00000561947 NRKQ7Z2Y5 1582 aa12.75□□□□□ -0.37
SMG1-205ENST00000561947 TMPOP42166 694 aaKnown RBP12.75□□□□□ -0.37
SMG1-205ENST00000561947 PLPPR3Q6T4P5 718 aa12.75□□□□□ -0.37
SMG1-205ENST00000561947 PNNQ9H307 717 aaKnown RBP12.75□□□□□ -0.37
SMG1-205ENST00000561947 MYH16Q9H6N6 1097 aa12.75□□□□□ -0.37
SMG1-205ENST00000561947 LRRC7Q96NW7 1537 aa12.74□□□□□ -0.37
SMG1-205ENST00000561947 CDK12Q9NYV4 1490 aaPredicted RBP12.74□□□□□ -0.37
SMG1-205ENST00000561947 AATKQ6ZMQ8 1374 aa12.74□□□□□ -0.37
SMG1-205ENST00000561947 SLC26A8Q96RN1 970 aa12.74□□□□□ -0.37
SMG1-205ENST00000561947 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
SMG1-205ENST00000561947 TCERG1O14776 1098 aaKnown RBP12.74□□□□□ -0.37
SMG1-205ENST00000561947 THEMISQ8N1K5 641 aaPredicted RBP12.74□□□□□ -0.37
SMG1-205ENST00000561947 TBX22Q9Y458 520 aa12.74□□□□□ -0.37
SMG1-205ENST00000561947 PTCH1Q13635 1447 aa12.73□□□□□ -0.37
SMG1-205ENST00000561947 KDM2BQ8NHM5 1336 aa12.73□□□□□ -0.37
SMG1-205ENST00000561947 FBLN1P23142 703 aa12.73□□□□□ -0.37
SMG1-205ENST00000561947 AEBP2Q6ZN18 517 aaPredicted RBP12.73□□□□□ -0.37
SMG1-205ENST00000561947 PDE3AQ14432 1141 aa12.72□□□□□ -0.37
SMG1-205ENST00000561947 ZRANB1Q9UGI0 708 aa12.72□□□□□ -0.37
SMG1-205ENST00000561947 TRIM35Q9UPQ4 493 aa12.72□□□□□ -0.37
SMG1-205ENST00000561947 XRN1Q8IZH2 1706 aaKnown RBP12.72□□□□□ -0.37
SMG1-205ENST00000561947 CEP170BQ9Y4F5 1589 aaPredicted RBP12.72□□□□□ -0.37
SMG1-205ENST00000561947 FCHSD2O94868 740 aa12.72□□□□□ -0.37
SMG1-205ENST00000561947 RARSP54136 660 aaKnown RBP12.72□□□□□ -0.37
SMG1-205ENST00000561947 COG3Q96JB2 828 aa12.72□□□□□ -0.37
SMG1-205ENST00000561947 RIMS1Q86UR5 1692 aaKnown RBP12.71□□□□□ -0.37
SMG1-205ENST00000561947 PPM1GO15355 546 aaPredicted RBP12.71□□□□□ -0.37
SMG1-205ENST00000561947 AMOTL2Q9Y2J4 779 aa12.71□□□□□ -0.37
SMG1-205ENST00000561947 PLEKHG3A1L390 1219 aa12.71□□□□□ -0.38
SMG1-205ENST00000561947 CENPQQ7L2Z9 268 aaPredicted RBP12.71□□□□□ -0.38
SMG1-205ENST00000561947 EMILIN1Q9Y6C2 1016 aa12.71□□□□□ -0.38
SMG1-205ENST00000561947 RSPH6AQ9H0K4 717 aa12.7□□□□□ -0.38
SMG1-205ENST00000561947 IL16Q14005 1332 aa12.7□□□□□ -0.38
SMG1-205ENST00000561947 CANXP27824 592 aaKnown RBP12.7□□□□□ -0.38
SMG1-205ENST00000561947 MS4A1P11836 297 aa12.69□□□□□ -0.38
SMG1-205ENST00000561947 RIPK4P57078 832 aa12.69□□□□□ -0.38
SMG1-205ENST00000561947 ACEP12821 1306 aa12.69□□□□□ -0.38
SMG1-205ENST00000561947 NALCNQ8IZF0 1738 aa12.69□□□□□ -0.38
SMG1-205ENST00000561947 CT47B1P0C2W7 299 aaPredicted RBP12.69□□□□□ -0.38
SMG1-205ENST00000561947 IL13P35225 146 aa12.69□□□□□ -0.38
SMG1-205ENST00000561947 USP6P35125 1406 aa12.69□□□□□ -0.38
SMG1-205ENST00000561947 TTC21BQ7Z4L5 1316 aa12.69□□□□□ -0.38
SMG1-205ENST00000561947 PRKAR2BP31323 418 aa12.68□□□□□ -0.38
SMG1-205ENST00000561947 MSH5O43196 834 aa12.68□□□□□ -0.38
SMG1-205ENST00000561947 RGPD8O14715 1765 aaPredicted RBP12.67□□□□□ -0.38
SMG1-205ENST00000561947 OVOS2A0A0J9YW53 1432 aa12.67□□□□□ -0.38
SMG1-205ENST00000561947 OVOS2Q6IE36 1432 aa12.67□□□□□ -0.38
SMG1-205ENST00000561947 NEFMP07197 916 aa12.67□□□□□ -0.38
SMG1-205ENST00000561947 ZNF142P52746 1687 aaPredicted RBP12.67□□□□□ -0.38
SMG1-205ENST00000561947 PANK1Q8TE04 598 aa12.67□□□□□ -0.38
SMG1-205ENST00000561947 FRAT1Q92837 279 aaPredicted RBP12.67□□□□□ -0.38
SMG1-205ENST00000561947 TSR2Q969E8 191 aaKnown RBP12.67□□□□□ -0.38
SMG1-205ENST00000561947 NUTM2FA1L443 756 aa12.66□□□□□ -0.38
SMG1-205ENST00000561947 RRS1Q15050 365 aaKnown RBP12.66□□□□□ -0.38
SMG1-205ENST00000561947 PIK3R4Q99570 1358 aa12.66□□□□□ -0.38
SMG1-205ENST00000561947 SSH2Q76I76 1423 aa12.66□□□□□ -0.38
SMG1-205ENST00000561947 HMOX1P09601 288 aa12.65□□□□□ -0.38
SMG1-205ENST00000561947 EXOSC9Q06265 439 aaKnown RBP12.65□□□□□ -0.38
SMG1-205ENST00000561947 NFE2L2Q16236 605 aa12.65□□□□□ -0.38
SMG1-205ENST00000561947 BCL2L13Q9BXK5 485 aa12.65□□□□□ -0.38
SMG1-205ENST00000561947 COG6Q9Y2V7 657 aa12.65□□□□□ -0.38
SMG1-205ENST00000561947 ADAMTSL3P82987 1691 aa12.65□□□□□ -0.38
SMG1-205ENST00000561947 DLG5Q8TDM6 1919 aa12.65□□□□□ -0.38
SMG1-205ENST00000561947 PDE4AP27815 886 aa12.64□□□□□ -0.39
SMG1-205ENST00000561947 CLUAP1Q96AJ1 413 aa12.64□□□□□ -0.39
SMG1-205ENST00000561947 FMN2Q9NZ56 1722 aa12.64□□□□□ -0.39
SMG1-205ENST00000561947 AAMPQ13685 434 aa12.64□□□□□ -0.39
SMG1-205ENST00000561947 SKAP1Q86WV1 359 aa12.64□□□□□ -0.39
SMG1-205ENST00000561947 PHACTR3Q96KR7 559 aa12.64□□□□□ -0.39
SMG1-205ENST00000561947 USP31Q70CQ4 1352 aa12.63□□□□□ -0.39
SMG1-205ENST00000561947 TTC21AQ8NDW8 1320 aa12.63□□□□□ -0.39
SMG1-205ENST00000561947 BACH2Q9BYV9 841 aa12.63□□□□□ -0.39
SMG1-205ENST00000561947 PEAK1Q9H792 1746 aa12.63□□□□□ -0.39
SMG1-205ENST00000561947 ANKARQ7Z5J8 1434 aa12.63□□□□□ -0.39
SMG1-205ENST00000561947 ANP32EQ9BTT0 268 aa12.63□□□□□ -0.39
SMG1-205ENST00000561947 CHD2O14647 1828 aaKnown RBP12.62□□□□□ -0.39
SMG1-205ENST00000561947 RLBP1P12271 317 aa12.62□□□□□ -0.39
SMG1-205ENST00000561947 TNNQ9UQP3 1299 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms