RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 TTC21BQ7Z4L5 1316 aa31.88■■■□□ 2.69
TMEM249-201ENST00000561638 BRD4O60885 1362 aaPredicted RBP31.87■■■□□ 2.69
TMEM249-201ENST00000561638 NHSL1Q5SYE7 1610 aa31.86■■■□□ 2.69
TMEM249-201ENST00000561638 NRKQ7Z2Y5 1582 aa31.86■■■□□ 2.69
TMEM249-201ENST00000561638 DIEXFQ68CQ4 756 aaKnown RBP31.86■■■□□ 2.69
TMEM249-201ENST00000561638 TTC21AQ8NDW8 1320 aa31.85■■■□□ 2.69
TMEM249-201ENST00000561638 LMOD2Q6P5Q4 547 aa31.85■■■□□ 2.69
TMEM249-201ENST00000561638 PXDNQ92626 1479 aa31.85■■■□□ 2.69
TMEM249-201ENST00000561638 SSH2Q76I76 1423 aa31.85■■■□□ 2.69
TMEM249-201ENST00000561638 SOS2Q07890 1332 aaPredicted RBP31.83■■■□□ 2.69
TMEM249-201ENST00000561638 CC2D1BQ5T0F9 858 aaKnown RBP31.82■■■□□ 2.68
TMEM249-201ENST00000561638 NME9Q86XW9 330 aa31.82■■■□□ 2.68
TMEM249-201ENST00000561638 ABTB2Q8N961 1025 aa31.82■■■□□ 2.68
TMEM249-201ENST00000561638 AHDC1Q5TGY3 1603 aaPredicted RBP31.82■■■□□ 2.68
TMEM249-201ENST00000561638 AMER1Q5JTC6 1135 aaPredicted RBP31.81■■■□□ 2.68
TMEM249-201ENST00000561638 SBNO1A3KN83 1393 aa31.8■■■□□ 2.68
TMEM249-201ENST00000561638 FYB1O15117 783 aa31.79■■■□□ 2.68
TMEM249-201ENST00000561638 GGNBP2Q9H3C7 697 aa31.79■■■□□ 2.68
TMEM249-201ENST00000561638 TRPM3Q9HCF6 1732 aaPredicted RBP31.79■■■□□ 2.68
TMEM249-201ENST00000561638 TNS3Q68CZ2 1445 aa31.78■■■□□ 2.68
TMEM249-201ENST00000561638 NSD2O96028 1365 aa31.77■■■□□ 2.68
TMEM249-201ENST00000561638 NUTM2GQ5VZR2 741 aa31.77■■■□□ 2.68
TMEM249-201ENST00000561638 KIF20BQ96Q89 1820 aa31.77■■■□□ 2.68
TMEM249-201ENST00000561638 PHLPP1O60346 1717 aa31.77■■■□□ 2.68
TMEM249-201ENST00000561638 SPATA31A3Q5VYP0 1347 aa31.75■■■□□ 2.67
TMEM249-201ENST00000561638 NLRP6P59044 892 aa31.75■■■□□ 2.67
TMEM249-201ENST00000561638 NPC1L1Q9UHC9 1359 aa31.74■■■□□ 2.67
TMEM249-201ENST00000561638 COG3Q96JB2 828 aa31.74■■■□□ 2.67
TMEM249-201ENST00000561638 LRRC59Q96AG4 307 aaKnown RBP31.73■■■□□ 2.67
TMEM249-201ENST00000561638 PIK3C2AO00443 1686 aa31.73■■■□□ 2.67
TMEM249-201ENST00000561638 ZRANB1Q9UGI0 708 aa31.73■■■□□ 2.67
TMEM249-201ENST00000561638 ARHGEF10O15013 1369 aa31.72■■■□□ 2.67
TMEM249-201ENST00000561638 ANP32CO43423 234 aa31.72■■■□□ 2.67
TMEM249-201ENST00000561638 PLEKHG5O94827 1062 aa31.72■■■□□ 2.67
TMEM249-201ENST00000561638 MORC1Q86VD1 984 aa31.71■■■□□ 2.67
TMEM249-201ENST00000561638 NLRP13Q86W25 1043 aa31.71■■■□□ 2.67
TMEM249-201ENST00000561638 ALS2Q96Q42 1657 aa31.7■■■□□ 2.66
TMEM249-201ENST00000561638 COL16A1Q07092 1604 aaPredicted RBP31.69■■■□□ 2.66
TMEM249-201ENST00000561638 TNNT2P45379 298 aaPredicted RBP31.67■■■□□ 2.66
TMEM249-201ENST00000561638 OVOS2A0A0J9YW53 1432 aa31.67■■■□□ 2.66
TMEM249-201ENST00000561638 OVOS2Q6IE36 1432 aa31.67■■■□□ 2.66
TMEM249-201ENST00000561638 USP31Q70CQ4 1352 aa31.66■■■□□ 2.66
TMEM249-201ENST00000561638 SOX12O15370 315 aa31.65■■■□□ 2.66
TMEM249-201ENST00000561638 ANKRD26Q9UPS8 1709 aa31.65■■■□□ 2.66
TMEM249-201ENST00000561638 HSPA1LP34931 641 aa31.63■■■□□ 2.65
TMEM249-201ENST00000561638 PRKRIP1Q9H875 184 aaPredicted RBP31.63■■■□□ 2.65
TMEM249-201ENST00000561638 RALBP1Q15311 655 aa31.63■■■□□ 2.65
TMEM249-201ENST00000561638 PARD3Q8TEW0 1356 aa31.61■■■□□ 2.65
TMEM249-201ENST00000561638 HAP1P54257 671 aaPredicted RBP31.6■■■□□ 2.65
TMEM249-201ENST00000561638 FBXO41Q8TF61 875 aa31.6■■■□□ 2.65
TMEM249-201ENST00000561638 CABLES1Q8TDN4 633 aa31.59■■■□□ 2.65
TMEM249-201ENST00000561638 USP54Q70EL1 1684 aa31.58■■■□□ 2.65
TMEM249-201ENST00000561638 PNPLA6Q8IY17 1366 aa31.58■■■□□ 2.65
TMEM249-201ENST00000561638 KCNH5Q8NCM2 988 aa31.58■■■□□ 2.65
TMEM249-201ENST00000561638 USP19O94966 1318 aa31.57■■■□□ 2.65
TMEM249-201ENST00000561638 MARF1Q9Y4F3 1742 aaKnown RBP31.56■■■□□ 2.64
TMEM249-201ENST00000561638 MED1Q15648 1581 aaPredicted RBP31.55■■■□□ 2.64
TMEM249-201ENST00000561638 GCP02774 474 aa31.55■■■□□ 2.64
TMEM249-201ENST00000561638 JCADQ9P266 1359 aa31.55■■■□□ 2.64
TMEM249-201ENST00000561638 FBLN1P23142 703 aa31.53■■■□□ 2.64
TMEM249-201ENST00000561638 SLIT3O75094 1523 aa31.52■■■□□ 2.64
TMEM249-201ENST00000561638 MYBBP1AQ9BQG0 1328 aaKnown RBP31.52■■■□□ 2.64
TMEM249-201ENST00000561638 PPP2R1AP30153 589 aa31.5■■■□□ 2.63
TMEM249-201ENST00000561638 COL22A1Q8NFW1 1626 aaPredicted RBP31.49■■■□□ 2.63
TMEM249-201ENST00000561638 PHRF1Q9P1Y6 1649 aaKnown RBP31.49■■■□□ 2.63
TMEM249-201ENST00000561638 AATKQ6ZMQ8 1374 aa31.49■■■□□ 2.63
TMEM249-201ENST00000561638 ZBTB7CA1YPR0 619 aa31.49■■■□□ 2.63
TMEM249-201ENST00000561638 PPM1GO15355 546 aaPredicted RBP31.49■■■□□ 2.63
TMEM249-201ENST00000561638 RRS1Q15050 365 aaKnown RBP31.49■■■□□ 2.63
TMEM249-201ENST00000561638 SHPRHQ149N8 1683 aa31.48■■■□□ 2.63
TMEM249-201ENST00000561638 ZC3H6P61129 1189 aaKnown RBP31.47■■■□□ 2.63
TMEM249-201ENST00000561638 MYT1Q01538 1121 aa31.47■■■□□ 2.63
TMEM249-201ENST00000561638 NFAT5O94916 1531 aa31.46■■■□□ 2.63
TMEM249-201ENST00000561638 CRYBG1Q9Y4K1 1723 aa31.46■■■□□ 2.63
TMEM249-201ENST00000561638 MIER1Q8N108 512 aa31.46■■■□□ 2.63
TMEM249-201ENST00000561638 NUTM2BA6NNL0 878 aaPredicted RBP31.45■■■□□ 2.63
TMEM249-201ENST00000561638 NUTM2EB1AL46 878 aaPredicted RBP31.45■■■□□ 2.63
TMEM249-201ENST00000561638 NUTM2AQ8IVF1 878 aaPredicted RBP31.45■■■□□ 2.63
TMEM249-201ENST00000561638 ABCA3Q99758 1704 aa31.45■■■□□ 2.62
TMEM249-201ENST00000561638 POLKQ9UBT6 870 aa31.44■■■□□ 2.62
TMEM249-201ENST00000561638 EMILIN1Q9Y6C2 1016 aa31.44■■■□□ 2.62
TMEM249-201ENST00000561638 MAP3K19Q56UN5 1328 aa31.44■■■□□ 2.62
TMEM249-201ENST00000561638 MTHFSP49914 203 aa31.43■■■□□ 2.62
TMEM249-201ENST00000561638 AMPHP49418 695 aa31.43■■■□□ 2.62
TMEM249-201ENST00000561638 MAP2P11137 1827 aaKnown RBP31.42■■■□□ 2.62
TMEM249-201ENST00000561638 SPATA31A6Q5VVP1 1343 aa31.4■■■□□ 2.62
TMEM249-201ENST00000561638 KIAA0232Q92628 1395 aa31.4■■■□□ 2.62
TMEM249-201ENST00000561638 PRDM11Q9NQV5 511 aa31.4■■■□□ 2.62
TMEM249-201ENST00000561638 ARHGEF25Q86VW2 580 aa31.39■■■□□ 2.62
TMEM249-201ENST00000561638 LTN1O94822 1766 aa31.39■■■□□ 2.61
TMEM249-201ENST00000561638 ADAMTS2O95450 1211 aa31.38■■■□□ 2.61
TMEM249-201ENST00000561638 CPDO75976 1380 aa31.37■■■□□ 2.61
TMEM249-201ENST00000561638 CFAP53Q96M91 514 aa31.37■■■□□ 2.61
TMEM249-201ENST00000561638 SMG6Q86US8 1419 aaKnown RBP31.36■■■□□ 2.61
TMEM249-201ENST00000561638 FLT4P35916 1363 aa31.35■■■□□ 2.61
TMEM249-201ENST00000561638 CHRNA2Q15822 529 aa31.35■■■□□ 2.61
TMEM249-201ENST00000561638 KIF24Q5T7B8 1368 aa31.34■■■□□ 2.61
TMEM249-201ENST00000561638 RTL1A6NKG5 1358 aa31.33■■■□□ 2.61
TMEM249-201ENST00000561638 CDK12Q9NYV4 1490 aaPredicted RBP31.33■■■□□ 2.61
TMEM249-201ENST00000561638 MRS2Q9HD23 443 aa31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms