RNA–Protein interactions for RNA: ENST00000561356.1

TM2D3-214, Transcript of TM2 domain containing 3, humanhuman

TSL 4

Gene TM2D3, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-214ENST00000561356 TNS3Q68CZ2 1445 aa12.37□□□□□ -0.43
TM2D3-214ENST00000561356 COL14A1Q05707 1796 aaKnown RBP12.36□□□□□ -0.43
TM2D3-214ENST00000561356 KIF3CO14782 793 aa12.36□□□□□ -0.43
TM2D3-214ENST00000561356 PELP1Q8IZL8 1130 aaKnown RBP12.36□□□□□ -0.43
TM2D3-214ENST00000561356 YBX3P16989 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
TM2D3-214ENST00000561356 ARXQ96QS3 562 aa12.35□□□□□ -0.43
TM2D3-214ENST00000561356 RRP7BPQ9NSQ0 103 aa12.35□□□□□ -0.43
TM2D3-214ENST00000561356 MTFR1LQ9H019 292 aa12.34□□□□□ -0.43
TM2D3-214ENST00000561356 HAP1P54257 671 aaPredicted RBP12.33□□□□□ -0.44
TM2D3-214ENST00000561356 KLRG1Q96E93 195 aa12.33□□□□□ -0.44
TM2D3-214ENST00000561356 RRBP1Q9P2E9 1410 aaKnown RBP12.33□□□□□ -0.44
TM2D3-214ENST00000561356 PEAK1Q9H792 1746 aa12.32□□□□□ -0.44
TM2D3-214ENST00000561356 CCDC144AA2RUR9 1427 aa12.32□□□□□ -0.44
TM2D3-214ENST00000561356 PRAG1Q86YV5 1406 aa12.32□□□□□ -0.44
TM2D3-214ENST00000561356 FAM161AQ3B820 660 aa12.32□□□□□ -0.44
TM2D3-214ENST00000561356 PROM2Q8N271 834 aa12.32□□□□□ -0.44
TM2D3-214ENST00000561356 NLGN2Q8NFZ4 835 aa12.32□□□□□ -0.44
TM2D3-214ENST00000561356 TECPR2O15040 1411 aa12.31□□□□□ -0.44
TM2D3-214ENST00000561356 PTF1AQ7RTS3 328 aa12.31□□□□□ -0.44
TM2D3-214ENST00000561356 KIF1AQ12756 1690 aa12.31□□□□□ -0.44
TM2D3-214ENST00000561356 SPATA31A1Q5TZJ5 1347 aa12.31□□□□□ -0.44
TM2D3-214ENST00000561356 LRPPRCP42704 1394 aaKnown RBP12.3□□□□□ -0.44
TM2D3-214ENST00000561356 SBF2Q86WG5 1849 aa12.3□□□□□ -0.44
TM2D3-214ENST00000561356 NUTM2FA1L443 756 aa12.3□□□□□ -0.44
TM2D3-214ENST00000561356 E9PCH4 1651 aa12.29□□□□□ -0.44
TM2D3-214ENST00000561356 CRYBG1Q9Y4K1 1723 aa12.28□□□□□ -0.44
TM2D3-214ENST00000561356 KRT28Q7Z3Y7 464 aa12.28□□□□□ -0.44
TM2D3-214ENST00000561356 BCL11BQ9C0K0 894 aaPredicted RBP12.27□□□□□ -0.45
TM2D3-214ENST00000561356 AATKQ6ZMQ8 1374 aa12.27□□□□□ -0.45
TM2D3-214ENST00000561356 COL24A1Q17RW2 1714 aa12.26□□□□□ -0.45
TM2D3-214ENST00000561356 FMN2Q9NZ56 1722 aa12.26□□□□□ -0.45
TM2D3-214ENST00000561356 HFM1A2PYH4 1435 aa12.26□□□□□ -0.45
TM2D3-214ENST00000561356 PLSCR1O15162 318 aa12.25□□□□□ -0.45
TM2D3-214ENST00000561356 SLC15A2Q16348 729 aa12.25□□□□□ -0.45
TM2D3-214ENST00000561356 KLHL34Q8N239 644 aa12.25□□□□□ -0.45
TM2D3-214ENST00000561356 NAIPQ13075 1403 aa12.25□□□□□ -0.45
TM2D3-214ENST00000561356 KIAA1210Q9ULL0 1709 aa12.25□□□□□ -0.45
TM2D3-214ENST00000561356 PAPPAQ13219 1627 aa12.24□□□□□ -0.45
TM2D3-214ENST00000561356 TNRC18O15417 2968 aaPredicted RBP12.24□□□□□ -0.45
TM2D3-214ENST00000561356 RGPD8O14715 1765 aaPredicted RBP12.23□□□□□ -0.45
TM2D3-214ENST00000561356 MYOM3Q5VTT5 1437 aa12.23□□□□□ -0.45
TM2D3-214ENST00000561356 HSPA1AP0DMV8 641 aaKnown RBP12.23□□□□□ -0.45
TM2D3-214ENST00000561356 HSPA1BP0DMV9 641 aaKnown RBP12.23□□□□□ -0.45
TM2D3-214ENST00000561356 TRPM3Q9HCF6 1732 aaPredicted RBP12.22□□□□□ -0.45
TM2D3-214ENST00000561356 PARP4Q9UKK3 1724 aaKnown RBP12.22□□□□□ -0.45
TM2D3-214ENST00000561356 SBNO1A3KN83 1393 aa12.21□□□□□ -0.45
TM2D3-214ENST00000561356 ARHGEF28Q8N1W1 1705 aaKnown RBP12.21□□□□□ -0.45
TM2D3-214ENST00000561356 PDE3BQ13370 1112 aa12.21□□□□□ -0.45
TM2D3-214ENST00000561356 STK32BQ9NY57 414 aa12.21□□□□□ -0.45
TM2D3-214ENST00000561356 TOPAZ1Q8N9V7 1692 aa12.21□□□□□ -0.45
TM2D3-214ENST00000561356 ALS2Q96Q42 1657 aa12.21□□□□□ -0.45
TM2D3-214ENST00000561356 ARHGEF10O15013 1369 aa12.2□□□□□ -0.46
TM2D3-214ENST00000561356 GRIN3BO60391 1043 aa12.2□□□□□ -0.46
TM2D3-214ENST00000561356 LMOD2Q6P5Q4 547 aa12.19□□□□□ -0.46
TM2D3-214ENST00000561356 USP35Q9P2H5 1018 aa12.19□□□□□ -0.46
TM2D3-214ENST00000561356 PHRF1Q9P1Y6 1649 aaKnown RBP12.19□□□□□ -0.46
TM2D3-214ENST00000561356 DAPK1P53355 1430 aa12.18□□□□□ -0.46
TM2D3-214ENST00000561356 NRXN1Q9ULB1 1477 aa12.17□□□□□ -0.46
TM2D3-214ENST00000561356 TOMM70O94826 608 aa12.17□□□□□ -0.46
TM2D3-214ENST00000561356 BARGINQ6ZT62 677 aa12.17□□□□□ -0.46
TM2D3-214ENST00000561356 LRRC37A3O60309 1634 aa12.17□□□□□ -0.46
TM2D3-214ENST00000561356 OVOS2A0A0G2JMS6 1433 aa12.17□□□□□ -0.46
TM2D3-214ENST00000561356 OVOS2A0A0J9YW53 1432 aa12.17□□□□□ -0.46
TM2D3-214ENST00000561356 OVOS2Q6IE36 1432 aa12.17□□□□□ -0.46
TM2D3-214ENST00000561356 TULP4Q9NRJ4 1543 aa12.16□□□□□ -0.46
TM2D3-214ENST00000561356 ATP7BP35670 1465 aa12.16□□□□□ -0.46
TM2D3-214ENST00000561356 TXNRD1Q16881 649 aa12.16□□□□□ -0.46
TM2D3-214ENST00000561356 CNKSR2Q8WXI2 1034 aa12.16□□□□□ -0.46
TM2D3-214ENST00000561356 STRN4Q9NRL3 753 aa12.15□□□□□ -0.46
TM2D3-214ENST00000561356 SSH2Q76I76 1423 aa12.14□□□□□ -0.47
TM2D3-214ENST00000561356 ZNF827Q17R98 1081 aa12.14□□□□□ -0.47
TM2D3-214ENST00000561356 PLEKHH1Q9ULM0 1364 aa12.14□□□□□ -0.47
TM2D3-214ENST00000561356 IFT172Q9UG01 1749 aa12.14□□□□□ -0.47
TM2D3-214ENST00000561356 CHRNA2Q15822 529 aa12.13□□□□□ -0.47
TM2D3-214ENST00000561356 PRDM11Q9NQV5 511 aa12.12□□□□□ -0.47
TM2D3-214ENST00000561356 CHIC2Q9UKJ5 165 aa12.12□□□□□ -0.47
TM2D3-214ENST00000561356 DHX57Q6P158 1386 aaKnown RBP12.12□□□□□ -0.47
TM2D3-214ENST00000561356 KIAA0232Q92628 1395 aa12.12□□□□□ -0.47
TM2D3-214ENST00000561356 TUBGCP6Q96RT7 1819 aa12.11□□□□□ -0.47
TM2D3-214ENST00000561356 PSME1Q06323 249 aa12.11□□□□□ -0.47
TM2D3-214ENST00000561356 ZNF326Q5BKZ1 582 aaKnown RBP12.11□□□□□ -0.47
TM2D3-214ENST00000561356 PHF8Q9UPP1 1060 aa12.11□□□□□ -0.47
TM2D3-214ENST00000561356 ANKRD30AQ9BXX3 1397 aa12.1□□□□□ -0.47
TM2D3-214ENST00000561356 NPM3O75607 178 aaKnown RBP12.1□□□□□ -0.47
TM2D3-214ENST00000561356 WAPLQ7Z5K2 1190 aa12.1□□□□□ -0.47
TM2D3-214ENST00000561356 SLC4A1APQ9BWU0 796 aaKnown RBP12.1□□□□□ -0.47
TM2D3-214ENST00000561356 NMRK2Q9NPI5 230 aa12.1□□□□□ -0.47
TM2D3-214ENST00000561356 QSER1Q2KHR3 1735 aa12.09□□□□□ -0.47
TM2D3-214ENST00000561356 CLTCL1P53675 1640 aa12.09□□□□□ -0.47
TM2D3-214ENST00000561356 LARP1Q6PKG0 1096 aaKnown RBP12.09□□□□□ -0.47
TM2D3-214ENST00000561356 LMO7Q8WWI1 1683 aa12.08□□□□□ -0.48
TM2D3-214ENST00000561356 MLLT1Q03111 559 aaPredicted RBP12.08□□□□□ -0.48
TM2D3-214ENST00000561356 TCP11L2Q8N4U5 519 aa12.07□□□□□ -0.48
TM2D3-214ENST00000561356 ANKRD50Q9ULJ7 1429 aa12.06□□□□□ -0.48
TM2D3-214ENST00000561356 RBM46Q8TBY0 533 aaKnown RBP12.06□□□□□ -0.48
TM2D3-214ENST00000561356 CICQ96RK0 1608 aaPredicted RBP12.06□□□□□ -0.48
TM2D3-214ENST00000561356 POLD1P28340 1107 aa12.05□□□□□ -0.48
TM2D3-214ENST00000561356 PDE4DIPQ5VU43 2346 aa12.05□□□□□ -0.48
TM2D3-214ENST00000561356 USP19O94966 1318 aa12.05□□□□□ -0.48
TM2D3-214ENST00000561356 WNK3Q9BYP7 1800 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms