RNA–Protein interactions for RNA: ENST00000561298.1

PKNOX2-213, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 4

Gene PKNOX2, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-213ENST00000561298 SPATA31A3Q5VYP0 1347 aa13.29□□□□□ -0.28
PKNOX2-213ENST00000561298 JCADQ9P266 1359 aa13.29□□□□□ -0.28
PKNOX2-213ENST00000561298 LRP6O75581 1613 aa13.28□□□□□ -0.28
PKNOX2-213ENST00000561298 KIF20BQ96Q89 1820 aa13.28□□□□□ -0.28
PKNOX2-213ENST00000561298 A0A1W2PP64 1363 aa13.28□□□□□ -0.28
PKNOX2-213ENST00000561298 LRRC59Q96AG4 307 aaKnown RBP13.27□□□□□ -0.29
PKNOX2-213ENST00000561298 NINLQ9Y2I6 1382 aa13.27□□□□□ -0.29
PKNOX2-213ENST00000561298 PSME1Q06323 249 aa13.26□□□□□ -0.29
PKNOX2-213ENST00000561298 ANKRD36BQ8N2N9 1353 aa13.25□□□□□ -0.29
PKNOX2-213ENST00000561298 KIF7Q2M1P5 1343 aa13.25□□□□□ -0.29
PKNOX2-213ENST00000561298 MIER1Q8N108 512 aa13.25□□□□□ -0.29
PKNOX2-213ENST00000561298 BRD4O60885 1362 aaPredicted RBP13.24□□□□□ -0.29
PKNOX2-213ENST00000561298 KTN1Q86UP2 1357 aaKnown RBP13.24□□□□□ -0.29
PKNOX2-213ENST00000561298 CDCA8Q53HL2 280 aa13.24□□□□□ -0.29
PKNOX2-213ENST00000561298 TMC1Q8TDI8 760 aa13.24□□□□□ -0.29
PKNOX2-213ENST00000561298 ANKRD26Q9UPS8 1709 aa13.24□□□□□ -0.29
PKNOX2-213ENST00000561298 CCDC7Q96M83 1385 aa13.23□□□□□ -0.29
PKNOX2-213ENST00000561298 EDC4Q6P2E9 1401 aaKnown RBP13.22□□□□□ -0.29
PKNOX2-213ENST00000561298 ARHGEF10O15013 1369 aa13.22□□□□□ -0.29
PKNOX2-213ENST00000561298 WASHC2AQ641Q2 1341 aa13.22□□□□□ -0.29
PKNOX2-213ENST00000561298 TTC21BQ7Z4L5 1316 aa13.22□□□□□ -0.29
PKNOX2-213ENST00000561298 ZNF692Q9BU19 519 aaPredicted RBP13.22□□□□□ -0.29
PKNOX2-213ENST00000561298 SLIT3O75094 1523 aa13.22□□□□□ -0.29
PKNOX2-213ENST00000561298 SPATA31A6Q5VVP1 1343 aa13.21□□□□□ -0.29
PKNOX2-213ENST00000561298 RGPD5Q99666 1765 aa13.21□□□□□ -0.29
PKNOX2-213ENST00000561298 PLCH1Q4KWH8 1693 aa13.21□□□□□ -0.3
PKNOX2-213ENST00000561298 LTN1O94822 1766 aa13.2□□□□□ -0.3
PKNOX2-213ENST00000561298 PAK3O75914 559 aaPredicted RBP13.2□□□□□ -0.3
PKNOX2-213ENST00000561298 CARD14Q9BXL6 1004 aa13.2□□□□□ -0.3
PKNOX2-213ENST00000561298 TERF2IPQ9NYB0 399 aa13.2□□□□□ -0.3
PKNOX2-213ENST00000561298 COL18A1P39060 1754 aa13.2□□□□□ -0.3
PKNOX2-213ENST00000561298 USP19O94966 1318 aa13.19□□□□□ -0.3
PKNOX2-213ENST00000561298 DDX10Q13206 875 aaKnown RBP13.19□□□□□ -0.3
PKNOX2-213ENST00000561298 NUTM2GQ5VZR2 741 aa13.19□□□□□ -0.3
PKNOX2-213ENST00000561298 HDGFL2Q7Z4V5 671 aaPredicted RBP13.19□□□□□ -0.3
PKNOX2-213ENST00000561298 CABLES1Q8TDN4 633 aa13.19□□□□□ -0.3
PKNOX2-213ENST00000561298 POLR3GLQ9BT43 218 aa13.19□□□□□ -0.3
PKNOX2-213ENST00000561298 NRAPQ86VF7 1730 aa13.19□□□□□ -0.3
PKNOX2-213ENST00000561298 NFAT5O94916 1531 aa13.18□□□□□ -0.3
PKNOX2-213ENST00000561298 MAP2P11137 1827 aaKnown RBP13.18□□□□□ -0.3
PKNOX2-213ENST00000561298 TTC21AQ8NDW8 1320 aa13.18□□□□□ -0.3
PKNOX2-213ENST00000561298 LMOD2Q6P5Q4 547 aa13.18□□□□□ -0.3
PKNOX2-213ENST00000561298 ZRANB1Q9UGI0 708 aa13.18□□□□□ -0.3
PKNOX2-213ENST00000561298 OVOS2A0A0J9YW53 1432 aa13.18□□□□□ -0.3
PKNOX2-213ENST00000561298 OVOS2Q6IE36 1432 aa13.18□□□□□ -0.3
PKNOX2-213ENST00000561298 NSD3Q9BZ95 1437 aa13.18□□□□□ -0.3
PKNOX2-213ENST00000561298 NWD2Q9ULI1 1742 aa13.18□□□□□ -0.3
PKNOX2-213ENST00000561298 USP31Q70CQ4 1352 aa13.18□□□□□ -0.3
PKNOX2-213ENST00000561298 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.17□□□□□ -0.3
PKNOX2-213ENST00000561298 NUTM2BA6NNL0 878 aaPredicted RBP13.17□□□□□ -0.3
PKNOX2-213ENST00000561298 NUTM2EB1AL46 878 aaPredicted RBP13.17□□□□□ -0.3
PKNOX2-213ENST00000561298 NME9Q86XW9 330 aa13.17□□□□□ -0.3
PKNOX2-213ENST00000561298 NUTM2AQ8IVF1 878 aaPredicted RBP13.17□□□□□ -0.3
PKNOX2-213ENST00000561298 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.17□□□□□ -0.3
PKNOX2-213ENST00000561298 ABTB2Q8N961 1025 aa13.17□□□□□ -0.3
PKNOX2-213ENST00000561298 LMO7Q8WWI1 1683 aa13.17□□□□□ -0.3
PKNOX2-213ENST00000561298 COL14A1Q05707 1796 aaKnown RBP13.17□□□□□ -0.3
PKNOX2-213ENST00000561298 PANK3Q9H999 370 aa13.15□□□□□ -0.3
PKNOX2-213ENST00000561298 PLEKHG5O94827 1062 aa13.14□□□□□ -0.31
PKNOX2-213ENST00000561298 FYB1O15117 783 aa13.13□□□□□ -0.31
PKNOX2-213ENST00000561298 NLRP6P59044 892 aa13.13□□□□□ -0.31
PKNOX2-213ENST00000561298 NLRP13Q86W25 1043 aa13.13□□□□□ -0.31
PKNOX2-213ENST00000561298 SLIT2O94813 1529 aa13.13□□□□□ -0.31
PKNOX2-213ENST00000561298 ADAMTS2O95450 1211 aa13.12□□□□□ -0.31
PKNOX2-213ENST00000561298 RGS17Q9UGC6 210 aaPredicted RBP13.12□□□□□ -0.31
PKNOX2-213ENST00000561298 PEAK1Q9H792 1746 aa13.12□□□□□ -0.31
PKNOX2-213ENST00000561298 CPDO75976 1380 aa13.11□□□□□ -0.31
PKNOX2-213ENST00000561298 KIAA0232Q92628 1395 aa13.11□□□□□ -0.31
PKNOX2-213ENST00000561298 PER1O15534 1290 aaPredicted RBP13.11□□□□□ -0.31
PKNOX2-213ENST00000561298 GCP02774 474 aa13.11□□□□□ -0.31
PKNOX2-213ENST00000561298 RGPD2P0DJD1 1756 aa13.11□□□□□ -0.31
PKNOX2-213ENST00000561298 CAMTA1Q9Y6Y1 1673 aa13.1□□□□□ -0.31
PKNOX2-213ENST00000561298 GGNBP2Q9H3C7 697 aa13.1□□□□□ -0.31
PKNOX2-213ENST00000561298 BCL9LQ86UU0 1499 aa13.1□□□□□ -0.31
PKNOX2-213ENST00000561298 FAM83GA6ND36 823 aa13.09□□□□□ -0.31
PKNOX2-213ENST00000561298 C8orf37Q96NL8 207 aa13.09□□□□□ -0.31
PKNOX2-213ENST00000561298 ABCC6O95255 1503 aa13.08□□□□□ -0.31
PKNOX2-213ENST00000561298 ZC3H6P61129 1189 aaKnown RBP13.08□□□□□ -0.32
PKNOX2-213ENST00000561298 AMER1Q5JTC6 1135 aaPredicted RBP13.08□□□□□ -0.32
PKNOX2-213ENST00000561298 MEX3CQ5U5Q3 659 aaKnown RBP13.08□□□□□ -0.32
PKNOX2-213ENST00000561298 FNBP4Q8N3X1 1017 aaPredicted RBP13.08□□□□□ -0.32
PKNOX2-213ENST00000561298 AFF2P51816 1311 aa13.08□□□□□ -0.32
PKNOX2-213ENST00000561298 CGNL1Q0VF96 1302 aa13.08□□□□□ -0.32
PKNOX2-213ENST00000561298 WNK3Q9BYP7 1800 aa13.07□□□□□ -0.32
PKNOX2-213ENST00000561298 FBLN1P23142 703 aa13.07□□□□□ -0.32
PKNOX2-213ENST00000561298 CHRNA2Q15822 529 aa13.07□□□□□ -0.32
PKNOX2-213ENST00000561298 HAP1P54257 671 aaPredicted RBP13.06□□□□□ -0.32
PKNOX2-213ENST00000561298 ARHGEF25Q86VW2 580 aa13.06□□□□□ -0.32
PKNOX2-213ENST00000561298 COG3Q96JB2 828 aa13.06□□□□□ -0.32
PKNOX2-213ENST00000561298 GLI3P10071 1580 aa13.06□□□□□ -0.32
PKNOX2-213ENST00000561298 NSD2O96028 1365 aa13.06□□□□□ -0.32
PKNOX2-213ENST00000561298 ATRNO75882 1429 aa13.05□□□□□ -0.32
PKNOX2-213ENST00000561298 SOX12O15370 315 aa13.05□□□□□ -0.32
PKNOX2-213ENST00000561298 KCNH5Q8NCM2 988 aa13.05□□□□□ -0.32
PKNOX2-213ENST00000561298 NGLY1Q96IV0 654 aa13.05□□□□□ -0.32
PKNOX2-213ENST00000561298 AATKQ6ZMQ8 1374 aa13.05□□□□□ -0.32
PKNOX2-213ENST00000561298 NPC1L1Q9UHC9 1359 aa13.05□□□□□ -0.32
PKNOX2-213ENST00000561298 BRWD3Q6RI45 1802 aa13.04□□□□□ -0.32
PKNOX2-213ENST00000561298 POTEAQ6S8J7 498 aa13.04□□□□□ -0.32
PKNOX2-213ENST00000561298 PRDM11Q9NQV5 511 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms