RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 NUTM2GQ5VZR2 741 aa19.62■□□□□ 0.73
TPM1-230ENST00000561266 CD163L1Q9NR16 1453 aa19.61■□□□□ 0.73
TPM1-230ENST00000561266 ARHGEF10O15013 1369 aa19.61■□□□□ 0.73
TPM1-230ENST00000561266 USP6P35125 1406 aa19.6■□□□□ 0.73
TPM1-230ENST00000561266 SSH2Q76I76 1423 aa19.6■□□□□ 0.73
TPM1-230ENST00000561266 ATAD2Q6PL18 1390 aa19.6■□□□□ 0.73
TPM1-230ENST00000561266 SLC12A5Q9H2X9 1139 aa19.6■□□□□ 0.73
TPM1-230ENST00000561266 CPSF1Q10570 1443 aaKnown RBP19.59■□□□□ 0.73
TPM1-230ENST00000561266 NGLY1Q96IV0 654 aa19.58■□□□□ 0.72
TPM1-230ENST00000561266 NRKQ7Z2Y5 1582 aa19.57■□□□□ 0.72
TPM1-230ENST00000561266 MON2Q7Z3U7 1717 aa19.57■□□□□ 0.72
TPM1-230ENST00000561266 PHRF1Q9P1Y6 1649 aaKnown RBP19.57■□□□□ 0.72
TPM1-230ENST00000561266 PIK3C2AO00443 1686 aa19.56■□□□□ 0.72
TPM1-230ENST00000561266 HSPA5P11021 654 aaKnown RBP19.55■□□□□ 0.72
TPM1-230ENST00000561266 FNBP4Q8N3X1 1017 aaPredicted RBP19.55■□□□□ 0.72
TPM1-230ENST00000561266 TMC1Q8TDI8 760 aa19.55■□□□□ 0.72
TPM1-230ENST00000561266 PUS7Q96PZ0 661 aaKnown RBP19.55■□□□□ 0.72
TPM1-230ENST00000561266 BCL9LQ86UU0 1499 aa19.54■□□□□ 0.72
TPM1-230ENST00000561266 FAM83GA6ND36 823 aa19.54■□□□□ 0.72
TPM1-230ENST00000561266 ABTB2Q8N961 1025 aa19.54■□□□□ 0.72
TPM1-230ENST00000561266 PLCH1Q4KWH8 1693 aa19.53■□□□□ 0.72
TPM1-230ENST00000561266 ZNF772Q68DY9 489 aaPredicted RBP19.53■□□□□ 0.72
TPM1-230ENST00000561266 TTC21BQ7Z4L5 1316 aa19.52■□□□□ 0.72
TPM1-230ENST00000561266 SLIT2O94813 1529 aa19.52■□□□□ 0.72
TPM1-230ENST00000561266 TMF1P82094 1093 aa19.52■□□□□ 0.72
TPM1-230ENST00000561266 ZRANB1Q9UGI0 708 aa19.52■□□□□ 0.72
TPM1-230ENST00000561266 USP21Q9UK80 565 aa19.52■□□□□ 0.72
TPM1-230ENST00000561266 KTN1Q86UP2 1357 aaKnown RBP19.52■□□□□ 0.72
TPM1-230ENST00000561266 MYOM1P52179 1685 aa19.52■□□□□ 0.71
TPM1-230ENST00000561266 HAP1P54257 671 aaPredicted RBP19.51■□□□□ 0.71
TPM1-230ENST00000561266 ZNF692Q9BU19 519 aaPredicted RBP19.51■□□□□ 0.71
TPM1-230ENST00000561266 QTRT2Q9H974 415 aaKnown RBP19.51■□□□□ 0.71
TPM1-230ENST00000561266 A0A1W2PP64 1363 aa19.51■□□□□ 0.71
TPM1-230ENST00000561266 USP19O94966 1318 aa19.51■□□□□ 0.71
TPM1-230ENST00000561266 EIF4G2P78344 907 aaKnown RBP eCLIP19.5■□□□□ 0.71
TPM1-230ENST00000561266 BRD4O60885 1362 aaPredicted RBP19.49■□□□□ 0.71
TPM1-230ENST00000561266 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.48■□□□□ 0.71
TPM1-230ENST00000561266 C11orf95C9JLR9 678 aaPredicted RBP19.48■□□□□ 0.71
TPM1-230ENST00000561266 ZC3H6P61129 1189 aaKnown RBP19.48■□□□□ 0.71
TPM1-230ENST00000561266 ATRNO75882 1429 aa19.48■□□□□ 0.71
TPM1-230ENST00000561266 NRAPQ86VF7 1730 aa19.48■□□□□ 0.71
TPM1-230ENST00000561266 NLRP6P59044 892 aa19.47■□□□□ 0.71
TPM1-230ENST00000561266 CHRNA2Q15822 529 aa19.47■□□□□ 0.71
TPM1-230ENST00000561266 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.47■□□□□ 0.71
TPM1-230ENST00000561266 NWD2Q9ULI1 1742 aa19.47■□□□□ 0.71
TPM1-230ENST00000561266 COL14A1Q05707 1796 aaKnown RBP19.47■□□□□ 0.71
TPM1-230ENST00000561266 SLIT3O75094 1523 aa19.46■□□□□ 0.71
TPM1-230ENST00000561266 KIAA0232Q92628 1395 aa19.46■□□□□ 0.71
TPM1-230ENST00000561266 NLRP13Q86W25 1043 aa19.46■□□□□ 0.71
TPM1-230ENST00000561266 NME9Q86XW9 330 aa19.46■□□□□ 0.71
TPM1-230ENST00000561266 GCP02774 474 aa19.45■□□□□ 0.7
TPM1-230ENST00000561266 UNC5CLQ8IV45 518 aa19.45■□□□□ 0.7
TPM1-230ENST00000561266 SLC24A1O60721 1099 aa19.44■□□□□ 0.7
TPM1-230ENST00000561266 RXRBP28702 533 aa19.44■□□□□ 0.7
TPM1-230ENST00000561266 HDGFL2Q7Z4V5 671 aaPredicted RBP19.44■□□□□ 0.7
TPM1-230ENST00000561266 TTC21AQ8NDW8 1320 aa19.44■□□□□ 0.7
TPM1-230ENST00000561266 EDC4Q6P2E9 1401 aaKnown RBP19.43■□□□□ 0.7
TPM1-230ENST00000561266 USP54Q70EL1 1684 aa19.43■□□□□ 0.7
TPM1-230ENST00000561266 TERF2IPQ9NYB0 399 aa19.43■□□□□ 0.7
TPM1-230ENST00000561266 TRPC5Q9UL62 973 aaPredicted RBP19.43■□□□□ 0.7
TPM1-230ENST00000561266 GLI3P10071 1580 aa19.43■□□□□ 0.7
TPM1-230ENST00000561266 NINLQ9Y2I6 1382 aa19.43■□□□□ 0.7
TPM1-230ENST00000561266 CARD14Q9BXL6 1004 aa19.42■□□□□ 0.7
TPM1-230ENST00000561266 PRDM11Q9NQV5 511 aa19.42■□□□□ 0.7
TPM1-230ENST00000561266 BTG4Q9NY30 223 aa19.42■□□□□ 0.7
TPM1-230ENST00000561266 LMO7Q8WWI1 1683 aa19.42■□□□□ 0.7
TPM1-230ENST00000561266 ANKRD36BQ8N2N9 1353 aa19.42■□□□□ 0.7
TPM1-230ENST00000561266 COL18A1P39060 1754 aa19.42■□□□□ 0.7
TPM1-230ENST00000561266 RBM6P78332 1123 aaKnown RBP19.41■□□□□ 0.7
TPM1-230ENST00000561266 CAMTA1Q9Y6Y1 1673 aa19.4■□□□□ 0.7
TPM1-230ENST00000561266 RGPD5Q99666 1765 aa19.4■□□□□ 0.7
TPM1-230ENST00000561266 SOCS7O14512 581 aa19.4■□□□□ 0.7
TPM1-230ENST00000561266 USP31Q70CQ4 1352 aa19.4■□□□□ 0.7
TPM1-230ENST00000561266 RGS12O14924 1447 aa19.4■□□□□ 0.7
TPM1-230ENST00000561266 NFAT5O94916 1531 aa19.4■□□□□ 0.7
TPM1-230ENST00000561266 SOX12O15370 315 aa19.39■□□□□ 0.69
TPM1-230ENST00000561266 CDCA8Q53HL2 280 aa19.39■□□□□ 0.69
TPM1-230ENST00000561266 GJD4Q96KN9 370 aaPredicted RBP19.39■□□□□ 0.69
TPM1-230ENST00000561266 POLR3GLQ9BT43 218 aa19.39■□□□□ 0.69
TPM1-230ENST00000561266 CPDO75976 1380 aa19.39■□□□□ 0.69
TPM1-230ENST00000561266 CDK12Q9NYV4 1490 aaPredicted RBP19.37■□□□□ 0.69
TPM1-230ENST00000561266 OVOS2A0A0J9YW53 1432 aa19.37■□□□□ 0.69
TPM1-230ENST00000561266 OVOS2Q6IE36 1432 aa19.37■□□□□ 0.69
TPM1-230ENST00000561266 VPS72Q15906 364 aa19.37■□□□□ 0.69
TPM1-230ENST00000561266 ZBTB7CA1YPR0 619 aa19.36■□□□□ 0.69
TPM1-230ENST00000561266 FBLN1P23142 703 aa19.36■□□□□ 0.69
TPM1-230ENST00000561266 ARHGEF25Q86VW2 580 aa19.35■□□□□ 0.69
TPM1-230ENST00000561266 AXIN2Q9Y2T1 843 aa19.35■□□□□ 0.69
TPM1-230ENST00000561266 BRWD3Q6RI45 1802 aa19.35■□□□□ 0.69
TPM1-230ENST00000561266 FYB1O15117 783 aa19.34■□□□□ 0.69
TPM1-230ENST00000561266 KIF20BQ96Q89 1820 aa19.34■□□□□ 0.69
TPM1-230ENST00000561266 LTN1O94822 1766 aa19.34■□□□□ 0.69
TPM1-230ENST00000561266 STRN4Q9NRL3 753 aa19.33■□□□□ 0.68
TPM1-230ENST00000561266 KIF7Q2M1P5 1343 aa19.32■□□□□ 0.68
TPM1-230ENST00000561266 GGNBP2Q9H3C7 697 aa19.32■□□□□ 0.68
TPM1-230ENST00000561266 NSD3Q9BZ95 1437 aa19.32■□□□□ 0.68
TPM1-230ENST00000561266 AATKQ6ZMQ8 1374 aa19.32■□□□□ 0.68
TPM1-230ENST00000561266 SPATA31A5Q5VU36 1347 aa19.31■□□□□ 0.68
TPM1-230ENST00000561266 SPATA31A7Q8IWB4 1347 aa19.31■□□□□ 0.68
TPM1-230ENST00000561266 LARP1Q6PKG0 1096 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms