RNA–Protein interactions for RNA: ENST00000561218.5

CRTC3-212, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 3

Gene CRTC3, Length 579 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-212ENST00000561218 ACEP12821 1306 aa23.52■■□□□ 1.36
CRTC3-212ENST00000561218 ALS2Q96Q42 1657 aa23.51■■□□□ 1.35
CRTC3-212ENST00000561218 PLEKHG3A1L390 1219 aa23.51■■□□□ 1.35
CRTC3-212ENST00000561218 SRPK2P78362 688 aaKnown RBP23.51■■□□□ 1.35
CRTC3-212ENST00000561218 NBPF8Q3BBV2 869 aa23.51■■□□□ 1.35
CRTC3-212ENST00000561218 PRDM11Q9NQV5 511 aa23.5■■□□□ 1.35
CRTC3-212ENST00000561218 ITSN1Q15811 1721 aa23.5■■□□□ 1.35
CRTC3-212ENST00000561218 NWD2Q9ULI1 1742 aa23.5■■□□□ 1.35
CRTC3-212ENST00000561218 PLCH1Q4KWH8 1693 aa23.49■■□□□ 1.35
CRTC3-212ENST00000561218 ONECUT3O60422 494 aaPredicted RBP23.49■■□□□ 1.35
CRTC3-212ENST00000561218 A0A0G2JS52 829 aa23.48■■□□□ 1.35
CRTC3-212ENST00000561218 MYT1Q01538 1121 aa23.48■■□□□ 1.35
CRTC3-212ENST00000561218 POLR3AO14802 1390 aaPredicted RBP23.48■■□□□ 1.35
CRTC3-212ENST00000561218 NUTM2GQ5VZR2 741 aa23.47■■□□□ 1.35
CRTC3-212ENST00000561218 CABP2Q9NPB3 220 aa23.46■■□□□ 1.35
CRTC3-212ENST00000561218 FAM98CQ17RN3 349 aaKnown RBP23.44■■□□□ 1.34
CRTC3-212ENST00000561218 KRT27Q7Z3Y8 459 aa23.44■■□□□ 1.34
CRTC3-212ENST00000561218 ABTB2Q8N961 1025 aa23.44■■□□□ 1.34
CRTC3-212ENST00000561218 COL14A1Q05707 1796 aaKnown RBP23.44■■□□□ 1.34
CRTC3-212ENST00000561218 EP400Q96L91 3159 aa23.43■■□□□ 1.34
CRTC3-212ENST00000561218 KIAA0232Q92628 1395 aa23.42■■□□□ 1.34
CRTC3-212ENST00000561218 ZC3H6P61129 1189 aaKnown RBP23.42■■□□□ 1.34
CRTC3-212ENST00000561218 CHRNA2Q15822 529 aa23.42■■□□□ 1.34
CRTC3-212ENST00000561218 PPIP5K1Q6PFW1 1433 aa23.42■■□□□ 1.34
CRTC3-212ENST00000561218 SF3B2Q13435 895 aaKnown RBP23.41■■□□□ 1.34
CRTC3-212ENST00000561218 BLMP54132 1417 aaPredicted RBP23.41■■□□□ 1.34
CRTC3-212ENST00000561218 SPATA31A5Q5VU36 1347 aa23.4■■□□□ 1.34
CRTC3-212ENST00000561218 SPATA31A7Q8IWB4 1347 aa23.4■■□□□ 1.34
CRTC3-212ENST00000561218 ZRANB1Q9UGI0 708 aa23.4■■□□□ 1.34
CRTC3-212ENST00000561218 TOPAZ1Q8N9V7 1692 aa23.4■■□□□ 1.34
CRTC3-212ENST00000561218 ROCK2O75116 1388 aaKnown RBP23.4■■□□□ 1.34
CRTC3-212ENST00000561218 EVC2Q86UK5 1308 aa23.38■■□□□ 1.33
CRTC3-212ENST00000561218 CABP1Q9NZU7 370 aa23.38■■□□□ 1.33
CRTC3-212ENST00000561218 NRAPQ86VF7 1730 aa23.38■■□□□ 1.33
CRTC3-212ENST00000561218 CRYBG1Q9Y4K1 1723 aa23.37■■□□□ 1.33
CRTC3-212ENST00000561218 NLRP13Q86W25 1043 aa23.37■■□□□ 1.33
CRTC3-212ENST00000561218 STRN4Q9NRL3 753 aa23.37■■□□□ 1.33
CRTC3-212ENST00000561218 BRWD3Q6RI45 1802 aa23.37■■□□□ 1.33
CRTC3-212ENST00000561218 QRICH2Q9H0J4 1663 aa23.36■■□□□ 1.33
CRTC3-212ENST00000561218 EVA1CP58658 441 aa23.36■■□□□ 1.33
CRTC3-212ENST00000561218 DEFB132Q7Z7B7 95 aa23.34■■□□□ 1.33
CRTC3-212ENST00000561218 BRD4O60885 1362 aaPredicted RBP23.34■■□□□ 1.33
CRTC3-212ENST00000561218 TRPM1Q7Z4N2 1603 aa23.33■■□□□ 1.33
CRTC3-212ENST00000561218 USP19O94966 1318 aa23.33■■□□□ 1.32
CRTC3-212ENST00000561218 SPATA31A1Q5TZJ5 1347 aa23.33■■□□□ 1.32
CRTC3-212ENST00000561218 GCP02774 474 aa23.32■■□□□ 1.32
CRTC3-212ENST00000561218 PHRF1Q9P1Y6 1649 aaKnown RBP23.32■■□□□ 1.32
CRTC3-212ENST00000561218 CPDO75976 1380 aa23.3■■□□□ 1.32
CRTC3-212ENST00000561218 NLRP6P59044 892 aa23.3■■□□□ 1.32
CRTC3-212ENST00000561218 USP35Q9P2H5 1018 aa23.3■■□□□ 1.32
CRTC3-212ENST00000561218 USP6P35125 1406 aa23.3■■□□□ 1.32
CRTC3-212ENST00000561218 FAM182BQ5T319 152 aa23.28■■□□□ 1.32
CRTC3-212ENST00000561218 ZNF692Q9BU19 519 aaPredicted RBP23.27■■□□□ 1.32
CRTC3-212ENST00000561218 SSH2Q76I76 1423 aa23.26■■□□□ 1.31
CRTC3-212ENST00000561218 ZBTB7CA1YPR0 619 aa23.26■■□□□ 1.31
CRTC3-212ENST00000561218 BAG6P46379 1132 aa23.26■■□□□ 1.31
CRTC3-212ENST00000561218 LARP1Q6PKG0 1096 aaKnown RBP23.26■■□□□ 1.31
CRTC3-212ENST00000561218 CARD11Q9BXL7 1154 aa23.26■■□□□ 1.31
CRTC3-212ENST00000561218 NRKQ7Z2Y5 1582 aa23.26■■□□□ 1.31
CRTC3-212ENST00000561218 TONSLQ96HA7 1378 aa23.26■■□□□ 1.31
CRTC3-212ENST00000561218 CAMTA1Q9Y6Y1 1673 aa23.24■■□□□ 1.31
CRTC3-212ENST00000561218 BARGINQ6ZT62 677 aa23.23■■□□□ 1.31
CRTC3-212ENST00000561218 TRIM26Q12899 539 aaPredicted RBP23.22■■□□□ 1.31
CRTC3-212ENST00000561218 TCP11L2Q8N4U5 519 aa23.22■■□□□ 1.31
CRTC3-212ENST00000561218 THSD7AQ9UPZ6 1657 aa23.22■■□□□ 1.31
CRTC3-212ENST00000561218 PDE3BQ13370 1112 aa23.21■■□□□ 1.31
CRTC3-212ENST00000561218 FAM196AQ6ZSG2 479 aa23.21■■□□□ 1.31
CRTC3-212ENST00000561218 TTC21BQ7Z4L5 1316 aa23.21■■□□□ 1.31
CRTC3-212ENST00000561218 SRCAPQ6ZRS2 3230 aa23.19■■□□□ 1.3
CRTC3-212ENST00000561218 THRAP3Q9Y2W1 955 aaKnown RBP23.19■■□□□ 1.3
CRTC3-212ENST00000561218 AATKQ6ZMQ8 1374 aa23.18■■□□□ 1.3
CRTC3-212ENST00000561218 SBNO2Q9Y2G9 1366 aa23.18■■□□□ 1.3
CRTC3-212ENST00000561218 TTC21AQ8NDW8 1320 aa23.18■■□□□ 1.3
CRTC3-212ENST00000561218 KTN1Q86UP2 1357 aaKnown RBP23.17■■□□□ 1.3
CRTC3-212ENST00000561218 LMO7Q8WWI1 1683 aa23.17■■□□□ 1.3
CRTC3-212ENST00000561218 EN1Q05925 392 aaPredicted RBP23.17■■□□□ 1.3
CRTC3-212ENST00000561218 KCNH5Q8NCM2 988 aa23.17■■□□□ 1.3
CRTC3-212ENST00000561218 SLIT3O75094 1523 aa23.16■■□□□ 1.3
CRTC3-212ENST00000561218 COL5A2P05997 1499 aaPredicted RBP23.16■■□□□ 1.3
CRTC3-212ENST00000561218 SOX12O15370 315 aa23.15■■□□□ 1.3
CRTC3-212ENST00000561218 TRIM37O94972 964 aa23.15■■□□□ 1.3
CRTC3-212ENST00000561218 TMC1Q8TDI8 760 aa23.15■■□□□ 1.3
CRTC3-212ENST00000561218 CPSF1Q10570 1443 aaKnown RBP23.15■■□□□ 1.3
CRTC3-212ENST00000561218 PIK3C2AO00443 1686 aa23.13■■□□□ 1.29
CRTC3-212ENST00000561218 TOM1L2Q6ZVM7 507 aa23.13■■□□□ 1.29
CRTC3-212ENST00000561218 CRB1P82279 1406 aa23.13■■□□□ 1.29
CRTC3-212ENST00000561218 ARHGEF25Q86VW2 580 aa23.12■■□□□ 1.29
CRTC3-212ENST00000561218 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.12■■□□□ 1.29
CRTC3-212ENST00000561218 RGPD1P0DJD0 1748 aa23.11■■□□□ 1.29
CRTC3-212ENST00000561218 AXIN2Q9Y2T1 843 aa23.11■■□□□ 1.29
CRTC3-212ENST00000561218 APBA3O96018 575 aa23.1■■□□□ 1.29
CRTC3-212ENST00000561218 HDGFL2Q7Z4V5 671 aaPredicted RBP23.1■■□□□ 1.29
CRTC3-212ENST00000561218 DISP2A7MBM2 1401 aa23.09■■□□□ 1.29
CRTC3-212ENST00000561218 PSDA5PKW4 1024 aaPredicted RBP23.09■■□□□ 1.29
CRTC3-212ENST00000561218 SLC12A5Q9H2X9 1139 aa23.09■■□□□ 1.29
CRTC3-212ENST00000561218 AKAP12Q02952 1782 aa23.09■■□□□ 1.29
CRTC3-212ENST00000561218 CSB-PGBD3P0DP91 1061 aa23.08■■□□□ 1.29
CRTC3-212ENST00000561218 EZH2Q15910 746 aaKnown RBP23.08■■□□□ 1.29
CRTC3-212ENST00000561218 WDR17Q8IZU2 1322 aa23.08■■□□□ 1.28
CRTC3-212ENST00000561218 PUS7Q96PZ0 661 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms