RNA–Protein interactions for RNA: ENST00000561081.5

LRRC49-227, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2

Gene LRRC49, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-227ENST00000561081 PLEKHF1Q96S99 279 aa13.85□□□□□ -0.19
LRRC49-227ENST00000561081 BCAR3O75815 825 aa13.84□□□□□ -0.19
LRRC49-227ENST00000561081 U2SURPO15042 1029 aaKnown RBP13.84□□□□□ -0.19
LRRC49-227ENST00000561081 SLIT1O75093 1534 aa13.84□□□□□ -0.19
LRRC49-227ENST00000561081 MON2Q7Z3U7 1717 aa13.83□□□□□ -0.19
LRRC49-227ENST00000561081 CCDC61Q9Y6R9 512 aa13.83□□□□□ -0.2
LRRC49-227ENST00000561081 ARHGAP23Q9P227 1491 aa13.83□□□□□ -0.2
LRRC49-227ENST00000561081 DIAPH1O60610 1272 aaKnown RBP13.82□□□□□ -0.2
LRRC49-227ENST00000561081 AKAP12Q02952 1782 aa13.82□□□□□ -0.2
LRRC49-227ENST00000561081 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.82□□□□□ -0.2
LRRC49-227ENST00000561081 NCKAP5LQ9HCH0 1330 aa13.81□□□□□ -0.2
LRRC49-227ENST00000561081 POLKQ9UBT6 870 aa13.81□□□□□ -0.2
LRRC49-227ENST00000561081 EID1Q9Y6B2 187 aa13.81□□□□□ -0.2
LRRC49-227ENST00000561081 ITSN1Q15811 1721 aa13.81□□□□□ -0.2
LRRC49-227ENST00000561081 PRR36Q9H6K5 1346 aa13.8□□□□□ -0.2
LRRC49-227ENST00000561081 MAP2P11137 1827 aaKnown RBP13.8□□□□□ -0.2
LRRC49-227ENST00000561081 PTPRUQ92729 1446 aa13.8□□□□□ -0.2
LRRC49-227ENST00000561081 TCERG1O14776 1098 aaKnown RBP13.79□□□□□ -0.2
LRRC49-227ENST00000561081 TMPOP42166 694 aaKnown RBP13.79□□□□□ -0.2
LRRC49-227ENST00000561081 NME9Q86XW9 330 aa13.79□□□□□ -0.2
LRRC49-227ENST00000561081 KDM2BQ8NHM5 1336 aa13.79□□□□□ -0.2
LRRC49-227ENST00000561081 TRHP20396 242 aaPredicted RBP13.79□□□□□ -0.2
LRRC49-227ENST00000561081 FBLN1P23142 703 aa13.79□□□□□ -0.2
LRRC49-227ENST00000561081 MYH16Q9H6N6 1097 aa13.79□□□□□ -0.2
LRRC49-227ENST00000561081 TOPAZ1Q8N9V7 1692 aa13.79□□□□□ -0.2
LRRC49-227ENST00000561081 MAPK8IP3Q9UPT6 1336 aa13.79□□□□□ -0.2
LRRC49-227ENST00000561081 SLC26A8Q96RN1 970 aa13.78□□□□□ -0.2
LRRC49-227ENST00000561081 PNNQ9H307 717 aaKnown RBP13.78□□□□□ -0.2
LRRC49-227ENST00000561081 AATKQ6ZMQ8 1374 aa13.78□□□□□ -0.2
LRRC49-227ENST00000561081 RARSP54136 660 aaKnown RBP13.78□□□□□ -0.2
LRRC49-227ENST00000561081 ZNF692Q9BU19 519 aaPredicted RBP13.78□□□□□ -0.2
LRRC49-227ENST00000561081 TRIM35Q9UPQ4 493 aa13.78□□□□□ -0.2
LRRC49-227ENST00000561081 PDE3AQ14432 1141 aa13.77□□□□□ -0.2
LRRC49-227ENST00000561081 PLPPR3Q6T4P5 718 aa13.77□□□□□ -0.21
LRRC49-227ENST00000561081 LRRC7Q96NW7 1537 aa13.77□□□□□ -0.21
LRRC49-227ENST00000561081 FCHSD2O94868 740 aa13.77□□□□□ -0.21
LRRC49-227ENST00000561081 THEMISQ8N1K5 641 aaPredicted RBP13.77□□□□□ -0.21
LRRC49-227ENST00000561081 ZRANB1Q9UGI0 708 aa13.77□□□□□ -0.21
LRRC49-227ENST00000561081 TBX22Q9Y458 520 aa13.77□□□□□ -0.21
LRRC49-227ENST00000561081 CDK12Q9NYV4 1490 aaPredicted RBP13.76□□□□□ -0.21
LRRC49-227ENST00000561081 PPM1GO15355 546 aaPredicted RBP13.76□□□□□ -0.21
LRRC49-227ENST00000561081 MSH5O43196 834 aa13.76□□□□□ -0.21
LRRC49-227ENST00000561081 DIP2AQ14689 1571 aa13.76□□□□□ -0.21
LRRC49-227ENST00000561081 NRKQ7Z2Y5 1582 aa13.76□□□□□ -0.21
LRRC49-227ENST00000561081 CENPQQ7L2Z9 268 aaPredicted RBP13.76□□□□□ -0.21
LRRC49-227ENST00000561081 MS4A1P11836 297 aa13.75□□□□□ -0.21
LRRC49-227ENST00000561081 COG3Q96JB2 828 aa13.75□□□□□ -0.21
LRRC49-227ENST00000561081 EMILIN1Q9Y6C2 1016 aa13.75□□□□□ -0.21
LRRC49-227ENST00000561081 AMOTL2Q9Y2J4 779 aa13.75□□□□□ -0.21
LRRC49-227ENST00000561081 PTCH1Q13635 1447 aa13.75□□□□□ -0.21
LRRC49-227ENST00000561081 IL16Q14005 1332 aa13.75□□□□□ -0.21
LRRC49-227ENST00000561081 RSPH6AQ9H0K4 717 aa13.75□□□□□ -0.21
LRRC49-227ENST00000561081 PLEKHG3A1L390 1219 aa13.74□□□□□ -0.21
LRRC49-227ENST00000561081 CANXP27824 592 aaKnown RBP13.74□□□□□ -0.21
LRRC49-227ENST00000561081 RIPK4P57078 832 aa13.74□□□□□ -0.21
LRRC49-227ENST00000561081 IL13P35225 146 aa13.73□□□□□ -0.21
LRRC49-227ENST00000561081 ACEP12821 1306 aa13.73□□□□□ -0.21
LRRC49-227ENST00000561081 CT47B1P0C2W7 299 aaPredicted RBP13.72□□□□□ -0.21
LRRC49-227ENST00000561081 TSR2Q969E8 191 aaKnown RBP13.72□□□□□ -0.21
LRRC49-227ENST00000561081 PRKAR2BP31323 418 aa13.72□□□□□ -0.21
LRRC49-227ENST00000561081 PANK1Q8TE04 598 aa13.72□□□□□ -0.21
LRRC49-227ENST00000561081 FRAT1Q92837 279 aaPredicted RBP13.72□□□□□ -0.21
LRRC49-227ENST00000561081 TTC21BQ7Z4L5 1316 aa13.72□□□□□ -0.21
LRRC49-227ENST00000561081 CEP170BQ9Y4F5 1589 aaPredicted RBP13.71□□□□□ -0.21
LRRC49-227ENST00000561081 XRN1Q8IZH2 1706 aaKnown RBP13.71□□□□□ -0.21
LRRC49-227ENST00000561081 USP6P35125 1406 aa13.71□□□□□ -0.22
LRRC49-227ENST00000561081 SKAP1Q86WV1 359 aa13.71□□□□□ -0.22
LRRC49-227ENST00000561081 NUTM2FA1L443 756 aa13.7□□□□□ -0.22
LRRC49-227ENST00000561081 RRS1Q15050 365 aaKnown RBP13.7□□□□□ -0.22
LRRC49-227ENST00000561081 COG6Q9Y2V7 657 aa13.7□□□□□ -0.22
LRRC49-227ENST00000561081 PDE4AP27815 886 aa13.7□□□□□ -0.22
LRRC49-227ENST00000561081 ANP32EQ9BTT0 268 aa13.7□□□□□ -0.22
LRRC49-227ENST00000561081 HMOX1P09601 288 aa13.7□□□□□ -0.22
LRRC49-227ENST00000561081 EXOSC9Q06265 439 aaKnown RBP13.7□□□□□ -0.22
LRRC49-227ENST00000561081 BCL2L13Q9BXK5 485 aa13.7□□□□□ -0.22
LRRC49-227ENST00000561081 OVOS2A0A0J9YW53 1432 aa13.69□□□□□ -0.22
LRRC49-227ENST00000561081 OVOS2Q6IE36 1432 aa13.69□□□□□ -0.22
LRRC49-227ENST00000561081 NEFMP07197 916 aa13.69□□□□□ -0.22
LRRC49-227ENST00000561081 PHACTR3Q96KR7 559 aa13.69□□□□□ -0.22
LRRC49-227ENST00000561081 BACH2Q9BYV9 841 aa13.69□□□□□ -0.22
LRRC49-227ENST00000561081 NALCNQ8IZF0 1738 aa13.69□□□□□ -0.22
LRRC49-227ENST00000561081 SSH2Q76I76 1423 aa13.69□□□□□ -0.22
LRRC49-227ENST00000561081 RIMS1Q86UR5 1692 aaKnown RBP13.69□□□□□ -0.22
LRRC49-227ENST00000561081 CLUAP1Q96AJ1 413 aa13.69□□□□□ -0.22
LRRC49-227ENST00000561081 NFE2L2Q16236 605 aa13.68□□□□□ -0.22
LRRC49-227ENST00000561081 RLBP1P12271 317 aa13.68□□□□□ -0.22
LRRC49-227ENST00000561081 AAMPQ13685 434 aa13.67□□□□□ -0.22
LRRC49-227ENST00000561081 TNNQ9UQP3 1299 aa13.67□□□□□ -0.22
LRRC49-227ENST00000561081 PIK3R4Q99570 1358 aa13.66□□□□□ -0.22
LRRC49-227ENST00000561081 RGPD8O14715 1765 aaPredicted RBP13.66□□□□□ -0.22
LRRC49-227ENST00000561081 IGHDP01880 384 aa13.66□□□□□ -0.22
LRRC49-227ENST00000561081 USP31Q70CQ4 1352 aa13.66□□□□□ -0.22
LRRC49-227ENST00000561081 ANP32AP39687 249 aaKnown RBP13.65□□□□□ -0.22
LRRC49-227ENST00000561081 ZKSCAN2Q63HK3 967 aa13.65□□□□□ -0.22
LRRC49-227ENST00000561081 SSH1Q8WYL5 1049 aa13.65□□□□□ -0.23
LRRC49-227ENST00000561081 SMC4Q9NTJ3 1288 aa13.65□□□□□ -0.23
LRRC49-227ENST00000561081 TTC21AQ8NDW8 1320 aa13.65□□□□□ -0.23
LRRC49-227ENST00000561081 ZNF142P52746 1687 aaPredicted RBP13.64□□□□□ -0.23
LRRC49-227ENST00000561081 KCNA6P17658 529 aa13.64□□□□□ -0.23
LRRC49-227ENST00000561081 PMFBP1Q8TBY8 1022 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms