RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 SPATA31A3Q5VYP0 1347 aa12.66□□□□□ -0.38
SNRPA1-214ENST00000560987 PLEKHG3A1L390 1219 aa12.66□□□□□ -0.38
SNRPA1-214ENST00000560987 KIF1AQ12756 1690 aa12.65□□□□□ -0.38
SNRPA1-214ENST00000560987 CABLES1Q8TDN4 633 aa12.65□□□□□ -0.38
SNRPA1-214ENST00000560987 QTRT2Q9H974 415 aaKnown RBP12.65□□□□□ -0.38
SNRPA1-214ENST00000560987 AFF2P51816 1311 aa12.64□□□□□ -0.39
SNRPA1-214ENST00000560987 PPIP5K1Q6PFW1 1433 aa12.64□□□□□ -0.39
SNRPA1-214ENST00000560987 USP32Q8NFA0 1604 aa12.64□□□□□ -0.39
SNRPA1-214ENST00000560987 NUTM2GQ5VZR2 741 aa12.64□□□□□ -0.39
SNRPA1-214ENST00000560987 PXDNQ92626 1479 aa12.64□□□□□ -0.39
SNRPA1-214ENST00000560987 SHPRHQ149N8 1683 aa12.64□□□□□ -0.39
SNRPA1-214ENST00000560987 TMF1P82094 1093 aa12.63□□□□□ -0.39
SNRPA1-214ENST00000560987 ABTB2Q8N961 1025 aa12.63□□□□□ -0.39
SNRPA1-214ENST00000560987 ZNF692Q9BU19 519 aaPredicted RBP12.63□□□□□ -0.39
SNRPA1-214ENST00000560987 SBNO1A3KN83 1393 aa12.63□□□□□ -0.39
SNRPA1-214ENST00000560987 USP47Q96K76 1375 aa12.62□□□□□ -0.39
SNRPA1-214ENST00000560987 POLR3GLQ9BT43 218 aa12.62□□□□□ -0.39
SNRPA1-214ENST00000560987 LRP6O75581 1613 aa12.62□□□□□ -0.39
SNRPA1-214ENST00000560987 ATP7BP35670 1465 aa12.61□□□□□ -0.39
SNRPA1-214ENST00000560987 ARHGEF10O15013 1369 aa12.61□□□□□ -0.39
SNRPA1-214ENST00000560987 RBM6P78332 1123 aaKnown RBP12.61□□□□□ -0.39
SNRPA1-214ENST00000560987 EIF4G2P78344 907 aaKnown RBP eCLIP12.61□□□□□ -0.39
SNRPA1-214ENST00000560987 ITSN1Q15811 1721 aa12.6□□□□□ -0.39
SNRPA1-214ENST00000560987 ATAD2Q6PL18 1390 aa12.6□□□□□ -0.39
SNRPA1-214ENST00000560987 HDGFL2Q7Z4V5 671 aaPredicted RBP12.6□□□□□ -0.39
SNRPA1-214ENST00000560987 TESK2Q96S53 571 aa12.6□□□□□ -0.39
SNRPA1-214ENST00000560987 SLC12A5Q9H2X9 1139 aa12.6□□□□□ -0.39
SNRPA1-214ENST00000560987 TNS3Q68CZ2 1445 aa12.6□□□□□ -0.39
SNRPA1-214ENST00000560987 CDCA8Q53HL2 280 aa12.59□□□□□ -0.39
SNRPA1-214ENST00000560987 NLRP13Q86W25 1043 aa12.59□□□□□ -0.39
SNRPA1-214ENST00000560987 USP21Q9UK80 565 aa12.59□□□□□ -0.39
SNRPA1-214ENST00000560987 POLR3AO14802 1390 aaPredicted RBP12.58□□□□□ -0.4
SNRPA1-214ENST00000560987 NLRP6P59044 892 aa12.58□□□□□ -0.4
SNRPA1-214ENST00000560987 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.58□□□□□ -0.4
SNRPA1-214ENST00000560987 TERF2IPQ9NYB0 399 aa12.58□□□□□ -0.4
SNRPA1-214ENST00000560987 TRPC5Q9UL62 973 aaPredicted RBP12.58□□□□□ -0.4
SNRPA1-214ENST00000560987 SBNO2Q9Y2G9 1366 aa12.57□□□□□ -0.4
SNRPA1-214ENST00000560987 ZBTB7CA1YPR0 619 aa12.57□□□□□ -0.4
SNRPA1-214ENST00000560987 HSPA5P11021 654 aaKnown RBP12.57□□□□□ -0.4
SNRPA1-214ENST00000560987 ZC3H6P61129 1189 aaKnown RBP12.57□□□□□ -0.4
SNRPA1-214ENST00000560987 UPF1Q92900 1129 aaKnown RBP eCLIP12.57□□□□□ -0.4
SNRPA1-214ENST00000560987 PUS7Q96PZ0 661 aaKnown RBP12.57□□□□□ -0.4
SNRPA1-214ENST00000560987 KTN1Q86UP2 1357 aaKnown RBP12.56□□□□□ -0.4
SNRPA1-214ENST00000560987 CCDC9Q9Y3X0 531 aaKnown RBP12.56□□□□□ -0.4
SNRPA1-214ENST00000560987 FAM83GA6ND36 823 aa12.55□□□□□ -0.4
SNRPA1-214ENST00000560987 FNBP4Q8N3X1 1017 aaPredicted RBP12.54□□□□□ -0.4
SNRPA1-214ENST00000560987 TTC21BQ7Z4L5 1316 aa12.54□□□□□ -0.4
SNRPA1-214ENST00000560987 CDK12Q9NYV4 1490 aaPredicted RBP12.53□□□□□ -0.4
SNRPA1-214ENST00000560987 COL22A1Q8NFW1 1626 aaPredicted RBP12.53□□□□□ -0.4
SNRPA1-214ENST00000560987 SOX12O15370 315 aa12.53□□□□□ -0.4
SNRPA1-214ENST00000560987 EVA1CP58658 441 aa12.53□□□□□ -0.4
SNRPA1-214ENST00000560987 UNC5CLQ8IV45 518 aa12.53□□□□□ -0.4
SNRPA1-214ENST00000560987 PRDM11Q9NQV5 511 aa12.53□□□□□ -0.4
SNRPA1-214ENST00000560987 TOPAZ1Q8N9V7 1692 aa12.53□□□□□ -0.4
SNRPA1-214ENST00000560987 BRD4O60885 1362 aaPredicted RBP12.53□□□□□ -0.4
SNRPA1-214ENST00000560987 USP6P35125 1406 aa12.53□□□□□ -0.4
SNRPA1-214ENST00000560987 TRPM3Q9HCF6 1732 aaPredicted RBP12.52□□□□□ -0.41
SNRPA1-214ENST00000560987 GCP02774 474 aa12.52□□□□□ -0.41
SNRPA1-214ENST00000560987 CHRNA2Q15822 529 aa12.52□□□□□ -0.41
SNRPA1-214ENST00000560987 BTG4Q9NY30 223 aa12.52□□□□□ -0.41
SNRPA1-214ENST00000560987 NPM3O75607 178 aaKnown RBP12.51□□□□□ -0.41
SNRPA1-214ENST00000560987 TTC21AQ8NDW8 1320 aa12.51□□□□□ -0.41
SNRPA1-214ENST00000560987 ZRANB1Q9UGI0 708 aa12.5□□□□□ -0.41
SNRPA1-214ENST00000560987 ALS2Q96Q42 1657 aa12.49□□□□□ -0.41
SNRPA1-214ENST00000560987 CPSF1Q10570 1443 aaKnown RBP12.49□□□□□ -0.41
SNRPA1-214ENST00000560987 NME9Q86XW9 330 aa12.49□□□□□ -0.41
SNRPA1-214ENST00000560987 KCNH5Q8NCM2 988 aa12.49□□□□□ -0.41
SNRPA1-214ENST00000560987 STRN4Q9NRL3 753 aa12.49□□□□□ -0.41
SNRPA1-214ENST00000560987 KIAA0232Q92628 1395 aa12.48□□□□□ -0.41
SNRPA1-214ENST00000560987 NINLQ9Y2I6 1382 aa12.48□□□□□ -0.41
SNRPA1-214ENST00000560987 GJD4Q96KN9 370 aaPredicted RBP12.48□□□□□ -0.41
SNRPA1-214ENST00000560987 MARF1Q9Y4F3 1742 aaKnown RBP12.48□□□□□ -0.41
SNRPA1-214ENST00000560987 A0A1W2PP64 1363 aa12.47□□□□□ -0.41
SNRPA1-214ENST00000560987 A0A0G2JS52 829 aa12.47□□□□□ -0.41
SNRPA1-214ENST00000560987 MYT1Q01538 1121 aa12.47□□□□□ -0.41
SNRPA1-214ENST00000560987 CCDC125Q86Z20 511 aa12.47□□□□□ -0.41
SNRPA1-214ENST00000560987 COG3Q96JB2 828 aa12.46□□□□□ -0.41
SNRPA1-214ENST00000560987 BCL9LQ86UU0 1499 aa12.46□□□□□ -0.42
SNRPA1-214ENST00000560987 AKAP12Q02952 1782 aa12.46□□□□□ -0.42
SNRPA1-214ENST00000560987 EDC4Q6P2E9 1401 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-214ENST00000560987 SSH2Q76I76 1423 aa12.45□□□□□ -0.42
SNRPA1-214ENST00000560987 USP19O94966 1318 aa12.45□□□□□ -0.42
SNRPA1-214ENST00000560987 ABCB7O75027 752 aa12.45□□□□□ -0.42
SNRPA1-214ENST00000560987 VPS72Q15906 364 aa12.45□□□□□ -0.42
SNRPA1-214ENST00000560987 USP35Q9P2H5 1018 aa12.45□□□□□ -0.42
SNRPA1-214ENST00000560987 RGS12O14924 1447 aa12.45□□□□□ -0.42
SNRPA1-214ENST00000560987 ANKRD36BQ8N2N9 1353 aa12.44□□□□□ -0.42
SNRPA1-214ENST00000560987 C11orf95C9JLR9 678 aaPredicted RBP12.44□□□□□ -0.42
SNRPA1-214ENST00000560987 GGNBP2Q9H3C7 697 aa12.44□□□□□ -0.42
SNRPA1-214ENST00000560987 PANK3Q9H999 370 aa12.44□□□□□ -0.42
SNRPA1-214ENST00000560987 CD163L1Q9NR16 1453 aa12.44□□□□□ -0.42
SNRPA1-214ENST00000560987 SLIT2O94813 1529 aa12.43□□□□□ -0.42
SNRPA1-214ENST00000560987 CSB-PGBD3P0DP91 1061 aa12.43□□□□□ -0.42
SNRPA1-214ENST00000560987 CARD14Q9BXL6 1004 aa12.43□□□□□ -0.42
SNRPA1-214ENST00000560987 ATRNO75882 1429 aa12.43□□□□□ -0.42
SNRPA1-214ENST00000560987 ABCA3Q99758 1704 aa12.42□□□□□ -0.42
SNRPA1-214ENST00000560987 FYB1O15117 783 aa12.42□□□□□ -0.42
SNRPA1-214ENST00000560987 FAM98CQ17RN3 349 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-214ENST00000560987 ARHGEF25Q86VW2 580 aa12.42□□□□□ -0.42
SNRPA1-214ENST00000560987 COL14A1Q05707 1796 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms