RNA–Protein interactions for RNA: ENST00000560913.1

PPP1R3E-206, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 2

Gene PPP1R3E, Length 932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-206ENST00000560913 NRAPQ86VF7 1730 aa24.9■■□□□ 1.58
PPP1R3E-206ENST00000560913 CDK19Q9BWU1 502 aa24.9■■□□□ 1.58
PPP1R3E-206ENST00000560913 BRWD3Q6RI45 1802 aa24.9■■□□□ 1.58
PPP1R3E-206ENST00000560913 FAM83GA6ND36 823 aa24.89■■□□□ 1.58
PPP1R3E-206ENST00000560913 NGDNQ8NEJ9 315 aaKnown RBP24.89■■□□□ 1.58
PPP1R3E-206ENST00000560913 VPS72Q15906 364 aa24.88■■□□□ 1.57
PPP1R3E-206ENST00000560913 COL14A1Q05707 1796 aaKnown RBP24.87■■□□□ 1.57
PPP1R3E-206ENST00000560913 L3MBTL2Q969R5 705 aa24.86■■□□□ 1.57
PPP1R3E-206ENST00000560913 POLR3AO14802 1390 aaPredicted RBP24.85■■□□□ 1.57
PPP1R3E-206ENST00000560913 TRPM1Q7Z4N2 1603 aa24.83■■□□□ 1.57
PPP1R3E-206ENST00000560913 QRICH2Q9H0J4 1663 aa24.83■■□□□ 1.57
PPP1R3E-206ENST00000560913 ONECUT3O60422 494 aaPredicted RBP24.83■■□□□ 1.57
PPP1R3E-206ENST00000560913 SIN3AQ96ST3 1273 aa24.83■■□□□ 1.57
PPP1R3E-206ENST00000560913 PHRF1Q9P1Y6 1649 aaKnown RBP24.83■■□□□ 1.56
PPP1R3E-206ENST00000560913 PLEKHG3A1L390 1219 aa24.82■■□□□ 1.56
PPP1R3E-206ENST00000560913 CCDC61Q9Y6R9 512 aa24.82■■□□□ 1.56
PPP1R3E-206ENST00000560913 PAK3O75914 559 aaPredicted RBP24.81■■□□□ 1.56
PPP1R3E-206ENST00000560913 ACEP12821 1306 aa24.8■■□□□ 1.56
PPP1R3E-206ENST00000560913 CENPJQ9HC77 1338 aaPredicted RBP24.8■■□□□ 1.56
PPP1R3E-206ENST00000560913 NBPF8Q3BBV2 869 aa24.79■■□□□ 1.56
PPP1R3E-206ENST00000560913 NCBP3Q53F19 620 aaKnown RBP24.79■■□□□ 1.56
PPP1R3E-206ENST00000560913 SEPT12Q8IYM1 358 aa24.79■■□□□ 1.56
PPP1R3E-206ENST00000560913 BTG4Q9NY30 223 aa24.78■■□□□ 1.56
PPP1R3E-206ENST00000560913 CCDC125Q86Z20 511 aa24.77■■□□□ 1.56
PPP1R3E-206ENST00000560913 CCDC9Q9Y3X0 531 aaKnown RBP24.75■■□□□ 1.55
PPP1R3E-206ENST00000560913 HOXD11P31277 338 aaPredicted RBP24.74■■□□□ 1.55
PPP1R3E-206ENST00000560913 PPIP5K1Q6PFW1 1433 aa24.74■■□□□ 1.55
PPP1R3E-206ENST00000560913 KIAA0232Q92628 1395 aa24.72■■□□□ 1.55
PPP1R3E-206ENST00000560913 SRPK2P78362 688 aaKnown RBP24.72■■□□□ 1.55
PPP1R3E-206ENST00000560913 NEUROD1Q13562 356 aa24.72■■□□□ 1.55
PPP1R3E-206ENST00000560913 CABP2Q9NPB3 220 aa24.72■■□□□ 1.55
PPP1R3E-206ENST00000560913 NRKQ7Z2Y5 1582 aa24.71■■□□□ 1.55
PPP1R3E-206ENST00000560913 BLMP54132 1417 aaPredicted RBP24.71■■□□□ 1.55
PPP1R3E-206ENST00000560913 PRDM11Q9NQV5 511 aa24.71■■□□□ 1.55
PPP1R3E-206ENST00000560913 SPATA31A5Q5VU36 1347 aa24.7■■□□□ 1.54
PPP1R3E-206ENST00000560913 SPATA31A7Q8IWB4 1347 aa24.7■■□□□ 1.54
PPP1R3E-206ENST00000560913 NUTM2GQ5VZR2 741 aa24.7■■□□□ 1.54
PPP1R3E-206ENST00000560913 THSD7AQ9UPZ6 1657 aa24.69■■□□□ 1.54
PPP1R3E-206ENST00000560913 RNF216Q9NWF9 866 aaPredicted RBP24.69■■□□□ 1.54
PPP1R3E-206ENST00000560913 FAM98CQ17RN3 349 aaKnown RBP24.68■■□□□ 1.54
PPP1R3E-206ENST00000560913 KRT27Q7Z3Y8 459 aa24.68■■□□□ 1.54
PPP1R3E-206ENST00000560913 USP19O94966 1318 aa24.67■■□□□ 1.54
PPP1R3E-206ENST00000560913 LMO7Q8WWI1 1683 aa24.66■■□□□ 1.54
PPP1R3E-206ENST00000560913 ZC3H6P61129 1189 aaKnown RBP24.66■■□□□ 1.54
PPP1R3E-206ENST00000560913 CHRNA2Q15822 529 aa24.66■■□□□ 1.54
PPP1R3E-206ENST00000560913 ABTB2Q8N961 1025 aa24.66■■□□□ 1.54
PPP1R3E-206ENST00000560913 BRD4O60885 1362 aaPredicted RBP24.66■■□□□ 1.54
PPP1R3E-206ENST00000560913 ROCK2O75116 1388 aaKnown RBP24.66■■□□□ 1.54
PPP1R3E-206ENST00000560913 USP6P35125 1406 aa24.64■■□□□ 1.54
PPP1R3E-206ENST00000560913 CABP1Q9NZU7 370 aa24.64■■□□□ 1.54
PPP1R3E-206ENST00000560913 CPDO75976 1380 aa24.64■■□□□ 1.53
PPP1R3E-206ENST00000560913 CAMTA1Q9Y6Y1 1673 aa24.63■■□□□ 1.53
PPP1R3E-206ENST00000560913 SSH2Q76I76 1423 aa24.63■■□□□ 1.53
PPP1R3E-206ENST00000560913 SPATA31A1Q5TZJ5 1347 aa24.62■■□□□ 1.53
PPP1R3E-206ENST00000560913 EVC2Q86UK5 1308 aa24.62■■□□□ 1.53
PPP1R3E-206ENST00000560913 SRCAPQ6ZRS2 3230 aa24.62■■□□□ 1.53
PPP1R3E-206ENST00000560913 DCAF8L1A6NGE4 600 aa24.61■■□□□ 1.53
PPP1R3E-206ENST00000560913 AKAP12Q02952 1782 aa24.61■■□□□ 1.53
PPP1R3E-206ENST00000560913 PIK3C2AO00443 1686 aa24.6■■□□□ 1.53
PPP1R3E-206ENST00000560913 DEFB132Q7Z7B7 95 aa24.6■■□□□ 1.53
PPP1R3E-206ENST00000560913 NLRP13Q86W25 1043 aa24.6■■□□□ 1.53
PPP1R3E-206ENST00000560913 A0A0G2JS52 829 aa24.59■■□□□ 1.53
PPP1R3E-206ENST00000560913 MYT1Q01538 1121 aa24.59■■□□□ 1.53
PPP1R3E-206ENST00000560913 SLIT3O75094 1523 aa24.59■■□□□ 1.53
PPP1R3E-206ENST00000560913 GCP02774 474 aa24.58■■□□□ 1.53
PPP1R3E-206ENST00000560913 ZRANB1Q9UGI0 708 aa24.58■■□□□ 1.53
PPP1R3E-206ENST00000560913 STRN4Q9NRL3 753 aa24.57■■□□□ 1.52
PPP1R3E-206ENST00000560913 SBNO2Q9Y2G9 1366 aa24.55■■□□□ 1.52
PPP1R3E-206ENST00000560913 RGPD1P0DJD0 1748 aa24.55■■□□□ 1.52
PPP1R3E-206ENST00000560913 COL18A1P39060 1754 aa24.54■■□□□ 1.52
PPP1R3E-206ENST00000560913 TNS1Q9HBL0 1735 aaKnown RBP24.53■■□□□ 1.52
PPP1R3E-206ENST00000560913 SF3B2Q13435 895 aaKnown RBP24.53■■□□□ 1.52
PPP1R3E-206ENST00000560913 FAM182BQ5T319 152 aa24.53■■□□□ 1.52
PPP1R3E-206ENST00000560913 CPSF1Q10570 1443 aaKnown RBP24.52■■□□□ 1.52
PPP1R3E-206ENST00000560913 COL5A2P05997 1499 aaPredicted RBP24.52■■□□□ 1.52
PPP1R3E-206ENST00000560913 NLRP6P59044 892 aa24.52■■□□□ 1.52
PPP1R3E-206ENST00000560913 LARP1Q6PKG0 1096 aaKnown RBP24.52■■□□□ 1.52
PPP1R3E-206ENST00000560913 BARGINQ6ZT62 677 aa24.52■■□□□ 1.52
PPP1R3E-206ENST00000560913 EVA1CP58658 441 aa24.51■■□□□ 1.51
PPP1R3E-206ENST00000560913 MON2Q7Z3U7 1717 aa24.51■■□□□ 1.51
PPP1R3E-206ENST00000560913 ZNF692Q9BU19 519 aaPredicted RBP24.5■■□□□ 1.51
PPP1R3E-206ENST00000560913 CARD11Q9BXL7 1154 aa24.49■■□□□ 1.51
PPP1R3E-206ENST00000560913 TTC21BQ7Z4L5 1316 aa24.49■■□□□ 1.51
PPP1R3E-206ENST00000560913 AATKQ6ZMQ8 1374 aa24.48■■□□□ 1.51
PPP1R3E-206ENST00000560913 TONSLQ96HA7 1378 aa24.48■■□□□ 1.51
PPP1R3E-206ENST00000560913 USP35Q9P2H5 1018 aa24.48■■□□□ 1.51
PPP1R3E-206ENST00000560913 PARP4Q9UKK3 1724 aaKnown RBP24.47■■□□□ 1.51
PPP1R3E-206ENST00000560913 DISP2A7MBM2 1401 aa24.46■■□□□ 1.51
PPP1R3E-206ENST00000560913 BAG6P46379 1132 aa24.46■■□□□ 1.51
PPP1R3E-206ENST00000560913 TCP11L2Q8N4U5 519 aa24.46■■□□□ 1.51
PPP1R3E-206ENST00000560913 CD163L1Q9NR16 1453 aa24.45■■□□□ 1.51
PPP1R3E-206ENST00000560913 TRIM26Q12899 539 aaPredicted RBP24.45■■□□□ 1.5
PPP1R3E-206ENST00000560913 RGPD5Q99666 1765 aa24.44■■□□□ 1.5
PPP1R3E-206ENST00000560913 TTC21AQ8NDW8 1320 aa24.44■■□□□ 1.5
PPP1R3E-206ENST00000560913 THRAP3Q9Y2W1 955 aaKnown RBP24.44■■□□□ 1.5
PPP1R3E-206ENST00000560913 CRB1P82279 1406 aa24.44■■□□□ 1.5
PPP1R3E-206ENST00000560913 USP54Q70EL1 1684 aa24.43■■□□□ 1.5
PPP1R3E-206ENST00000560913 KTN1Q86UP2 1357 aaKnown RBP24.43■■□□□ 1.5
PPP1R3E-206ENST00000560913 NFAT5O94916 1531 aa24.43■■□□□ 1.5
PPP1R3E-206ENST00000560913 FAM196AQ6ZSG2 479 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms