RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 KRTAP4-6Q9BYQ5 205 aa10.56□□□□□ -0.72
PSMA4-221ENST00000560842 SCARF1Q14162 830 aa10.55□□□□□ -0.72
PSMA4-221ENST00000560842 ZMYND10O75800 440 aa10.54□□□□□ -0.72
PSMA4-221ENST00000560842 TIMP2P16035 220 aa10.54□□□□□ -0.72
PSMA4-221ENST00000560842 DESI1Q6ICB0 168 aa10.54□□□□□ -0.72
PSMA4-221ENST00000560842 SPIRE2Q8WWL2 714 aa10.54□□□□□ -0.72
PSMA4-221ENST00000560842 PURBQ96QR8 312 aaKnown RBP10.54□□□□□ -0.72
PSMA4-221ENST00000560842 VSIG8P0DPA2 414 aa10.53□□□□□ -0.72
PSMA4-221ENST00000560842 NDUFV2P19404 249 aa10.53□□□□□ -0.72
PSMA4-221ENST00000560842 PRR7Q8TB68 274 aa10.53□□□□□ -0.72
PSMA4-221ENST00000560842 KLF16Q9BXK1 252 aaPredicted RBP10.53□□□□□ -0.72
PSMA4-221ENST00000560842 ADH1CP00326 375 aa10.52□□□□□ -0.73
PSMA4-221ENST00000560842 SSTR3P32745 418 aaPredicted RBP10.52□□□□□ -0.73
PSMA4-221ENST00000560842 WDR4P57081 412 aaKnown RBP10.52□□□□□ -0.73
PSMA4-221ENST00000560842 MOXD2PA6NHM9 499 aa10.5□□□□□ -0.73
PSMA4-221ENST00000560842 SPDYE5A6NIY4 337 aa10.5□□□□□ -0.73
PSMA4-221ENST00000560842 SOBPA7XYQ1 873 aa10.5□□□□□ -0.73
PSMA4-221ENST00000560842 BARGINQ6ZT62 677 aa10.5□□□□□ -0.73
PSMA4-221ENST00000560842 MTMR2Q13614 643 aa10.49□□□□□ -0.73
PSMA4-221ENST00000560842 FAM174AQ8TBP5 190 aa10.48□□□□□ -0.73
PSMA4-221ENST00000560842 CDK15Q96Q40 435 aa10.48□□□□□ -0.73
PSMA4-221ENST00000560842 TPRNQ4KMQ1 711 aa10.46□□□□□ -0.73
PSMA4-221ENST00000560842 LYPD8Q6UX82 237 aa10.45□□□□□ -0.74
PSMA4-221ENST00000560842 KCNMA1Q12791 1236 aa10.44□□□□□ -0.74
PSMA4-221ENST00000560842 ZIC2O95409 532 aaPredicted RBP10.43□□□□□ -0.74
PSMA4-221ENST00000560842 CTHP32929 405 aa10.43□□□□□ -0.74
PSMA4-221ENST00000560842 GJA5P36382 358 aa10.43□□□□□ -0.74
PSMA4-221ENST00000560842 MAN1A2O60476 641 aa10.42□□□□□ -0.74
PSMA4-221ENST00000560842 PPFIA3O75145 1194 aa10.42□□□□□ -0.74
PSMA4-221ENST00000560842 NR5A1Q13285 461 aa10.42□□□□□ -0.74
PSMA4-221ENST00000560842 FOXJ1Q92949 421 aa10.42□□□□□ -0.74
PSMA4-221ENST00000560842 ITPKCQ96DU7 683 aa10.42□□□□□ -0.74
PSMA4-221ENST00000560842 ZFAND3Q9H8U3 227 aa10.42□□□□□ -0.74
PSMA4-221ENST00000560842 SUZ12Q15022 739 aaKnown RBP10.41□□□□□ -0.74
PSMA4-221ENST00000560842 GSK3AP49840 483 aa10.4□□□□□ -0.74
PSMA4-221ENST00000560842 ARID5BQ14865 1188 aa10.4□□□□□ -0.74
PSMA4-221ENST00000560842 C6orf118Q5T5N4 469 aa10.4□□□□□ -0.74
PSMA4-221ENST00000560842 F12P00748 615 aaPredicted RBP10.39□□□□□ -0.75
PSMA4-221ENST00000560842 NR3C2P08235 984 aa10.39□□□□□ -0.75
PSMA4-221ENST00000560842 GRM5P41594 1212 aa10.39□□□□□ -0.75
PSMA4-221ENST00000560842 PRKCSHP14314 528 aaPredicted RBP10.38□□□□□ -0.75
PSMA4-221ENST00000560842 CFAP99D6REC4 459 aa10.37□□□□□ -0.75
PSMA4-221ENST00000560842 TTLL12Q14166 644 aaPredicted RBP10.37□□□□□ -0.75
PSMA4-221ENST00000560842 AMHR2Q16671 573 aa10.37□□□□□ -0.75
PSMA4-221ENST00000560842 C4orf48Q5BLP8 95 aa10.37□□□□□ -0.75
PSMA4-221ENST00000560842 RSBN1LQ6PCB5 846 aaPredicted RBP10.37□□□□□ -0.75
PSMA4-221ENST00000560842 BEGAINQ9BUH8 593 aa10.37□□□□□ -0.75
PSMA4-221ENST00000560842 MAP10Q9P2G4 905 aa10.37□□□□□ -0.75
PSMA4-221ENST00000560842 SPTLC1O15269 473 aa10.36□□□□□ -0.75
PSMA4-221ENST00000560842 UPP2O95045 317 aa10.36□□□□□ -0.75
PSMA4-221ENST00000560842 BMP2P12643 396 aa10.36□□□□□ -0.75
PSMA4-221ENST00000560842 DIXDC1Q155Q3 683 aa10.36□□□□□ -0.75
PSMA4-221ENST00000560842 GIGYF2Q6Y7W6 1299 aaKnown RBP10.36□□□□□ -0.75
PSMA4-221ENST00000560842 TBC1D2Q9BYX2 928 aa10.36□□□□□ -0.75
PSMA4-221ENST00000560842 PCDHB15Q9Y5E8 787 aa10.36□□□□□ -0.75
PSMA4-221ENST00000560842 LINC00528Q8N1L1 170 aa10.35□□□□□ -0.75
PSMA4-221ENST00000560842 KCTD17Q8N5Z5 321 aa10.35□□□□□ -0.75
PSMA4-221ENST00000560842 SLC24A3Q9HC58 644 aa10.35□□□□□ -0.75
PSMA4-221ENST00000560842 SOS2Q07890 1332 aaPredicted RBP10.34□□□□□ -0.75
PSMA4-221ENST00000560842 HRCP23327 699 aa10.34□□□□□ -0.75
PSMA4-221ENST00000560842 AGERQ15109 404 aa10.34□□□□□ -0.75
PSMA4-221ENST00000560842 BPHLQ86WA6 291 aaPredicted RBP10.34□□□□□ -0.75
PSMA4-221ENST00000560842 MEIOBQ8N635 442 aa10.34□□□□□ -0.75
PSMA4-221ENST00000560842 AK7Q96M32 723 aa10.34□□□□□ -0.75
PSMA4-221ENST00000560842 ZBTB3Q9H5J0 574 aa10.33□□□□□ -0.76
PSMA4-221ENST00000560842 DNMT3LQ9UJW3 386 aa10.33□□□□□ -0.76
PSMA4-221ENST00000560842 PRPF38BQ5VTL8 546 aaKnown RBP10.31□□□□□ -0.76
PSMA4-221ENST00000560842 TMEM151AQ8N4L1 468 aa10.31□□□□□ -0.76
PSMA4-221ENST00000560842 TRIM66O15016 1216 aa10.3□□□□□ -0.76
PSMA4-221ENST00000560842 KRT76Q01546 638 aa10.3□□□□□ -0.76
PSMA4-221ENST00000560842 GPR161Q8N6U8 529 aaKnown RBP10.3□□□□□ -0.76
PSMA4-221ENST00000560842 RASSF7Q02833 373 aa10.29□□□□□ -0.76
PSMA4-221ENST00000560842 TSEN34Q9BSV6 310 aaKnown RBP10.29□□□□□ -0.76
PSMA4-221ENST00000560842 C1QTNF2Q9BXJ5 285 aa10.29□□□□□ -0.76
PSMA4-221ENST00000560842 PER1O15534 1290 aaPredicted RBP10.28□□□□□ -0.76
PSMA4-221ENST00000560842 GDF11O95390 407 aa10.28□□□□□ -0.76
PSMA4-221ENST00000560842 SH3RF1Q7Z6J0 888 aa10.28□□□□□ -0.76
PSMA4-221ENST00000560842 ADAMTS8Q9UP79 889 aa10.28□□□□□ -0.76
PSMA4-221ENST00000560842 MAP4K5Q9Y4K4 846 aa10.28□□□□□ -0.76
PSMA4-221ENST00000560842 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.27□□□□□ -0.77
PSMA4-221ENST00000560842 RIC3Q7Z5B4 369 aa10.27□□□□□ -0.77
PSMA4-221ENST00000560842 ARMC2Q8NEN0 867 aa10.27□□□□□ -0.77
PSMA4-221ENST00000560842 CNTNAP3BQ96NU0 1288 aa10.27□□□□□ -0.77
PSMA4-221ENST00000560842 CNTNAP3Q9BZ76 1288 aa10.27□□□□□ -0.77
PSMA4-221ENST00000560842 FSHRP23945 695 aa10.26□□□□□ -0.77
PSMA4-221ENST00000560842 CABLES1Q8TDN4 633 aa10.26□□□□□ -0.77
PSMA4-221ENST00000560842 EMILIN1Q9Y6C2 1016 aa10.26□□□□□ -0.77
PSMA4-221ENST00000560842 RNF225M0QZC1 329 aaPredicted RBP10.25□□□□□ -0.77
PSMA4-221ENST00000560842 VASH1Q7L8A9 365 aaPredicted RBP10.25□□□□□ -0.77
PSMA4-221ENST00000560842 TRMT44Q8IYL2 757 aaKnown RBP10.25□□□□□ -0.77
PSMA4-221ENST00000560842 NANOS1Q8WY41 292 aaKnown RBP10.25□□□□□ -0.77
PSMA4-221ENST00000560842 TTLL8A6PVC2 850 aa10.24□□□□□ -0.77
PSMA4-221ENST00000560842 PTSQ03393 145 aa10.24□□□□□ -0.77
PSMA4-221ENST00000560842 SH3BP5LQ7L8J4 393 aa10.23□□□□□ -0.77
PSMA4-221ENST00000560842 PARP9Q8IXQ6 854 aa10.23□□□□□ -0.77
PSMA4-221ENST00000560842 CCDC116Q8IYX3 515 aa10.23□□□□□ -0.77
PSMA4-221ENST00000560842 COL25A1Q9BXS0 654 aaPredicted RBP10.23□□□□□ -0.77
PSMA4-221ENST00000560842 PDE4DQ08499 809 aa10.22□□□□□ -0.77
PSMA4-221ENST00000560842 CSPP1Q1MSJ5 1256 aa10.21□□□□□ -0.77
PSMA4-221ENST00000560842 NBPF14Q5TI25 921 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms