RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 CHADLQ6NUI6 762 aa9.88□□□□□ -0.83
CTDSPL2-210ENST00000560834 WASLO00401 505 aaPredicted RBP9.87□□□□□ -0.83
CTDSPL2-210ENST00000560834 C19orf44Q9H6X5 657 aa9.87□□□□□ -0.83
CTDSPL2-210ENST00000560834 EVC2Q86UK5 1308 aa9.86□□□□□ -0.83
CTDSPL2-210ENST00000560834 CD163L1Q9NR16 1453 aa9.86□□□□□ -0.83
CTDSPL2-210ENST00000560834 SPDYE2BA6NHP3 402 aa9.86□□□□□ -0.83
CTDSPL2-210ENST00000560834 SPDYE6P0CI01 402 aa9.86□□□□□ -0.83
CTDSPL2-210ENST00000560834 SPDYE2Q495Y8 402 aa9.86□□□□□ -0.83
CTDSPL2-210ENST00000560834 C14orf37Q86TY3 774 aa9.86□□□□□ -0.83
CTDSPL2-210ENST00000560834 CERKQ8TCT0 537 aa9.86□□□□□ -0.83
CTDSPL2-210ENST00000560834 TRPM3Q9HCF6 1732 aaPredicted RBP9.86□□□□□ -0.83
CTDSPL2-210ENST00000560834 ATAD2Q6PL18 1390 aa9.86□□□□□ -0.83
CTDSPL2-210ENST00000560834 AHDC1Q5TGY3 1603 aaPredicted RBP9.85□□□□□ -0.83
CTDSPL2-210ENST00000560834 C11orf95C9JLR9 678 aaPredicted RBP9.85□□□□□ -0.83
CTDSPL2-210ENST00000560834 POTEB2H3BUK9 544 aa9.85□□□□□ -0.83
CTDSPL2-210ENST00000560834 TMF1P82094 1093 aa9.85□□□□□ -0.83
CTDSPL2-210ENST00000560834 IFNLR1Q8IU57 520 aaPredicted RBP9.85□□□□□ -0.83
CTDSPL2-210ENST00000560834 CDK19Q9BWU1 502 aa9.85□□□□□ -0.83
CTDSPL2-210ENST00000560834 CCDC7Q96M83 1385 aa9.85□□□□□ -0.83
CTDSPL2-210ENST00000560834 KIF7Q2M1P5 1343 aa9.84□□□□□ -0.83
CTDSPL2-210ENST00000560834 PPIP5K1Q6PFW1 1433 aa9.84□□□□□ -0.83
CTDSPL2-210ENST00000560834 CADPS2Q86UW7 1296 aa9.84□□□□□ -0.83
CTDSPL2-210ENST00000560834 CABP2Q9NPB3 220 aa9.84□□□□□ -0.83
CTDSPL2-210ENST00000560834 WASHC2AQ641Q2 1341 aa9.83□□□□□ -0.84
CTDSPL2-210ENST00000560834 COL16A1Q07092 1604 aaPredicted RBP9.83□□□□□ -0.84
CTDSPL2-210ENST00000560834 ATF3P18847 181 aa9.83□□□□□ -0.84
CTDSPL2-210ENST00000560834 SRPK2P78362 688 aaKnown RBP9.83□□□□□ -0.84
CTDSPL2-210ENST00000560834 NINLQ9Y2I6 1382 aa9.83□□□□□ -0.84
CTDSPL2-210ENST00000560834 KIF20BQ96Q89 1820 aa9.82□□□□□ -0.84
CTDSPL2-210ENST00000560834 NUTM2FA1L443 756 aa9.82□□□□□ -0.84
CTDSPL2-210ENST00000560834 NUDT16Q96DE0 195 aaKnown RBP9.82□□□□□ -0.84
CTDSPL2-210ENST00000560834 PUS7Q96PZ0 661 aaKnown RBP9.82□□□□□ -0.84
CTDSPL2-210ENST00000560834 POLR3AO14802 1390 aaPredicted RBP9.82□□□□□ -0.84
CTDSPL2-210ENST00000560834 PXDNQ92626 1479 aa9.82□□□□□ -0.84
CTDSPL2-210ENST00000560834 USP54Q70EL1 1684 aa9.82□□□□□ -0.84
CTDSPL2-210ENST00000560834 ALS2Q96Q42 1657 aa9.82□□□□□ -0.84
CTDSPL2-210ENST00000560834 PHLPP1O60346 1717 aa9.82□□□□□ -0.84
CTDSPL2-210ENST00000560834 MARF1Q9Y4F3 1742 aaKnown RBP9.82□□□□□ -0.84
CTDSPL2-210ENST00000560834 PIK3C2AO00443 1686 aa9.81□□□□□ -0.84
CTDSPL2-210ENST00000560834 CRYBG1Q9Y4K1 1723 aa9.81□□□□□ -0.84
CTDSPL2-210ENST00000560834 CPSF1Q10570 1443 aaKnown RBP9.81□□□□□ -0.84
CTDSPL2-210ENST00000560834 A0A1W2PP64 1363 aa9.8□□□□□ -0.84
CTDSPL2-210ENST00000560834 ABCA3Q99758 1704 aa9.8□□□□□ -0.84
CTDSPL2-210ENST00000560834 ANKRD26Q9UPS8 1709 aa9.8□□□□□ -0.84
CTDSPL2-210ENST00000560834 CDCA8Q53HL2 280 aa9.8□□□□□ -0.84
CTDSPL2-210ENST00000560834 BRINP3Q76B58 766 aa9.8□□□□□ -0.84
CTDSPL2-210ENST00000560834 ORAI2Q96SN7 254 aa9.8□□□□□ -0.84
CTDSPL2-210ENST00000560834 ANKRD36BQ8N2N9 1353 aa9.79□□□□□ -0.84
CTDSPL2-210ENST00000560834 SLAIN2Q9P270 581 aa9.79□□□□□ -0.84
CTDSPL2-210ENST00000560834 CCDC61Q9Y6R9 512 aa9.79□□□□□ -0.84
CTDSPL2-210ENST00000560834 USP6P35125 1406 aa9.79□□□□□ -0.84
CTDSPL2-210ENST00000560834 SSH2Q76I76 1423 aa9.79□□□□□ -0.84
CTDSPL2-210ENST00000560834 PLEKHG3A1L390 1219 aa9.78□□□□□ -0.84
CTDSPL2-210ENST00000560834 UBAP1LF5GYI3 381 aa9.78□□□□□ -0.84
CTDSPL2-210ENST00000560834 MED1Q15648 1581 aaPredicted RBP9.78□□□□□ -0.84
CTDSPL2-210ENST00000560834 COL22A1Q8NFW1 1626 aaPredicted RBP9.78□□□□□ -0.84
CTDSPL2-210ENST00000560834 PHRF1Q9P1Y6 1649 aaKnown RBP9.78□□□□□ -0.84
CTDSPL2-210ENST00000560834 SHPRHQ149N8 1683 aa9.77□□□□□ -0.84
CTDSPL2-210ENST00000560834 ZNF316A6NFI3 1004 aaPredicted RBP9.77□□□□□ -0.85
CTDSPL2-210ENST00000560834 TOM1O60784 492 aa9.77□□□□□ -0.85
CTDSPL2-210ENST00000560834 ESCO1Q5FWF5 840 aa9.77□□□□□ -0.85
CTDSPL2-210ENST00000560834 PMFBP1Q8TBY8 1022 aa9.77□□□□□ -0.85
CTDSPL2-210ENST00000560834 CABP1Q9NZU7 370 aa9.77□□□□□ -0.85
CTDSPL2-210ENST00000560834 PHF8Q9UPP1 1060 aa9.77□□□□□ -0.85
CTDSPL2-210ENST00000560834 ACEP12821 1306 aa9.77□□□□□ -0.85
CTDSPL2-210ENST00000560834 EDC4Q6P2E9 1401 aaKnown RBP9.76□□□□□ -0.85
CTDSPL2-210ENST00000560834 NSD3Q9BZ95 1437 aa9.76□□□□□ -0.85
CTDSPL2-210ENST00000560834 POLR3GLQ9BT43 218 aa9.76□□□□□ -0.85
CTDSPL2-210ENST00000560834 SLC12A5Q9H2X9 1139 aa9.76□□□□□ -0.85
CTDSPL2-210ENST00000560834 TNS3Q68CZ2 1445 aa9.75□□□□□ -0.85
CTDSPL2-210ENST00000560834 TMC1Q8TDI8 760 aa9.75□□□□□ -0.85
CTDSPL2-210ENST00000560834 DDX17Q92841 729 aaKnown RBP9.75□□□□□ -0.85
CTDSPL2-210ENST00000560834 FAM163AQ96GL9 167 aaPredicted RBP9.75□□□□□ -0.85
CTDSPL2-210ENST00000560834 NPHP3Q7Z494 1330 aa9.75□□□□□ -0.85
CTDSPL2-210ENST00000560834 KTN1Q86UP2 1357 aaKnown RBP9.75□□□□□ -0.85
CTDSPL2-210ENST00000560834 PIP4K2BP78356 416 aa9.74□□□□□ -0.85
CTDSPL2-210ENST00000560834 SOS2Q07890 1332 aaPredicted RBP9.74□□□□□ -0.85
CTDSPL2-210ENST00000560834 SBNO1A3KN83 1393 aa9.74□□□□□ -0.85
CTDSPL2-210ENST00000560834 OVOS2A0A0J9YW53 1432 aa9.73□□□□□ -0.85
CTDSPL2-210ENST00000560834 OVOS2Q6IE36 1432 aa9.73□□□□□ -0.85
CTDSPL2-210ENST00000560834 SLIT3O75094 1523 aa9.73□□□□□ -0.85
CTDSPL2-210ENST00000560834 FOXO3O43524 673 aa9.73□□□□□ -0.85
CTDSPL2-210ENST00000560834 ZNF692Q9BU19 519 aaPredicted RBP9.73□□□□□ -0.85
CTDSPL2-210ENST00000560834 BRD4O60885 1362 aaPredicted RBP9.73□□□□□ -0.85
CTDSPL2-210ENST00000560834 XPCQ01831 940 aaPredicted RBP9.72□□□□□ -0.85
CTDSPL2-210ENST00000560834 HDGFL2Q7Z4V5 671 aaPredicted RBP9.72□□□□□ -0.85
CTDSPL2-210ENST00000560834 NGDNQ8NEJ9 315 aaKnown RBP9.72□□□□□ -0.85
CTDSPL2-210ENST00000560834 CARD14Q9BXL6 1004 aa9.72□□□□□ -0.85
CTDSPL2-210ENST00000560834 TERF2IPQ9NYB0 399 aa9.72□□□□□ -0.85
CTDSPL2-210ENST00000560834 SSUH2Q9Y2M2 353 aa9.72□□□□□ -0.85
CTDSPL2-210ENST00000560834 LCE2DQ5TA82 110 aaPredicted RBP9.71□□□□□ -0.86
CTDSPL2-210ENST00000560834 PANK3Q9H999 370 aa9.71□□□□□ -0.86
CTDSPL2-210ENST00000560834 NFAT5O94916 1531 aa9.71□□□□□ -0.86
CTDSPL2-210ENST00000560834 PRR29P0C7W0 189 aa9.7□□□□□ -0.86
CTDSPL2-210ENST00000560834 KRT28Q7Z3Y7 464 aa9.7□□□□□ -0.86
CTDSPL2-210ENST00000560834 SPATA31A3Q5VYP0 1347 aa9.7□□□□□ -0.86
CTDSPL2-210ENST00000560834 TTC21BQ7Z4L5 1316 aa9.7□□□□□ -0.86
CTDSPL2-210ENST00000560834 TTC21AQ8NDW8 1320 aa9.7□□□□□ -0.86
CTDSPL2-210ENST00000560834 PNPLA6Q8IY17 1366 aa9.7□□□□□ -0.86
CTDSPL2-210ENST00000560834 ARHGEF10O15013 1369 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms