RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 PTPRUQ92729 1446 aa25■■□□□ 1.59
HMBOX1-215ENST00000560599 U2AF1L5P0DN76 240 aaPredicted RBP25■■□□□ 1.59
HMBOX1-215ENST00000560599 U2AF1Q01081 240 aaKnown RBP eCLIP25■■□□□ 1.59
HMBOX1-215ENST00000560599 TBX22Q9Y458 520 aa25■■□□□ 1.59
HMBOX1-215ENST00000560599 NRKQ7Z2Y5 1582 aa25■■□□□ 1.59
HMBOX1-215ENST00000560599 WWC1Q8IX03 1113 aa24.99■■□□□ 1.59
HMBOX1-215ENST00000560599 EXOC6Q8TAG9 804 aa24.99■■□□□ 1.59
HMBOX1-215ENST00000560599 PHF23Q9BUL5 403 aaPredicted RBP24.99■■□□□ 1.59
HMBOX1-215ENST00000560599 TCP11L2Q8N4U5 519 aa24.98■■□□□ 1.59
HMBOX1-215ENST00000560599 WDR63Q8IWG1 891 aa24.97■■□□□ 1.59
HMBOX1-215ENST00000560599 CDK12Q9NYV4 1490 aaPredicted RBP24.97■■□□□ 1.59
HMBOX1-215ENST00000560599 PNNQ9H307 717 aaKnown RBP24.96■■□□□ 1.59
HMBOX1-215ENST00000560599 AATKQ6ZMQ8 1374 aa24.96■■□□□ 1.59
HMBOX1-215ENST00000560599 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.95■■□□□ 1.593e-6■□□□□ 9.3
HMBOX1-215ENST00000560599 ZNF692Q9BU19 519 aaPredicted RBP24.95■■□□□ 1.59
HMBOX1-215ENST00000560599 PIK3R4Q99570 1358 aa24.95■■□□□ 1.58
HMBOX1-215ENST00000560599 ADAMTSL3P82987 1691 aa24.95■■□□□ 1.58
HMBOX1-215ENST00000560599 DIAPH1O60610 1272 aaKnown RBP24.94■■□□□ 1.58
HMBOX1-215ENST00000560599 SPINK5Q9NQ38 1064 aaPredicted RBP24.93■■□□□ 1.58
HMBOX1-215ENST00000560599 PRR36Q9H6K5 1346 aa24.93■■□□□ 1.58
HMBOX1-215ENST00000560599 U2SURPO15042 1029 aaKnown RBP24.92■■□□□ 1.58
HMBOX1-215ENST00000560599 MAPK8IP3Q9UPT6 1336 aa24.92■■□□□ 1.58
HMBOX1-215ENST00000560599 SLC26A8Q96RN1 970 aa24.91■■□□□ 1.58
HMBOX1-215ENST00000560599 CRBNQ96SW2 442 aa24.91■■□□□ 1.58
HMBOX1-215ENST00000560599 PLIN1O60240 522 aa24.9■■□□□ 1.58
HMBOX1-215ENST00000560599 PLPPR3Q6T4P5 718 aa24.9■■□□□ 1.58
HMBOX1-215ENST00000560599 LRRC7Q96NW7 1537 aa24.9■■□□□ 1.58
HMBOX1-215ENST00000560599 RRP7AQ9Y3A4 280 aaKnown RBP24.89■■□□□ 1.58
HMBOX1-215ENST00000560599 RBM19Q9Y4C8 960 aaKnown RBP24.89■■□□□ 1.58
HMBOX1-215ENST00000560599 COG3Q96JB2 828 aa24.88■■□□□ 1.57
HMBOX1-215ENST00000560599 AMOTL2Q9Y2J4 779 aa24.88■■□□□ 1.57
HMBOX1-215ENST00000560599 DMRT2Q9Y5R5 561 aa24.88■■□□□ 1.57
HMBOX1-215ENST00000560599 PLEKHG3A1L390 1219 aa24.87■■□□□ 1.57
HMBOX1-215ENST00000560599 PLEKHF1Q96S99 279 aa24.87■■□□□ 1.57
HMBOX1-215ENST00000560599 MYH16Q9H6N6 1097 aa24.87■■□□□ 1.57
HMBOX1-215ENST00000560599 NEUROD2Q15784 382 aa24.86■■□□□ 1.57
HMBOX1-215ENST00000560599 NME9Q86XW9 330 aa24.86■■□□□ 1.57
HMBOX1-215ENST00000560599 POLKQ9UBT6 870 aa24.86■■□□□ 1.57
HMBOX1-215ENST00000560599 NALCNQ8IZF0 1738 aa24.86■■□□□ 1.57
HMBOX1-215ENST00000560599 MAP2P11137 1827 aaKnown RBP24.85■■□□□ 1.57
HMBOX1-215ENST00000560599 USP6P35125 1406 aa24.85■■□□□ 1.57
HMBOX1-215ENST00000560599 ANKARQ7Z5J8 1434 aa24.85■■□□□ 1.57
HMBOX1-215ENST00000560599 IL16Q14005 1332 aa24.83■■□□□ 1.57
HMBOX1-215ENST00000560599 OVOS2A0A0J9YW53 1432 aa24.83■■□□□ 1.56
HMBOX1-215ENST00000560599 OVOS2Q6IE36 1432 aa24.83■■□□□ 1.56
HMBOX1-215ENST00000560599 TMPOP42166 694 aaKnown RBP24.82■■□□□ 1.56
HMBOX1-215ENST00000560599 TTC21BQ7Z4L5 1316 aa24.81■■□□□ 1.56
HMBOX1-215ENST00000560599 NCKAP5LQ9HCH0 1330 aa24.81■■□□□ 1.56
HMBOX1-215ENST00000560599 FCHSD2O94868 740 aa24.81■■□□□ 1.56
HMBOX1-215ENST00000560599 FMN2Q9NZ56 1722 aa24.81■■□□□ 1.56
HMBOX1-215ENST00000560599 ACEP12821 1306 aa24.8■■□□□ 1.56
HMBOX1-215ENST00000560599 NEFMP07197 916 aa24.8■■□□□ 1.56
HMBOX1-215ENST00000560599 C20orf194Q5TEA3 1177 aa24.8■■□□□ 1.56
HMBOX1-215ENST00000560599 CT47B1P0C2W7 299 aaPredicted RBP24.79■■□□□ 1.56
HMBOX1-215ENST00000560599 TTC21AQ8NDW8 1320 aa24.78■■□□□ 1.56
HMBOX1-215ENST00000560599 SSH2Q76I76 1423 aa24.78■■□□□ 1.56
HMBOX1-215ENST00000560599 PDE3AQ14432 1141 aa24.77■■□□□ 1.56
HMBOX1-215ENST00000560599 RSPH6AQ9H0K4 717 aa24.77■■□□□ 1.56
HMBOX1-215ENST00000560599 PPM1GO15355 546 aaPredicted RBP24.76■■□□□ 1.55
HMBOX1-215ENST00000560599 EMILIN1Q9Y6C2 1016 aa24.76■■□□□ 1.55
HMBOX1-215ENST00000560599 ANKLE2Q86XL3 938 aa24.75■■□□□ 1.55
HMBOX1-215ENST00000560599 ZRANB1Q9UGI0 708 aa24.75■■□□□ 1.55
HMBOX1-215ENST00000560599 CHD2O14647 1828 aaKnown RBP24.75■■□□□ 1.55
HMBOX1-215ENST00000560599 USP31Q70CQ4 1352 aa24.74■■□□□ 1.55
HMBOX1-215ENST00000560599 BCAR3O75815 825 aa24.74■■□□□ 1.55
HMBOX1-215ENST00000560599 CANXP27824 592 aaKnown RBP24.74■■□□□ 1.55
HMBOX1-215ENST00000560599 IL13P35225 146 aa24.74■■□□□ 1.55
HMBOX1-215ENST00000560599 TRIM35Q9UPQ4 493 aa24.73■■□□□ 1.55
HMBOX1-215ENST00000560599 USP54Q70EL1 1684 aa24.72■■□□□ 1.55
HMBOX1-215ENST00000560599 TCERG1O14776 1098 aaKnown RBP24.72■■□□□ 1.55
HMBOX1-215ENST00000560599 RARSP54136 660 aaKnown RBP24.72■■□□□ 1.55
HMBOX1-215ENST00000560599 FANCIQ9NVI1 1328 aa24.72■■□□□ 1.55
HMBOX1-215ENST00000560599 PRKAR2BP31323 418 aa24.71■■□□□ 1.55
HMBOX1-215ENST00000560599 RIPK4P57078 832 aa24.71■■□□□ 1.55
HMBOX1-215ENST00000560599 KCNA6P17658 529 aa24.69■■□□□ 1.54
HMBOX1-215ENST00000560599 CALD1Q05682 793 aaKnown RBP24.69■■□□□ 1.54
HMBOX1-215ENST00000560599 NFE2L2Q16236 605 aa24.69■■□□□ 1.54
HMBOX1-215ENST00000560599 CENPQQ7L2Z9 268 aaPredicted RBP24.69■■□□□ 1.54
HMBOX1-215ENST00000560599 AAMPQ13685 434 aa24.68■■□□□ 1.54
HMBOX1-215ENST00000560599 SETD1BQ9UPS6 1966 aaKnown RBP24.68■■□□□ 1.54
HMBOX1-215ENST00000560599 KDM2BQ8NHM5 1336 aa24.68■■□□□ 1.54
HMBOX1-215ENST00000560599 PIK3C2AO00443 1686 aa24.67■■□□□ 1.54
HMBOX1-215ENST00000560599 NUTM2FA1L443 756 aa24.67■■□□□ 1.54
HMBOX1-215ENST00000560599 MS4A1P11836 297 aa24.67■■□□□ 1.54
HMBOX1-215ENST00000560599 FBLN1P23142 703 aa24.67■■□□□ 1.54
HMBOX1-215ENST00000560599 RGPD8O14715 1765 aaPredicted RBP24.67■■□□□ 1.54
HMBOX1-215ENST00000560599 PEAK1Q9H792 1746 aa24.66■■□□□ 1.54
HMBOX1-215ENST00000560599 LMOD3Q0VAK6 560 aa24.66■■□□□ 1.54
HMBOX1-215ENST00000560599 RRS1Q15050 365 aaKnown RBP24.66■■□□□ 1.54
HMBOX1-215ENST00000560599 NGDNQ8NEJ9 315 aaKnown RBP24.65■■□□□ 1.54
HMBOX1-215ENST00000560599 NPHP4O75161 1426 aaPredicted RBP24.65■■□□□ 1.54
HMBOX1-215ENST00000560599 RGPD1P0DJD0 1748 aa24.65■■□□□ 1.54
HMBOX1-215ENST00000560599 NWD1Q149M9 1564 aa24.64■■□□□ 1.54
HMBOX1-215ENST00000560599 ADGRL3Q9HAR2 1447 aa24.63■■□□□ 1.53
HMBOX1-215ENST00000560599 HMOX1P09601 288 aa24.62■■□□□ 1.53
HMBOX1-215ENST00000560599 DNAJC5Q9H3Z4 198 aa24.62■■□□□ 1.53
HMBOX1-215ENST00000560599 PMFBP1Q8TBY8 1022 aa24.61■■□□□ 1.53
HMBOX1-215ENST00000560599 TSR2Q969E8 191 aaKnown RBP24.61■■□□□ 1.53
HMBOX1-215ENST00000560599 SBNO1A3KN83 1393 aa24.6■■□□□ 1.53
HMBOX1-215ENST00000560599 EXOSC9Q06265 439 aaKnown RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms