RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 AHDC1Q5TGY3 1603 aaPredicted RBP11.21□□□□□ -0.61
CCDC33-209ENST00000560565 C11orf95C9JLR9 678 aaPredicted RBP11.21□□□□□ -0.61
CCDC33-209ENST00000560565 SAFB2Q14151 953 aaKnown RBP eCLIP11.21□□□□□ -0.61
CCDC33-209ENST00000560565 TESK2Q96S53 571 aa11.21□□□□□ -0.61
CCDC33-209ENST00000560565 ORAI2Q96SN7 254 aa11.21□□□□□ -0.61
CCDC33-209ENST00000560565 DAXXQ9UER7 740 aaPredicted RBP11.21□□□□□ -0.61
CCDC33-209ENST00000560565 TRAK1Q9UPV9 953 aa11.21□□□□□ -0.61
CCDC33-209ENST00000560565 COL16A1Q07092 1604 aaPredicted RBP11.2□□□□□ -0.62
CCDC33-209ENST00000560565 MYBBP1AQ9BQG0 1328 aaKnown RBP11.2□□□□□ -0.62
CCDC33-209ENST00000560565 NUTM2FA1L443 756 aa11.2□□□□□ -0.62
CCDC33-209ENST00000560565 RXRBP28702 533 aa11.2□□□□□ -0.62
CCDC33-209ENST00000560565 ESCO1Q5FWF5 840 aa11.2□□□□□ -0.62
CCDC33-209ENST00000560565 LRRC59Q96AG4 307 aaKnown RBP11.2□□□□□ -0.62
CCDC33-209ENST00000560565 MYOM1P52179 1685 aa11.2□□□□□ -0.62
CCDC33-209ENST00000560565 CDC42BPGQ6DT37 1551 aa11.2□□□□□ -0.62
CCDC33-209ENST00000560565 NBR1Q14596 966 aa11.19□□□□□ -0.62
CCDC33-209ENST00000560565 ZNF772Q68DY9 489 aaPredicted RBP11.19□□□□□ -0.62
CCDC33-209ENST00000560565 DDX17Q92841 729 aaKnown RBP11.19□□□□□ -0.62
CCDC33-209ENST00000560565 PUS7Q96PZ0 661 aaKnown RBP11.19□□□□□ -0.62
CCDC33-209ENST00000560565 NHSL1Q5SYE7 1610 aa11.19□□□□□ -0.62
CCDC33-209ENST00000560565 CENPJQ9HC77 1338 aaPredicted RBP11.18□□□□□ -0.62
CCDC33-209ENST00000560565 SPATA31A6Q5VVP1 1343 aa11.17□□□□□ -0.62
CCDC33-209ENST00000560565 RRP1P56182 461 aaKnown RBP11.17□□□□□ -0.62
CCDC33-209ENST00000560565 PNISRQ8TF01 805 aaKnown RBP11.17□□□□□ -0.62
CCDC33-209ENST00000560565 FOXO3O43524 673 aa11.16□□□□□ -0.62
CCDC33-209ENST00000560565 C1QTNF8P60827 252 aa11.16□□□□□ -0.62
CCDC33-209ENST00000560565 NLRP13Q86W25 1043 aa11.16□□□□□ -0.62
CCDC33-209ENST00000560565 SHPRHQ149N8 1683 aa11.16□□□□□ -0.62
CCDC33-209ENST00000560565 FMN2Q9NZ56 1722 aa11.15□□□□□ -0.62
CCDC33-209ENST00000560565 SOS2Q07890 1332 aaPredicted RBP11.15□□□□□ -0.62
CCDC33-209ENST00000560565 NPHP3Q7Z494 1330 aa11.15□□□□□ -0.62
CCDC33-209ENST00000560565 MINK1Q8N4C8 1332 aaPredicted RBP11.15□□□□□ -0.62
CCDC33-209ENST00000560565 MEX3CQ5U5Q3 659 aaKnown RBP11.15□□□□□ -0.62
CCDC33-209ENST00000560565 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.15□□□□□ -0.62
CCDC33-209ENST00000560565 RGPD8O14715 1765 aaPredicted RBP11.15□□□□□ -0.62
CCDC33-209ENST00000560565 LRP6O75581 1613 aa11.14□□□□□ -0.63
CCDC33-209ENST00000560565 NUTM2BA6NNL0 878 aaPredicted RBP11.14□□□□□ -0.63
CCDC33-209ENST00000560565 NUTM2EB1AL46 878 aaPredicted RBP11.14□□□□□ -0.63
CCDC33-209ENST00000560565 NUTM2AQ8IVF1 878 aaPredicted RBP11.14□□□□□ -0.63
CCDC33-209ENST00000560565 RCAN3Q9UKA8 241 aa11.14□□□□□ -0.63
CCDC33-209ENST00000560565 NEFMP07197 916 aa11.13□□□□□ -0.63
CCDC33-209ENST00000560565 PHF8Q9UPP1 1060 aa11.13□□□□□ -0.63
CCDC33-209ENST00000560565 WASLO00401 505 aaPredicted RBP11.12□□□□□ -0.63
CCDC33-209ENST00000560565 PDE4AP27815 886 aa11.12□□□□□ -0.63
CCDC33-209ENST00000560565 XPCQ01831 940 aaPredicted RBP11.12□□□□□ -0.63
CCDC33-209ENST00000560565 BACH2Q9BYV9 841 aa11.12□□□□□ -0.63
CCDC33-209ENST00000560565 NINLQ9Y2I6 1382 aa11.12□□□□□ -0.63
CCDC33-209ENST00000560565 ADGRB2O60241 1585 aa11.11□□□□□ -0.63
CCDC33-209ENST00000560565 EVC2Q86UK5 1308 aa11.11□□□□□ -0.63
CCDC33-209ENST00000560565 USP32Q8NFA0 1604 aa11.11□□□□□ -0.63
CCDC33-209ENST00000560565 PAK3O75914 559 aaPredicted RBP11.11□□□□□ -0.63
CCDC33-209ENST00000560565 CCDC184Q52MB2 194 aa11.11□□□□□ -0.63
CCDC33-209ENST00000560565 PNPLA6Q8IY17 1366 aa11.11□□□□□ -0.63
CCDC33-209ENST00000560565 KIF1AQ12756 1690 aa11.11□□□□□ -0.63
CCDC33-209ENST00000560565 RGS12O14924 1447 aa11.1□□□□□ -0.63
CCDC33-209ENST00000560565 ANKARQ7Z5J8 1434 aa11.1□□□□□ -0.63
CCDC33-209ENST00000560565 TULP4Q9NRJ4 1543 aa11.1□□□□□ -0.63
CCDC33-209ENST00000560565 ITSN1Q15811 1721 aa11.1□□□□□ -0.63
CCDC33-209ENST00000560565 PSME1Q06323 249 aa11.1□□□□□ -0.63
CCDC33-209ENST00000560565 KRT28Q7Z3Y7 464 aa11.1□□□□□ -0.63
CCDC33-209ENST00000560565 NGEFQ8N5V2 710 aa11.1□□□□□ -0.63
CCDC33-209ENST00000560565 PXDNQ92626 1479 aa11.1□□□□□ -0.63
CCDC33-209ENST00000560565 PMFBP1Q8TBY8 1022 aa11.09□□□□□ -0.63
CCDC33-209ENST00000560565 POLR3GLQ9BT43 218 aa11.09□□□□□ -0.63
CCDC33-209ENST00000560565 CDK19Q9BWU1 502 aa11.09□□□□□ -0.63
CCDC33-209ENST00000560565 NPC1L1Q9UHC9 1359 aa11.08□□□□□ -0.64
CCDC33-209ENST00000560565 ADAMTS2O95450 1211 aa11.08□□□□□ -0.64
CCDC33-209ENST00000560565 CENPQQ7L2Z9 268 aaPredicted RBP11.08□□□□□ -0.64
CCDC33-209ENST00000560565 NUDT16Q96DE0 195 aaKnown RBP11.08□□□□□ -0.64
CCDC33-209ENST00000560565 ANKRD26Q9UPS8 1709 aa11.08□□□□□ -0.64
CCDC33-209ENST00000560565 PRR36Q9H6K5 1346 aa11.08□□□□□ -0.64
CCDC33-209ENST00000560565 ATAD2Q6PL18 1390 aa11.07□□□□□ -0.64
CCDC33-209ENST00000560565 GSE1Q14687 1217 aa11.07□□□□□ -0.64
CCDC33-209ENST00000560565 NGDNQ8NEJ9 315 aaKnown RBP11.07□□□□□ -0.64
CCDC33-209ENST00000560565 C8orf37Q96NL8 207 aa11.07□□□□□ -0.64
CCDC33-209ENST00000560565 AKAP12Q02952 1782 aa11.07□□□□□ -0.64
CCDC33-209ENST00000560565 SPATA31A3Q5VYP0 1347 aa11.07□□□□□ -0.64
CCDC33-209ENST00000560565 AAMPQ13685 434 aa11.06□□□□□ -0.64
CCDC33-209ENST00000560565 LMOD2Q6P5Q4 547 aa11.06□□□□□ -0.64
CCDC33-209ENST00000560565 ZNF784Q8NCA9 323 aaPredicted RBP11.06□□□□□ -0.64
CCDC33-209ENST00000560565 NGLY1Q96IV0 654 aa11.06□□□□□ -0.64
CCDC33-209ENST00000560565 EP400Q96L91 3159 aa11.06□□□□□ -0.64
CCDC33-209ENST00000560565 COL22A1Q8NFW1 1626 aaPredicted RBP11.06□□□□□ -0.64
CCDC33-209ENST00000560565 PARD3Q8TEW0 1356 aa11.05□□□□□ -0.64
CCDC33-209ENST00000560565 KIF20BQ96Q89 1820 aa11.05□□□□□ -0.64
CCDC33-209ENST00000560565 PER1O15534 1290 aaPredicted RBP11.05□□□□□ -0.64
CCDC33-209ENST00000560565 SRPK2P78362 688 aaKnown RBP11.05□□□□□ -0.64
CCDC33-209ENST00000560565 CCDC61Q9Y6R9 512 aa11.05□□□□□ -0.64
CCDC33-209ENST00000560565 AFF2P51816 1311 aa11.05□□□□□ -0.64
CCDC33-209ENST00000560565 TOPAZ1Q8N9V7 1692 aa11.04□□□□□ -0.64
CCDC33-209ENST00000560565 SBNO1A3KN83 1393 aa11.04□□□□□ -0.64
CCDC33-209ENST00000560565 RSPH6AQ9H0K4 717 aa11.04□□□□□ -0.64
CCDC33-209ENST00000560565 PANK3Q9H999 370 aa11.04□□□□□ -0.64
CCDC33-209ENST00000560565 MON2Q7Z3U7 1717 aa11.04□□□□□ -0.64
CCDC33-209ENST00000560565 TNS3Q68CZ2 1445 aa11.03□□□□□ -0.64
CCDC33-209ENST00000560565 PRKCSHP14314 528 aaPredicted RBP11.03□□□□□ -0.64
CCDC33-209ENST00000560565 HAP1P54257 671 aaPredicted RBP11.03□□□□□ -0.64
CCDC33-209ENST00000560565 CABP2Q9NPB3 220 aa11.03□□□□□ -0.64
CCDC33-209ENST00000560565 ATP7BP35670 1465 aa11.03□□□□□ -0.64
CCDC33-209ENST00000560565 ARHGEF10O15013 1369 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms