RNA–Protein interactions for RNA: ENST00000560555.1

ALDH1A3-206, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 1 (best)

Gene ALDH1A3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-206ENST00000560555 CCDC61Q9Y6R9 512 aa17.3■□□□□ 0.36
ALDH1A3-206ENST00000560555 TRPM3Q9HCF6 1732 aaPredicted RBP17.3■□□□□ 0.36
ALDH1A3-206ENST00000560555 SEPT12Q8IYM1 358 aa17.29■□□□□ 0.36
ALDH1A3-206ENST00000560555 COL22A1Q8NFW1 1626 aaPredicted RBP17.29■□□□□ 0.36
ALDH1A3-206ENST00000560555 SPATA31A3Q5VYP0 1347 aa17.28■□□□□ 0.36
ALDH1A3-206ENST00000560555 ITSN1Q15811 1721 aa17.27■□□□□ 0.35
ALDH1A3-206ENST00000560555 POLR3AO14802 1390 aaPredicted RBP17.27■□□□□ 0.35
ALDH1A3-206ENST00000560555 EIF3AQ14152 1382 aaKnown RBP17.26■□□□□ 0.35
ALDH1A3-206ENST00000560555 ACEP12821 1306 aa17.25■□□□□ 0.35
ALDH1A3-206ENST00000560555 GLI3P10071 1580 aa17.25■□□□□ 0.35
ALDH1A3-206ENST00000560555 BAG6P46379 1132 aa17.25■□□□□ 0.35
ALDH1A3-206ENST00000560555 SRPK2P78362 688 aaKnown RBP17.25■□□□□ 0.35
ALDH1A3-206ENST00000560555 CABP1Q9NZU7 370 aa17.25■□□□□ 0.35
ALDH1A3-206ENST00000560555 EVC2Q86UK5 1308 aa17.24■□□□□ 0.35
ALDH1A3-206ENST00000560555 ALS2Q96Q42 1657 aa17.24■□□□□ 0.35
ALDH1A3-206ENST00000560555 YY1P25490 414 aa17.24■□□□□ 0.35
ALDH1A3-206ENST00000560555 PSME1Q06323 249 aa17.24■□□□□ 0.35
ALDH1A3-206ENST00000560555 KRT27Q7Z3Y8 459 aa17.24■□□□□ 0.35
ALDH1A3-206ENST00000560555 SLIT2O94813 1529 aa17.24■□□□□ 0.35
ALDH1A3-206ENST00000560555 SBNO1A3KN83 1393 aa17.24■□□□□ 0.35
ALDH1A3-206ENST00000560555 USP47Q96K76 1375 aa17.24■□□□□ 0.35
ALDH1A3-206ENST00000560555 ONECUT3O60422 494 aaPredicted RBP17.23■□□□□ 0.35
ALDH1A3-206ENST00000560555 PPIP5K1Q6PFW1 1433 aa17.22■□□□□ 0.35
ALDH1A3-206ENST00000560555 SSH2Q76I76 1423 aa17.22■□□□□ 0.35
ALDH1A3-206ENST00000560555 CD163L1Q9NR16 1453 aa17.21■□□□□ 0.35
ALDH1A3-206ENST00000560555 VPS72Q15906 364 aa17.21■□□□□ 0.35
ALDH1A3-206ENST00000560555 NGDNQ8NEJ9 315 aaKnown RBP17.21■□□□□ 0.35
ALDH1A3-206ENST00000560555 TNS3Q68CZ2 1445 aa17.21■□□□□ 0.34
ALDH1A3-206ENST00000560555 R3HDM1Q15032 1099 aaKnown RBP17.2■□□□□ 0.34
ALDH1A3-206ENST00000560555 CABLES1Q8TDN4 633 aa17.2■□□□□ 0.34
ALDH1A3-206ENST00000560555 PUS7Q96PZ0 661 aaKnown RBP17.2■□□□□ 0.34
ALDH1A3-206ENST00000560555 CRYBG1Q9Y4K1 1723 aa17.19■□□□□ 0.34
ALDH1A3-206ENST00000560555 AKAP12Q02952 1782 aa17.19■□□□□ 0.34
ALDH1A3-206ENST00000560555 CPSF1Q10570 1443 aaKnown RBP17.19■□□□□ 0.34
ALDH1A3-206ENST00000560555 EN1Q05925 392 aaPredicted RBP17.18■□□□□ 0.34
ALDH1A3-206ENST00000560555 SLC12A5Q9H2X9 1139 aa17.18■□□□□ 0.34
ALDH1A3-206ENST00000560555 CCDC9Q9Y3X0 531 aaKnown RBP17.18■□□□□ 0.34
ALDH1A3-206ENST00000560555 ABCA3Q99758 1704 aa17.17■□□□□ 0.34
ALDH1A3-206ENST00000560555 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.16■□□□□ 0.34
ALDH1A3-206ENST00000560555 MARF1Q9Y4F3 1742 aaKnown RBP17.16■□□□□ 0.34
ALDH1A3-206ENST00000560555 USP6P35125 1406 aa17.15■□□□□ 0.34
ALDH1A3-206ENST00000560555 C11orf95C9JLR9 678 aaPredicted RBP17.15■□□□□ 0.34
ALDH1A3-206ENST00000560555 HSPA5P11021 654 aaKnown RBP17.15■□□□□ 0.34
ALDH1A3-206ENST00000560555 BRWD3Q6RI45 1802 aa17.14■□□□□ 0.33
ALDH1A3-206ENST00000560555 A0A0G2JS52 829 aa17.13■□□□□ 0.33
ALDH1A3-206ENST00000560555 MYT1Q01538 1121 aa17.13■□□□□ 0.33
ALDH1A3-206ENST00000560555 HAP1P54257 671 aaPredicted RBP17.12■□□□□ 0.33
ALDH1A3-206ENST00000560555 MON2Q7Z3U7 1717 aa17.12■□□□□ 0.33
ALDH1A3-206ENST00000560555 NRKQ7Z2Y5 1582 aa17.11■□□□□ 0.33
ALDH1A3-206ENST00000560555 PAK3O75914 559 aaPredicted RBP17.11■□□□□ 0.33
ALDH1A3-206ENST00000560555 NUTM2GQ5VZR2 741 aa17.11■□□□□ 0.33
ALDH1A3-206ENST00000560555 LMOD2Q6P5Q4 547 aa17.11■□□□□ 0.33
ALDH1A3-206ENST00000560555 ARHGEF10O15013 1369 aa17.11■□□□□ 0.33
ALDH1A3-206ENST00000560555 FAM83GA6ND36 823 aa17.1■□□□□ 0.33
ALDH1A3-206ENST00000560555 PLEKHG5O94827 1062 aa17.1■□□□□ 0.33
ALDH1A3-206ENST00000560555 ZNF692Q9BU19 519 aaPredicted RBP17.1■□□□□ 0.33
ALDH1A3-206ENST00000560555 TTC21BQ7Z4L5 1316 aa17.1■□□□□ 0.33
ALDH1A3-206ENST00000560555 PIK3C2AO00443 1686 aa17.1■□□□□ 0.33
ALDH1A3-206ENST00000560555 EIF4G2P78344 907 aaKnown RBP eCLIP17.09■□□□□ 0.33
ALDH1A3-206ENST00000560555 TMF1P82094 1093 aa17.09■□□□□ 0.33
ALDH1A3-206ENST00000560555 EZH2Q15910 746 aaKnown RBP17.09■□□□□ 0.33
ALDH1A3-206ENST00000560555 FAM98CQ17RN3 349 aaKnown RBP17.09■□□□□ 0.33
ALDH1A3-206ENST00000560555 BRD4O60885 1362 aaPredicted RBP17.08■□□□□ 0.32
ALDH1A3-206ENST00000560555 USP19O94966 1318 aa17.08■□□□□ 0.32
ALDH1A3-206ENST00000560555 FAM182BQ5T319 152 aa17.08■□□□□ 0.32
ALDH1A3-206ENST00000560555 ABTB2Q8N961 1025 aa17.08■□□□□ 0.32
ALDH1A3-206ENST00000560555 MYOM1P52179 1685 aa17.07■□□□□ 0.32
ALDH1A3-206ENST00000560555 PHRF1Q9P1Y6 1649 aaKnown RBP17.07■□□□□ 0.32
ALDH1A3-206ENST00000560555 A0A1W2PP64 1363 aa17.07■□□□□ 0.32
ALDH1A3-206ENST00000560555 SLC24A1O60721 1099 aa17.07■□□□□ 0.32
ALDH1A3-206ENST00000560555 TMC1Q8TDI8 760 aa17.07■□□□□ 0.32
ALDH1A3-206ENST00000560555 DISP2A7MBM2 1401 aa17.05■□□□□ 0.32
ALDH1A3-206ENST00000560555 KTN1Q86UP2 1357 aaKnown RBP17.05■□□□□ 0.32
ALDH1A3-206ENST00000560555 CAMKK2Q96RR4 588 aa17.05■□□□□ 0.32
ALDH1A3-206ENST00000560555 CARD14Q9BXL6 1004 aa17.05■□□□□ 0.32
ALDH1A3-206ENST00000560555 SLIT3O75094 1523 aa17.03■□□□□ 0.32
ALDH1A3-206ENST00000560555 NME9Q86XW9 330 aa17.03■□□□□ 0.32
ALDH1A3-206ENST00000560555 USP31Q70CQ4 1352 aa17.02■□□□□ 0.32
ALDH1A3-206ENST00000560555 DCAF8L1A6NGE4 600 aa17.02■□□□□ 0.32
ALDH1A3-206ENST00000560555 GCP02774 474 aa17.02■□□□□ 0.32
ALDH1A3-206ENST00000560555 NLRP13Q86W25 1043 aa17.02■□□□□ 0.32
ALDH1A3-206ENST00000560555 TTC21AQ8NDW8 1320 aa17.01■□□□□ 0.31
ALDH1A3-206ENST00000560555 PLCH1Q4KWH8 1693 aa17.01■□□□□ 0.31
ALDH1A3-206ENST00000560555 USP54Q70EL1 1684 aa17.01■□□□□ 0.31
ALDH1A3-206ENST00000560555 NLRP6P59044 892 aa17.01■□□□□ 0.31
ALDH1A3-206ENST00000560555 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.01■□□□□ 0.31
ALDH1A3-206ENST00000560555 COL18A1P39060 1754 aa17.01■□□□□ 0.31
ALDH1A3-206ENST00000560555 ANKRD36BQ8N2N9 1353 aa17.01■□□□□ 0.31
ALDH1A3-206ENST00000560555 NINLQ9Y2I6 1382 aa17.01■□□□□ 0.31
ALDH1A3-206ENST00000560555 ZC3H6P61129 1189 aaKnown RBP17■□□□□ 0.31
ALDH1A3-206ENST00000560555 NRAPQ86VF7 1730 aa17■□□□□ 0.31
ALDH1A3-206ENST00000560555 BTG4Q9NY30 223 aa17■□□□□ 0.31
ALDH1A3-206ENST00000560555 KIAA0232Q92628 1395 aa17■□□□□ 0.31
ALDH1A3-206ENST00000560555 NWD2Q9ULI1 1742 aa16.99■□□□□ 0.31
ALDH1A3-206ENST00000560555 EDC4Q6P2E9 1401 aaKnown RBP16.99■□□□□ 0.31
ALDH1A3-206ENST00000560555 TRIM37O94972 964 aa16.99■□□□□ 0.31
ALDH1A3-206ENST00000560555 CHRNA2Q15822 529 aa16.99■□□□□ 0.31
ALDH1A3-206ENST00000560555 IFFO2Q5TF58 517 aa16.99■□□□□ 0.31
ALDH1A3-206ENST00000560555 TERF2IPQ9NYB0 399 aa16.99■□□□□ 0.31
ALDH1A3-206ENST00000560555 CAMTA1Q9Y6Y1 1673 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms