RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 ILDR2Q71H61 639 aa19.46■□□□□ 0.71
PKNOX1-209ENST00000560448 TMC1Q8TDI8 760 aa19.46■□□□□ 0.71
PKNOX1-209ENST00000560448 MON2Q7Z3U7 1717 aa19.46■□□□□ 0.71
PKNOX1-209ENST00000560448 KTN1Q86UP2 1357 aaKnown RBP19.46■□□□□ 0.71
PKNOX1-209ENST00000560448 LRP6O75581 1613 aa19.45■□□□□ 0.7
PKNOX1-209ENST00000560448 MEX3CQ5U5Q3 659 aaKnown RBP19.44■□□□□ 0.7
PKNOX1-209ENST00000560448 ANKRD36BQ8N2N9 1353 aa19.44■□□□□ 0.7
PKNOX1-209ENST00000560448 CD163L1Q9NR16 1453 aa19.44■□□□□ 0.7
PKNOX1-209ENST00000560448 LMOD2Q6P5Q4 547 aa19.43■□□□□ 0.7
PKNOX1-209ENST00000560448 SLC12A5Q9H2X9 1139 aa19.43■□□□□ 0.7
PKNOX1-209ENST00000560448 NRKQ7Z2Y5 1582 aa19.43■□□□□ 0.7
PKNOX1-209ENST00000560448 EDC4Q6P2E9 1401 aaKnown RBP19.43■□□□□ 0.7
PKNOX1-209ENST00000560448 NLRP13Q86W25 1043 aa19.42■□□□□ 0.7
PKNOX1-209ENST00000560448 PHF23Q9BUL5 403 aaPredicted RBP19.42■□□□□ 0.7
PKNOX1-209ENST00000560448 ABTB2Q8N961 1025 aa19.42■□□□□ 0.7
PKNOX1-209ENST00000560448 A0A1W2PP64 1363 aa19.41■□□□□ 0.7
PKNOX1-209ENST00000560448 NUTM2BA6NNL0 878 aaPredicted RBP19.41■□□□□ 0.7
PKNOX1-209ENST00000560448 NUTM2EB1AL46 878 aaPredicted RBP19.41■□□□□ 0.7
PKNOX1-209ENST00000560448 HAP1P54257 671 aaPredicted RBP19.41■□□□□ 0.7
PKNOX1-209ENST00000560448 NUTM2AQ8IVF1 878 aaPredicted RBP19.41■□□□□ 0.7
PKNOX1-209ENST00000560448 ABCA3Q99758 1704 aa19.4■□□□□ 0.7
PKNOX1-209ENST00000560448 MARF1Q9Y4F3 1742 aaKnown RBP19.4■□□□□ 0.7
PKNOX1-209ENST00000560448 TTC21BQ7Z4L5 1316 aa19.4■□□□□ 0.7
PKNOX1-209ENST00000560448 CRYBG1Q9Y4K1 1723 aa19.38■□□□□ 0.69
PKNOX1-209ENST00000560448 USP19O94966 1318 aa19.38■□□□□ 0.69
PKNOX1-209ENST00000560448 ZNF772Q68DY9 489 aaPredicted RBP19.38■□□□□ 0.69
PKNOX1-209ENST00000560448 MYOM1P52179 1685 aa19.37■□□□□ 0.69
PKNOX1-209ENST00000560448 USP31Q70CQ4 1352 aa19.36■□□□□ 0.69
PKNOX1-209ENST00000560448 USP54Q70EL1 1684 aa19.36■□□□□ 0.69
PKNOX1-209ENST00000560448 PIK3C2AO00443 1686 aa19.36■□□□□ 0.69
PKNOX1-209ENST00000560448 PHRF1Q9P1Y6 1649 aaKnown RBP19.35■□□□□ 0.69
PKNOX1-209ENST00000560448 NLRP6P59044 892 aa19.35■□□□□ 0.69
PKNOX1-209ENST00000560448 SOCS7O14512 581 aa19.34■□□□□ 0.69
PKNOX1-209ENST00000560448 ADAMTS2O95450 1211 aa19.34■□□□□ 0.69
PKNOX1-209ENST00000560448 FNBP4Q8N3X1 1017 aaPredicted RBP19.34■□□□□ 0.69
PKNOX1-209ENST00000560448 KCNH5Q8NCM2 988 aa19.34■□□□□ 0.69
PKNOX1-209ENST00000560448 C8orf37Q96NL8 207 aa19.34■□□□□ 0.69
PKNOX1-209ENST00000560448 SLIT3O75094 1523 aa19.34■□□□□ 0.69
PKNOX1-209ENST00000560448 NGLY1Q96IV0 654 aa19.34■□□□□ 0.69
PKNOX1-209ENST00000560448 CPDO75976 1380 aa19.33■□□□□ 0.69
PKNOX1-209ENST00000560448 CABLES1Q8TDN4 633 aa19.32■□□□□ 0.68
PKNOX1-209ENST00000560448 AFF2P51816 1311 aa19.31■□□□□ 0.68
PKNOX1-209ENST00000560448 NWD2Q9ULI1 1742 aa19.31■□□□□ 0.68
PKNOX1-209ENST00000560448 GCP02774 474 aa19.31■□□□□ 0.68
PKNOX1-209ENST00000560448 COL14A1Q05707 1796 aaKnown RBP19.31■□□□□ 0.68
PKNOX1-209ENST00000560448 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.3■□□□□ 0.68
PKNOX1-209ENST00000560448 KIF7Q2M1P5 1343 aa19.3■□□□□ 0.68
PKNOX1-209ENST00000560448 SLIT2O94813 1529 aa19.3■□□□□ 0.68
PKNOX1-209ENST00000560448 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.29■□□□□ 0.68
PKNOX1-209ENST00000560448 NUTM2GQ5VZR2 741 aa19.28■□□□□ 0.68
PKNOX1-209ENST00000560448 PRDM11Q9NQV5 511 aa19.28■□□□□ 0.68
PKNOX1-209ENST00000560448 RGS17Q9UGC6 210 aaPredicted RBP19.28■□□□□ 0.68
PKNOX1-209ENST00000560448 OVOS2A0A0J9YW53 1432 aa19.28■□□□□ 0.68
PKNOX1-209ENST00000560448 OVOS2Q6IE36 1432 aa19.28■□□□□ 0.68
PKNOX1-209ENST00000560448 POLR3GLQ9BT43 218 aa19.27■□□□□ 0.68
PKNOX1-209ENST00000560448 USP21Q9UK80 565 aa19.27■□□□□ 0.68
PKNOX1-209ENST00000560448 ABCC6O95255 1503 aa19.27■□□□□ 0.68
PKNOX1-209ENST00000560448 C11orf95C9JLR9 678 aaPredicted RBP19.26■□□□□ 0.67
PKNOX1-209ENST00000560448 TRPC5Q9UL62 973 aaPredicted RBP19.26■□□□□ 0.67
PKNOX1-209ENST00000560448 NSD3Q9BZ95 1437 aa19.26■□□□□ 0.67
PKNOX1-209ENST00000560448 PLCH1Q4KWH8 1693 aa19.26■□□□□ 0.67
PKNOX1-209ENST00000560448 CGNL1Q0VF96 1302 aa19.26■□□□□ 0.67
PKNOX1-209ENST00000560448 KIAA0232Q92628 1395 aa19.26■□□□□ 0.67
PKNOX1-209ENST00000560448 CCDC7Q96M83 1385 aa19.26■□□□□ 0.67
PKNOX1-209ENST00000560448 FAM83GA6ND36 823 aa19.25■□□□□ 0.67
PKNOX1-209ENST00000560448 NME9Q86XW9 330 aa19.25■□□□□ 0.67
PKNOX1-209ENST00000560448 UNC5CLQ8IV45 518 aa19.25■□□□□ 0.67
PKNOX1-209ENST00000560448 COG3Q96JB2 828 aa19.25■□□□□ 0.67
PKNOX1-209ENST00000560448 BCL9LQ86UU0 1499 aa19.25■□□□□ 0.67
PKNOX1-209ENST00000560448 NSD2O96028 1365 aa19.24■□□□□ 0.67
PKNOX1-209ENST00000560448 KIF20BQ96Q89 1820 aa19.23■□□□□ 0.67
PKNOX1-209ENST00000560448 NFAT5O94916 1531 aa19.23■□□□□ 0.67
PKNOX1-209ENST00000560448 AATKQ6ZMQ8 1374 aa19.23■□□□□ 0.67
PKNOX1-209ENST00000560448 FYB1O15117 783 aa19.23■□□□□ 0.67
PKNOX1-209ENST00000560448 PLEKHG5O94827 1062 aa19.23■□□□□ 0.67
PKNOX1-209ENST00000560448 CARD14Q9BXL6 1004 aa19.23■□□□□ 0.67
PKNOX1-209ENST00000560448 ATRNO75882 1429 aa19.22■□□□□ 0.67
PKNOX1-209ENST00000560448 ZC3H6P61129 1189 aaKnown RBP19.22■□□□□ 0.67
PKNOX1-209ENST00000560448 PANK3Q9H999 370 aa19.22■□□□□ 0.67
PKNOX1-209ENST00000560448 WASHC2AQ641Q2 1341 aa19.22■□□□□ 0.67
PKNOX1-209ENST00000560448 CDK12Q9NYV4 1490 aaPredicted RBP19.21■□□□□ 0.67
PKNOX1-209ENST00000560448 ARHGEF25Q86VW2 580 aa19.21■□□□□ 0.67
PKNOX1-209ENST00000560448 QTRT2Q9H974 415 aaKnown RBP19.21■□□□□ 0.67
PKNOX1-209ENST00000560448 LMO7Q8WWI1 1683 aa19.21■□□□□ 0.67
PKNOX1-209ENST00000560448 RBM6P78332 1123 aaKnown RBP19.2■□□□□ 0.66
PKNOX1-209ENST00000560448 POTEAQ6S8J7 498 aa19.2■□□□□ 0.66
PKNOX1-209ENST00000560448 BTG4Q9NY30 223 aa19.2■□□□□ 0.66
PKNOX1-209ENST00000560448 RXRBP28702 533 aa19.19■□□□□ 0.66
PKNOX1-209ENST00000560448 VPS72Q15906 364 aa19.19■□□□□ 0.66
PKNOX1-209ENST00000560448 NRAPQ86VF7 1730 aa19.19■□□□□ 0.66
PKNOX1-209ENST00000560448 KNSTRNQ9Y448 316 aa19.18■□□□□ 0.66
PKNOX1-209ENST00000560448 ZNF316A6NFI3 1004 aaPredicted RBP19.17■□□□□ 0.66
PKNOX1-209ENST00000560448 KIF24Q5T7B8 1368 aa19.17■□□□□ 0.66
PKNOX1-209ENST00000560448 GJD4Q96KN9 370 aaPredicted RBP19.17■□□□□ 0.66
PKNOX1-209ENST00000560448 GGNBP2Q9H3C7 697 aa19.17■□□□□ 0.66
PKNOX1-209ENST00000560448 ZRANB1Q9UGI0 708 aa19.17■□□□□ 0.66
PKNOX1-209ENST00000560448 ANKRD26Q9UPS8 1709 aa19.17■□□□□ 0.66
PKNOX1-209ENST00000560448 COL18A1P39060 1754 aa19.15■□□□□ 0.66
PKNOX1-209ENST00000560448 CAMTA1Q9Y6Y1 1673 aa19.15■□□□□ 0.66
PKNOX1-209ENST00000560448 BLMP54132 1417 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms