RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 COL14A1Q05707 1796 aaKnown RBP20.15■□□□□ 0.82
TPM1-223ENST00000560445 TRPM1Q7Z4N2 1603 aa20.14■□□□□ 0.81
TPM1-223ENST00000560445 ROCK2O75116 1388 aaKnown RBP20.14■□□□□ 0.81
TPM1-223ENST00000560445 CCDC125Q86Z20 511 aa20.14■□□□□ 0.81
TPM1-223ENST00000560445 PLEKHG3A1L390 1219 aa20.13■□□□□ 0.81
TPM1-223ENST00000560445 NEUROD1Q13562 356 aa20.13■□□□□ 0.81
TPM1-223ENST00000560445 CCDC9Q9Y3X0 531 aaKnown RBP20.13■□□□□ 0.81
TPM1-223ENST00000560445 PLEKHG5O94827 1062 aa20.12■□□□□ 0.81
TPM1-223ENST00000560445 ACEP12821 1306 aa20.11■□□□□ 0.81
TPM1-223ENST00000560445 EVC2Q86UK5 1308 aa20.11■□□□□ 0.81
TPM1-223ENST00000560445 GLI3P10071 1580 aa20.1■□□□□ 0.81
TPM1-223ENST00000560445 SIN3AQ96ST3 1273 aa20.1■□□□□ 0.81
TPM1-223ENST00000560445 PPIP5K1Q6PFW1 1433 aa20.1■□□□□ 0.81
TPM1-223ENST00000560445 NBPF8Q3BBV2 869 aa20.09■□□□□ 0.81
TPM1-223ENST00000560445 PRDM11Q9NQV5 511 aa20.09■□□□□ 0.81
TPM1-223ENST00000560445 TONSLQ96HA7 1378 aa20.08■□□□□ 0.81
TPM1-223ENST00000560445 CRYBG1Q9Y4K1 1723 aa20.08■□□□□ 0.81
TPM1-223ENST00000560445 FAM83GA6ND36 823 aa20.08■□□□□ 0.81
TPM1-223ENST00000560445 TRIM26Q12899 539 aaPredicted RBP20.08■□□□□ 0.81
TPM1-223ENST00000560445 BTG4Q9NY30 223 aa20.07■□□□□ 0.8
TPM1-223ENST00000560445 NRAPQ86VF7 1730 aa20.06■□□□□ 0.8
TPM1-223ENST00000560445 PHRF1Q9P1Y6 1649 aaKnown RBP20.05■□□□□ 0.8
TPM1-223ENST00000560445 ABTB2Q8N961 1025 aa20.05■□□□□ 0.8
TPM1-223ENST00000560445 A0A0G2JS52 829 aa20.04■□□□□ 0.8
TPM1-223ENST00000560445 ONECUT3O60422 494 aaPredicted RBP20.04■□□□□ 0.8
TPM1-223ENST00000560445 MYT1Q01538 1121 aa20.04■□□□□ 0.8
TPM1-223ENST00000560445 NLRP13Q86W25 1043 aa20.04■□□□□ 0.8
TPM1-223ENST00000560445 SEPT12Q8IYM1 358 aa20.04■□□□□ 0.8
TPM1-223ENST00000560445 SF3B2Q13435 895 aaKnown RBP20.03■□□□□ 0.8
TPM1-223ENST00000560445 CABP2Q9NPB3 220 aa20.03■□□□□ 0.8
TPM1-223ENST00000560445 SBNO2Q9Y2G9 1366 aa20.02■□□□□ 0.8
TPM1-223ENST00000560445 BLMP54132 1417 aaPredicted RBP20.02■□□□□ 0.79
TPM1-223ENST00000560445 KIAA0232Q92628 1395 aa20.01■□□□□ 0.79
TPM1-223ENST00000560445 ZNF692Q9BU19 519 aaPredicted RBP20.01■□□□□ 0.79
TPM1-223ENST00000560445 CPDO75976 1380 aa20■□□□□ 0.79
TPM1-223ENST00000560445 SLC24A1O60721 1099 aa20■□□□□ 0.79
TPM1-223ENST00000560445 KRT27Q7Z3Y8 459 aa20■□□□□ 0.79
TPM1-223ENST00000560445 USP6P35125 1406 aa20■□□□□ 0.79
TPM1-223ENST00000560445 USP19O94966 1318 aa20■□□□□ 0.79
TPM1-223ENST00000560445 CARD11Q9BXL7 1154 aa19.99■□□□□ 0.79
TPM1-223ENST00000560445 BRWD3Q6RI45 1802 aa19.99■□□□□ 0.79
TPM1-223ENST00000560445 NRKQ7Z2Y5 1582 aa19.99■□□□□ 0.79
TPM1-223ENST00000560445 SPATA31A5Q5VU36 1347 aa19.99■□□□□ 0.79
TPM1-223ENST00000560445 SPATA31A7Q8IWB4 1347 aa19.99■□□□□ 0.79
TPM1-223ENST00000560445 CABP1Q9NZU7 370 aa19.98■□□□□ 0.79
TPM1-223ENST00000560445 EP400Q96L91 3159 aa19.96■□□□□ 0.79
TPM1-223ENST00000560445 EVA1CP58658 441 aa19.96■□□□□ 0.79
TPM1-223ENST00000560445 FAM98CQ17RN3 349 aaKnown RBP19.96■□□□□ 0.79
TPM1-223ENST00000560445 NUTM2GQ5VZR2 741 aa19.96■□□□□ 0.79
TPM1-223ENST00000560445 ZC3H6P61129 1189 aaKnown RBP19.95■□□□□ 0.78
TPM1-223ENST00000560445 ZRANB1Q9UGI0 708 aa19.95■□□□□ 0.78
TPM1-223ENST00000560445 GCP02774 474 aa19.94■□□□□ 0.78
TPM1-223ENST00000560445 TTC21AQ8NDW8 1320 aa19.94■□□□□ 0.78
TPM1-223ENST00000560445 NLRP6P59044 892 aa19.93■□□□□ 0.78
TPM1-223ENST00000560445 STRN4Q9NRL3 753 aa19.93■□□□□ 0.78
TPM1-223ENST00000560445 SPATA31A1Q5TZJ5 1347 aa19.93■□□□□ 0.78
TPM1-223ENST00000560445 CHRNA2Q15822 529 aa19.92■□□□□ 0.78
TPM1-223ENST00000560445 SSH2Q76I76 1423 aa19.92■□□□□ 0.78
TPM1-223ENST00000560445 THSD7AQ9UPZ6 1657 aa19.91■□□□□ 0.78
TPM1-223ENST00000560445 AKAP12Q02952 1782 aa19.91■□□□□ 0.78
TPM1-223ENST00000560445 KCNH5Q8NCM2 988 aa19.91■□□□□ 0.78
TPM1-223ENST00000560445 PUS7Q96PZ0 661 aaKnown RBP19.9■□□□□ 0.78
TPM1-223ENST00000560445 THRAP3Q9Y2W1 955 aaKnown RBP19.9■□□□□ 0.78
TPM1-223ENST00000560445 SLIT3O75094 1523 aa19.9■□□□□ 0.78
TPM1-223ENST00000560445 BARGINQ6ZT62 677 aa19.89■□□□□ 0.77
TPM1-223ENST00000560445 KTN1Q86UP2 1357 aaKnown RBP19.89■□□□□ 0.77
TPM1-223ENST00000560445 LMO7Q8WWI1 1683 aa19.89■□□□□ 0.77
TPM1-223ENST00000560445 AATKQ6ZMQ8 1374 aa19.88■□□□□ 0.77
TPM1-223ENST00000560445 NINLQ9Y2I6 1382 aa19.88■□□□□ 0.77
TPM1-223ENST00000560445 C11orf95C9JLR9 678 aaPredicted RBP19.88■□□□□ 0.77
TPM1-223ENST00000560445 BAG6P46379 1132 aa19.88■□□□□ 0.77
TPM1-223ENST00000560445 RGPD1P0DJD0 1748 aa19.88■□□□□ 0.77
TPM1-223ENST00000560445 PIK3C2AO00443 1686 aa19.87■□□□□ 0.77
TPM1-223ENST00000560445 CPSF1Q10570 1443 aaKnown RBP19.87■□□□□ 0.77
TPM1-223ENST00000560445 TTC21BQ7Z4L5 1316 aa19.87■□□□□ 0.77
TPM1-223ENST00000560445 HDGFL2Q7Z4V5 671 aaPredicted RBP19.87■□□□□ 0.77
TPM1-223ENST00000560445 TCP11L2Q8N4U5 519 aa19.87■□□□□ 0.77
TPM1-223ENST00000560445 MON2Q7Z3U7 1717 aa19.86■□□□□ 0.77
TPM1-223ENST00000560445 TERF2IPQ9NYB0 399 aa19.86■□□□□ 0.77
TPM1-223ENST00000560445 CAMTA1Q9Y6Y1 1673 aa19.86■□□□□ 0.77
TPM1-223ENST00000560445 COL5A2P05997 1499 aaPredicted RBP19.85■□□□□ 0.77
TPM1-223ENST00000560445 PDE3BQ13370 1112 aa19.84■□□□□ 0.77
TPM1-223ENST00000560445 FAM196AQ6ZSG2 479 aa19.84■□□□□ 0.77
TPM1-223ENST00000560445 ABCC6O95255 1503 aa19.84■□□□□ 0.77
TPM1-223ENST00000560445 CRB1P82279 1406 aa19.84■□□□□ 0.77
TPM1-223ENST00000560445 CLSPNQ9HAW4 1339 aa19.83■□□□□ 0.77
TPM1-223ENST00000560445 ZBTB7CA1YPR0 619 aa19.83■□□□□ 0.77
TPM1-223ENST00000560445 USP35Q9P2H5 1018 aa19.83■□□□□ 0.77
TPM1-223ENST00000560445 TIMELESSQ9UNS1 1208 aa19.83■□□□□ 0.77
TPM1-223ENST00000560445 TMC1Q8TDI8 760 aa19.82■□□□□ 0.76
TPM1-223ENST00000560445 LARP1Q6PKG0 1096 aaKnown RBP19.81■□□□□ 0.76
TPM1-223ENST00000560445 EDC4Q6P2E9 1401 aaKnown RBP19.8■□□□□ 0.76
TPM1-223ENST00000560445 CDCA7Q9BWT1 371 aaPredicted RBP19.8■□□□□ 0.76
TPM1-223ENST00000560445 DISP2A7MBM2 1401 aa19.79■□□□□ 0.76
TPM1-223ENST00000560445 USP54Q70EL1 1684 aa19.79■□□□□ 0.76
TPM1-223ENST00000560445 PARP4Q9UKK3 1724 aaKnown RBP19.79■□□□□ 0.76
TPM1-223ENST00000560445 CDCA8Q53HL2 280 aa19.78■□□□□ 0.76
TPM1-223ENST00000560445 TOM1L2Q6ZVM7 507 aa19.78■□□□□ 0.76
TPM1-223ENST00000560445 DEFB132Q7Z7B7 95 aa19.78■□□□□ 0.76
TPM1-223ENST00000560445 USP31Q70CQ4 1352 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 184.3 ms