RNA–Protein interactions for RNA: ENST00000560336.6

LINC00520-206, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 883 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-206ENST00000560336 KIAA0556O60303 1618 aa12.02□□□□□ -0.49
LINC00520-206ENST00000560336 MOXD2PA6NHM9 499 aa12.02□□□□□ -0.49
LINC00520-206ENST00000560336 NDUFV2P19404 249 aa12.02□□□□□ -0.49
LINC00520-206ENST00000560336 TBC1D2Q9BYX2 928 aa12.02□□□□□ -0.49
LINC00520-206ENST00000560336 GPBP1L1Q9HC44 474 aaPredicted RBP12.02□□□□□ -0.49
LINC00520-206ENST00000560336 TTBK1Q5TCY1 1321 aaPredicted RBP12.02□□□□□ -0.49
LINC00520-206ENST00000560336 FDX1P10109 184 aa12.01□□□□□ -0.49
LINC00520-206ENST00000560336 TIAM1Q13009 1591 aa12.01□□□□□ -0.49
LINC00520-206ENST00000560336 PRKD2Q9BZL6 878 aa12□□□□□ -0.49
LINC00520-206ENST00000560336 PRDM9Q9NQV7 894 aa12□□□□□ -0.49
LINC00520-206ENST00000560336 PCDHGC3Q9UN70 934 aa12□□□□□ -0.49
LINC00520-206ENST00000560336 FMN1Q68DA7 1419 aa12□□□□□ -0.49
LINC00520-206ENST00000560336 SYMPKQ92797 1274 aaKnown RBP11.99□□□□□ -0.49
LINC00520-206ENST00000560336 NUP160Q12769 1436 aa11.99□□□□□ -0.49
LINC00520-206ENST00000560336 FYCO1Q9BQS8 1478 aa11.99□□□□□ -0.49
LINC00520-206ENST00000560336 ANKLE1Q8NAG6 615 aa11.98□□□□□ -0.49
LINC00520-206ENST00000560336 USB1Q9BQ65 265 aaKnown RBP11.98□□□□□ -0.49
LINC00520-206ENST00000560336 KDM4CQ9H3R0 1056 aa11.98□□□□□ -0.49
LINC00520-206ENST00000560336 HECW1Q76N89 1606 aa11.97□□□□□ -0.49
LINC00520-206ENST00000560336 DIXDC1Q155Q3 683 aa11.97□□□□□ -0.49
LINC00520-206ENST00000560336 MSS51Q4VC12 460 aa11.97□□□□□ -0.49
LINC00520-206ENST00000560336 ATP1B4Q9UN42 357 aaPredicted RBP11.96□□□□□ -0.49
LINC00520-206ENST00000560336 MAP3K1Q13233 1512 aa11.96□□□□□ -0.5
LINC00520-206ENST00000560336 CASKIN1Q8WXD9 1431 aa11.95□□□□□ -0.5
LINC00520-206ENST00000560336 RAPGEF6Q8TEU7 1601 aa11.94□□□□□ -0.5
LINC00520-206ENST00000560336 C6orf229H3BNL8 230 aa11.94□□□□□ -0.5
LINC00520-206ENST00000560336 RSBN1LQ6PCB5 846 aaPredicted RBP11.94□□□□□ -0.5
LINC00520-206ENST00000560336 DISP1Q96F81 1524 aa11.94□□□□□ -0.5
LINC00520-206ENST00000560336 SHROOM2Q13796 1616 aa11.93□□□□□ -0.5
LINC00520-206ENST00000560336 PLA2G2CQ5R387 149 aa11.93□□□□□ -0.5
LINC00520-206ENST00000560336 EMID1Q96A84 441 aaPredicted RBP11.93□□□□□ -0.5
LINC00520-206ENST00000560336 V9GY48 417 aaPredicted RBP11.93□□□□□ -0.5
LINC00520-206ENST00000560336 MYSM1Q5VVJ2 828 aa11.92□□□□□ -0.5
LINC00520-206ENST00000560336 RIC3Q7Z5B4 369 aa11.92□□□□□ -0.5
LINC00520-206ENST00000560336 FCF1Q9Y324 198 aaKnown RBP11.92□□□□□ -0.5
LINC00520-206ENST00000560336 CARMIL2Q6F5E8 1435 aa11.92□□□□□ -0.5
LINC00520-206ENST00000560336 SPTLC1O15269 473 aa11.91□□□□□ -0.5
LINC00520-206ENST00000560336 SLC19A1P41440 591 aa11.91□□□□□ -0.5
LINC00520-206ENST00000560336 RETREG3Q86VR2 466 aa11.91□□□□□ -0.5
LINC00520-206ENST00000560336 FAM117AQ9C073 453 aa11.91□□□□□ -0.5
LINC00520-206ENST00000560336 PCDHB15Q9Y5E8 787 aa11.91□□□□□ -0.5
LINC00520-206ENST00000560336 GJA5P36382 358 aa11.9□□□□□ -0.5
LINC00520-206ENST00000560336 MMP16P51512 607 aa11.9□□□□□ -0.5
LINC00520-206ENST00000560336 LIAT1Q6ZQX7 453 aa11.9□□□□□ -0.5
LINC00520-206ENST00000560336 SUPT6HQ7KZ85 1726 aaKnown RBP11.9□□□□□ -0.5
LINC00520-206ENST00000560336 NEUROD2Q15784 382 aa11.89□□□□□ -0.51
LINC00520-206ENST00000560336 CCDC18Q5T9S5 1454 aa11.89□□□□□ -0.51
LINC00520-206ENST00000560336 LRRC9Q6ZRR7 1453 aa11.89□□□□□ -0.51
LINC00520-206ENST00000560336 CLASP1Q7Z460 1538 aa11.88□□□□□ -0.51
LINC00520-206ENST00000560336 DXOO77932 396 aaKnown RBP11.88□□□□□ -0.51
LINC00520-206ENST00000560336 PRKCSHP14314 528 aaPredicted RBP11.88□□□□□ -0.51
LINC00520-206ENST00000560336 MTMR2Q13614 643 aa11.88□□□□□ -0.51
LINC00520-206ENST00000560336 CSPP1Q1MSJ5 1256 aa11.88□□□□□ -0.51
LINC00520-206ENST00000560336 LIMD1Q9UGP4 676 aa11.88□□□□□ -0.51
LINC00520-206ENST00000560336 KANK4Q5T7N3 995 aaPredicted RBP11.87□□□□□ -0.51
LINC00520-206ENST00000560336 RSPH6AQ9H0K4 717 aa11.87□□□□□ -0.51
LINC00520-206ENST00000560336 JUNDP17535 347 aa11.86□□□□□ -0.51
LINC00520-206ENST00000560336 DDRGK1Q96HY6 314 aa11.86□□□□□ -0.51
LINC00520-206ENST00000560336 POLR3EQ9NVU0 708 aa11.86□□□□□ -0.51
LINC00520-206ENST00000560336 PLEKHG3A1L390 1219 aa11.85□□□□□ -0.51
LINC00520-206ENST00000560336 SPRYD7Q5W111 196 aa11.85□□□□□ -0.51
LINC00520-206ENST00000560336 PRR7Q8TB68 274 aa11.85□□□□□ -0.51
LINC00520-206ENST00000560336 IRX2Q9BZI1 471 aaPredicted RBP11.85□□□□□ -0.51
LINC00520-206ENST00000560336 EHBP1L1Q8N3D4 1523 aa11.85□□□□□ -0.51
LINC00520-206ENST00000560336 PRG4Q92954 1404 aaPredicted RBP11.85□□□□□ -0.51
LINC00520-206ENST00000560336 HRCP23327 699 aa11.84□□□□□ -0.51
LINC00520-206ENST00000560336 BRPF1P55201 1214 aaPredicted RBP11.84□□□□□ -0.51
LINC00520-206ENST00000560336 CABLES1Q8TDN4 633 aa11.84□□□□□ -0.51
LINC00520-206ENST00000560336 EPRSP07814 1512 aaKnown RBP11.83□□□□□ -0.52
LINC00520-206ENST00000560336 CDK13Q14004 1512 aaKnown RBP11.83□□□□□ -0.52
LINC00520-206ENST00000560336 SPDYE5A6NIY4 337 aa11.83□□□□□ -0.52
LINC00520-206ENST00000560336 CLK2P49760 499 aaKnown RBP11.83□□□□□ -0.52
LINC00520-206ENST00000560336 ZBTB3Q9H5J0 574 aa11.83□□□□□ -0.52
LINC00520-206ENST00000560336 QPCTQ16769 361 aa11.82□□□□□ -0.52
LINC00520-206ENST00000560336 CCDC24Q8N4L8 307 aa11.82□□□□□ -0.52
LINC00520-206ENST00000560336 MTUS2Q5JR59 1369 aa11.81□□□□□ -0.52
LINC00520-206ENST00000560336 ABCA8O94911 1581 aa11.81□□□□□ -0.52
LINC00520-206ENST00000560336 PRPF38BQ5VTL8 546 aaKnown RBP11.81□□□□□ -0.52
LINC00520-206ENST00000560336 ERCC6L2Q5T890 1561 aa11.8□□□□□ -0.52
LINC00520-206ENST00000560336 CFAP99D6REC4 459 aa11.8□□□□□ -0.52
LINC00520-206ENST00000560336 RPIAP49247 311 aa11.8□□□□□ -0.52
LINC00520-206ENST00000560336 TUSC1Q2TAM9 212 aa11.8□□□□□ -0.52
LINC00520-206ENST00000560336 ZNF598Q86UK7 904 aaKnown RBP11.8□□□□□ -0.52
LINC00520-206ENST00000560336 NUP153P49790 1475 aaKnown RBP11.79□□□□□ -0.52
LINC00520-206ENST00000560336 PLB1Q6P1J6 1458 aa11.79□□□□□ -0.52
LINC00520-206ENST00000560336 NUTM2BA6NNL0 878 aaPredicted RBP11.79□□□□□ -0.52
LINC00520-206ENST00000560336 NUTM2EB1AL46 878 aaPredicted RBP11.79□□□□□ -0.52
LINC00520-206ENST00000560336 ZBTB24O43167 697 aaPredicted RBP11.79□□□□□ -0.52
LINC00520-206ENST00000560336 ZNF697Q5TEC3 545 aa11.79□□□□□ -0.52
LINC00520-206ENST00000560336 NUTM2DQ5VT03 806 aaPredicted RBP11.79□□□□□ -0.52
LINC00520-206ENST00000560336 NUTM2AQ8IVF1 878 aaPredicted RBP11.79□□□□□ -0.52
LINC00520-206ENST00000560336 MAGI3Q5TCQ9 1506 aa11.79□□□□□ -0.52
LINC00520-206ENST00000560336 LILRB3O75022 631 aa11.78□□□□□ -0.52
LINC00520-206ENST00000560336 SKIV2LQ15477 1246 aaKnown RBP11.78□□□□□ -0.52
LINC00520-206ENST00000560336 SH3D19Q5HYK7 790 aa11.78□□□□□ -0.52
LINC00520-206ENST00000560336 NUDT12Q9BQG2 462 aa11.78□□□□□ -0.52
LINC00520-206ENST00000560336 ADCY10Q96PN6 1610 aa11.78□□□□□ -0.52
LINC00520-206ENST00000560336 ITSN2Q9NZM3 1697 aa11.78□□□□□ -0.52
LINC00520-206ENST00000560336 GFRA3O60609 400 aa11.77□□□□□ -0.53
LINC00520-206ENST00000560336 PROCA1Q8NCQ7 364 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms