RNA–Protein interactions for RNA: ENST00000560253.1

MEIS3-208, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,060 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-208ENST00000560253 SLC24A1O60721 1099 aa21.12■□□□□ 0.97
MEIS3-208ENST00000560253 QRICH2Q9H0J4 1663 aa21.12■□□□□ 0.97
MEIS3-208ENST00000560253 POLR3AO14802 1390 aaPredicted RBP21.1■□□□□ 0.97
MEIS3-208ENST00000560253 PPIP5K1Q6PFW1 1433 aa21.1■□□□□ 0.97
MEIS3-208ENST00000560253 UNC5CLQ8IV45 518 aa21.09■□□□□ 0.97
MEIS3-208ENST00000560253 CABP1Q9NZU7 370 aa21.09■□□□□ 0.97
MEIS3-208ENST00000560253 BRD4O60885 1362 aaPredicted RBP21.09■□□□□ 0.97
MEIS3-208ENST00000560253 RALGAPBQ86X10 1494 aa21.08■□□□□ 0.97
MEIS3-208ENST00000560253 ABTB2Q8N961 1025 aa21.07■□□□□ 0.96
MEIS3-208ENST00000560253 ZNF692Q9BU19 519 aaPredicted RBP21.07■□□□□ 0.96
MEIS3-208ENST00000560253 MARF1Q9Y4F3 1742 aaKnown RBP21.07■□□□□ 0.96
MEIS3-208ENST00000560253 CCER1Q8TC90 406 aaPredicted RBP21.06■□□□□ 0.96
MEIS3-208ENST00000560253 NLRP13Q86W25 1043 aa21.05■□□□□ 0.96
MEIS3-208ENST00000560253 TRPM3Q9HCF6 1732 aaPredicted RBP21.04■□□□□ 0.96
MEIS3-208ENST00000560253 GJD4Q96KN9 370 aaPredicted RBP21.04■□□□□ 0.96
MEIS3-208ENST00000560253 CCDC9Q9Y3X0 531 aaKnown RBP21.04■□□□□ 0.96
MEIS3-208ENST00000560253 SBNO2Q9Y2G9 1366 aa21.04■□□□□ 0.96
MEIS3-208ENST00000560253 ATRNO75882 1429 aa21.03■□□□□ 0.96
MEIS3-208ENST00000560253 TOPAZ1Q8N9V7 1692 aa21.02■□□□□ 0.96
MEIS3-208ENST00000560253 BCL9LQ86UU0 1499 aa21.02■□□□□ 0.96
MEIS3-208ENST00000560253 FAM83GA6ND36 823 aa21.02■□□□□ 0.96
MEIS3-208ENST00000560253 ALS2Q96Q42 1657 aa21.02■□□□□ 0.95
MEIS3-208ENST00000560253 SLIT2O94813 1529 aa21.01■□□□□ 0.95
MEIS3-208ENST00000560253 NUTM2GQ5VZR2 741 aa21.01■□□□□ 0.95
MEIS3-208ENST00000560253 PRDM11Q9NQV5 511 aa21.01■□□□□ 0.95
MEIS3-208ENST00000560253 VPS72Q15906 364 aa20.99■□□□□ 0.95
MEIS3-208ENST00000560253 PUS7Q96PZ0 661 aaKnown RBP20.99■□□□□ 0.95
MEIS3-208ENST00000560253 NLRP6P59044 892 aa20.98■□□□□ 0.95
MEIS3-208ENST00000560253 TMC1Q8TDI8 760 aa20.98■□□□□ 0.95
MEIS3-208ENST00000560253 BTG4Q9NY30 223 aa20.98■□□□□ 0.95
MEIS3-208ENST00000560253 EP400Q96L91 3159 aa20.97■□□□□ 0.95
MEIS3-208ENST00000560253 LRP5O75197 1615 aa20.97■□□□□ 0.95
MEIS3-208ENST00000560253 ST20-MTHFSA0A0A6YYL1 179 aa20.97■□□□□ 0.95
MEIS3-208ENST00000560253 ZC3H6P61129 1189 aaKnown RBP20.97■□□□□ 0.95
MEIS3-208ENST00000560253 CCDC125Q86Z20 511 aa20.97■□□□□ 0.95
MEIS3-208ENST00000560253 USP6P35125 1406 aa20.96■□□□□ 0.95
MEIS3-208ENST00000560253 HDGFL2Q7Z4V5 671 aaPredicted RBP20.96■□□□□ 0.95
MEIS3-208ENST00000560253 ABCA3Q99758 1704 aa20.95■□□□□ 0.94
MEIS3-208ENST00000560253 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.95■□□□□ 0.94
MEIS3-208ENST00000560253 EVA1CP58658 441 aa20.94■□□□□ 0.94
MEIS3-208ENST00000560253 TERF2IPQ9NYB0 399 aa20.94■□□□□ 0.94
MEIS3-208ENST00000560253 NWD2Q9ULI1 1742 aa20.94■□□□□ 0.94
MEIS3-208ENST00000560253 TTC21AQ8NDW8 1320 aa20.94■□□□□ 0.94
MEIS3-208ENST00000560253 KTN1Q86UP2 1357 aaKnown RBP20.94■□□□□ 0.94
MEIS3-208ENST00000560253 GCP02774 474 aa20.93■□□□□ 0.94
MEIS3-208ENST00000560253 KIAA0232Q92628 1395 aa20.93■□□□□ 0.94
MEIS3-208ENST00000560253 COL14A1Q05707 1796 aaKnown RBP20.92■□□□□ 0.94
MEIS3-208ENST00000560253 TMF1P82094 1093 aa20.92■□□□□ 0.94
MEIS3-208ENST00000560253 A0A0G2JS52 829 aa20.91■□□□□ 0.94
MEIS3-208ENST00000560253 USP19O94966 1318 aa20.91■□□□□ 0.94
MEIS3-208ENST00000560253 MYT1Q01538 1121 aa20.91■□□□□ 0.94
MEIS3-208ENST00000560253 CDCA8Q53HL2 280 aa20.91■□□□□ 0.94
MEIS3-208ENST00000560253 TTC21BQ7Z4L5 1316 aa20.91■□□□□ 0.94
MEIS3-208ENST00000560253 CHRNA2Q15822 529 aa20.9■□□□□ 0.94
MEIS3-208ENST00000560253 KCNH5Q8NCM2 988 aa20.9■□□□□ 0.94
MEIS3-208ENST00000560253 PLCH1Q4KWH8 1693 aa20.89■□□□□ 0.94
MEIS3-208ENST00000560253 USP47Q96K76 1375 aa20.89■□□□□ 0.93
MEIS3-208ENST00000560253 SEPT12Q8IYM1 358 aa20.88■□□□□ 0.93
MEIS3-208ENST00000560253 TESK2Q96S53 571 aa20.88■□□□□ 0.93
MEIS3-208ENST00000560253 STRN4Q9NRL3 753 aa20.88■□□□□ 0.93
MEIS3-208ENST00000560253 CPSF1Q10570 1443 aaKnown RBP20.87■□□□□ 0.93
MEIS3-208ENST00000560253 CPDO75976 1380 aa20.87■□□□□ 0.93
MEIS3-208ENST00000560253 NINLQ9Y2I6 1382 aa20.87■□□□□ 0.93
MEIS3-208ENST00000560253 ZBTB7CA1YPR0 619 aa20.87■□□□□ 0.93
MEIS3-208ENST00000560253 SLC12A5Q9H2X9 1139 aa20.87■□□□□ 0.93
MEIS3-208ENST00000560253 ONECUT3O60422 494 aaPredicted RBP20.86■□□□□ 0.93
MEIS3-208ENST00000560253 SSH2Q76I76 1423 aa20.86■□□□□ 0.93
MEIS3-208ENST00000560253 PHRF1Q9P1Y6 1649 aaKnown RBP20.86■□□□□ 0.93
MEIS3-208ENST00000560253 CRYBG1Q9Y4K1 1723 aa20.85■□□□□ 0.93
MEIS3-208ENST00000560253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.85■□□□□ 0.93
MEIS3-208ENST00000560253 SPATA31A5Q5VU36 1347 aa20.84■□□□□ 0.93
MEIS3-208ENST00000560253 SPATA31A7Q8IWB4 1347 aa20.84■□□□□ 0.93
MEIS3-208ENST00000560253 FAM98CQ17RN3 349 aaKnown RBP20.84■□□□□ 0.93
MEIS3-208ENST00000560253 GLI3P10071 1580 aa20.83■□□□□ 0.92
MEIS3-208ENST00000560253 AKAP12Q02952 1782 aa20.82■□□□□ 0.92
MEIS3-208ENST00000560253 BLMP54132 1417 aaPredicted RBP20.81■□□□□ 0.92
MEIS3-208ENST00000560253 KRT27Q7Z3Y8 459 aa20.81■□□□□ 0.92
MEIS3-208ENST00000560253 DEFB132Q7Z7B7 95 aa20.81■□□□□ 0.92
MEIS3-208ENST00000560253 SOX12O15370 315 aa20.8■□□□□ 0.92
MEIS3-208ENST00000560253 SF3B2Q13435 895 aaKnown RBP20.8■□□□□ 0.92
MEIS3-208ENST00000560253 NRKQ7Z2Y5 1582 aa20.8■□□□□ 0.92
MEIS3-208ENST00000560253 SPATA31A1Q5TZJ5 1347 aa20.79■□□□□ 0.92
MEIS3-208ENST00000560253 EDC4Q6P2E9 1401 aaKnown RBP20.79■□□□□ 0.92
MEIS3-208ENST00000560253 AATKQ6ZMQ8 1374 aa20.79■□□□□ 0.92
MEIS3-208ENST00000560253 NRAPQ86VF7 1730 aa20.78■□□□□ 0.92
MEIS3-208ENST00000560253 EIF4G2P78344 907 aaKnown RBP eCLIP20.78■□□□□ 0.92
MEIS3-208ENST00000560253 USP35Q9P2H5 1018 aa20.78■□□□□ 0.92
MEIS3-208ENST00000560253 THRAP3Q9Y2W1 955 aaKnown RBP20.78■□□□□ 0.92
MEIS3-208ENST00000560253 SLIT3O75094 1523 aa20.78■□□□□ 0.92
MEIS3-208ENST00000560253 A0A1W2PP64 1363 aa20.76■□□□□ 0.91
MEIS3-208ENST00000560253 USP31Q70CQ4 1352 aa20.76■□□□□ 0.91
MEIS3-208ENST00000560253 LARP1Q6PKG0 1096 aaKnown RBP20.76■□□□□ 0.91
MEIS3-208ENST00000560253 ARHGEF25Q86VW2 580 aa20.76■□□□□ 0.91
MEIS3-208ENST00000560253 NME9Q86XW9 330 aa20.76■□□□□ 0.91
MEIS3-208ENST00000560253 TCP11L2Q8N4U5 519 aa20.76■□□□□ 0.91
MEIS3-208ENST00000560253 PIK3C2AO00443 1686 aa20.76■□□□□ 0.91
MEIS3-208ENST00000560253 MON2Q7Z3U7 1717 aa20.75■□□□□ 0.91
MEIS3-208ENST00000560253 BARGINQ6ZT62 677 aa20.75■□□□□ 0.91
MEIS3-208ENST00000560253 CD163L1Q9NR16 1453 aa20.75■□□□□ 0.91
MEIS3-208ENST00000560253 CAMTA1Q9Y6Y1 1673 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms