RNA–Protein interactions for RNA: ENST00000560067.1

USP3-AS1-205, USP3 antisense RNA 1, humanhuman

TSL 3

Gene USP3-AS1, Length 366 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-205ENST00000560067 ST20-MTHFSA0A0A6YYL1 179 aa17.46■□□□□ 0.39
USP3-AS1-205ENST00000560067 SLC24A1O60721 1099 aa17.46■□□□□ 0.39
USP3-AS1-205ENST00000560067 TRPC5Q9UL62 973 aaPredicted RBP17.46■□□□□ 0.39
USP3-AS1-205ENST00000560067 ITSN1Q15811 1721 aa17.46■□□□□ 0.39
USP3-AS1-205ENST00000560067 RBM6P78332 1123 aaKnown RBP17.45■□□□□ 0.38
USP3-AS1-205ENST00000560067 ABTB2Q8N961 1025 aa17.45■□□□□ 0.38
USP3-AS1-205ENST00000560067 NUTM2GQ5VZR2 741 aa17.44■□□□□ 0.38
USP3-AS1-205ENST00000560067 ZNF692Q9BU19 519 aaPredicted RBP17.44■□□□□ 0.38
USP3-AS1-205ENST00000560067 TOPAZ1Q8N9V7 1692 aa17.42■□□□□ 0.38
USP3-AS1-205ENST00000560067 BRD4O60885 1362 aaPredicted RBP17.42■□□□□ 0.38
USP3-AS1-205ENST00000560067 TRPM3Q9HCF6 1732 aaPredicted RBP17.42■□□□□ 0.38
USP3-AS1-205ENST00000560067 FAM83GA6ND36 823 aa17.42■□□□□ 0.38
USP3-AS1-205ENST00000560067 UNC5CLQ8IV45 518 aa17.42■□□□□ 0.38
USP3-AS1-205ENST00000560067 TESK2Q96S53 571 aa17.42■□□□□ 0.38
USP3-AS1-205ENST00000560067 USP47Q96K76 1375 aa17.41■□□□□ 0.38
USP3-AS1-205ENST00000560067 NLRP13Q86W25 1043 aa17.41■□□□□ 0.38
USP3-AS1-205ENST00000560067 TMC1Q8TDI8 760 aa17.41■□□□□ 0.38
USP3-AS1-205ENST00000560067 PUS7Q96PZ0 661 aaKnown RBP17.41■□□□□ 0.38
USP3-AS1-205ENST00000560067 BCL9LQ86UU0 1499 aa17.4■□□□□ 0.38
USP3-AS1-205ENST00000560067 USP6P35125 1406 aa17.39■□□□□ 0.38
USP3-AS1-205ENST00000560067 ALS2Q96Q42 1657 aa17.39■□□□□ 0.37
USP3-AS1-205ENST00000560067 ATRNO75882 1429 aa17.38■□□□□ 0.37
USP3-AS1-205ENST00000560067 SLIT2O94813 1529 aa17.38■□□□□ 0.37
USP3-AS1-205ENST00000560067 PRDM11Q9NQV5 511 aa17.38■□□□□ 0.37
USP3-AS1-205ENST00000560067 NLRP6P59044 892 aa17.37■□□□□ 0.37
USP3-AS1-205ENST00000560067 TMF1P82094 1093 aa17.37■□□□□ 0.37
USP3-AS1-205ENST00000560067 HDGFL2Q7Z4V5 671 aaPredicted RBP17.37■□□□□ 0.37
USP3-AS1-205ENST00000560067 GJD4Q96KN9 370 aaPredicted RBP17.37■□□□□ 0.37
USP3-AS1-205ENST00000560067 SLC12A5Q9H2X9 1139 aa17.37■□□□□ 0.37
USP3-AS1-205ENST00000560067 CDK12Q9NYV4 1490 aaPredicted RBP17.37■□□□□ 0.37
USP3-AS1-205ENST00000560067 ZC3H6P61129 1189 aaKnown RBP17.36■□□□□ 0.37
USP3-AS1-205ENST00000560067 BTG4Q9NY30 223 aa17.36■□□□□ 0.37
USP3-AS1-205ENST00000560067 CCDC9Q9Y3X0 531 aaKnown RBP17.36■□□□□ 0.37
USP3-AS1-205ENST00000560067 TTC21BQ7Z4L5 1316 aa17.36■□□□□ 0.37
USP3-AS1-205ENST00000560067 KTN1Q86UP2 1357 aaKnown RBP17.36■□□□□ 0.37
USP3-AS1-205ENST00000560067 TERF2IPQ9NYB0 399 aa17.35■□□□□ 0.37
USP3-AS1-205ENST00000560067 CPSF1Q10570 1443 aaKnown RBP17.35■□□□□ 0.37
USP3-AS1-205ENST00000560067 USP19O94966 1318 aa17.34■□□□□ 0.37
USP3-AS1-205ENST00000560067 GCP02774 474 aa17.34■□□□□ 0.37
USP3-AS1-205ENST00000560067 VPS72Q15906 364 aa17.34■□□□□ 0.37
USP3-AS1-205ENST00000560067 CDCA8Q53HL2 280 aa17.34■□□□□ 0.37
USP3-AS1-205ENST00000560067 SSH2Q76I76 1423 aa17.34■□□□□ 0.37
USP3-AS1-205ENST00000560067 TTC21AQ8NDW8 1320 aa17.34■□□□□ 0.37
USP3-AS1-205ENST00000560067 KIAA0232Q92628 1395 aa17.34■□□□□ 0.37
USP3-AS1-205ENST00000560067 CHRNA2Q15822 529 aa17.33■□□□□ 0.36
USP3-AS1-205ENST00000560067 MARF1Q9Y4F3 1742 aaKnown RBP17.33■□□□□ 0.36
USP3-AS1-205ENST00000560067 RGS12O14924 1447 aa17.32■□□□□ 0.36
USP3-AS1-205ENST00000560067 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.32■□□□□ 0.36
USP3-AS1-205ENST00000560067 NINLQ9Y2I6 1382 aa17.31■□□□□ 0.36
USP3-AS1-205ENST00000560067 ABCA3Q99758 1704 aa17.3■□□□□ 0.36
USP3-AS1-205ENST00000560067 EVA1CP58658 441 aa17.29■□□□□ 0.36
USP3-AS1-205ENST00000560067 EIF4G2P78344 907 aaKnown RBP eCLIP17.29■□□□□ 0.36
USP3-AS1-205ENST00000560067 CPDO75976 1380 aa17.28■□□□□ 0.36
USP3-AS1-205ENST00000560067 ZBTB7CA1YPR0 619 aa17.28■□□□□ 0.36
USP3-AS1-205ENST00000560067 KCNH5Q8NCM2 988 aa17.28■□□□□ 0.36
USP3-AS1-205ENST00000560067 STRN4Q9NRL3 753 aa17.28■□□□□ 0.36
USP3-AS1-205ENST00000560067 A0A1W2PP64 1363 aa17.28■□□□□ 0.36
USP3-AS1-205ENST00000560067 CD163L1Q9NR16 1453 aa17.27■□□□□ 0.36
USP3-AS1-205ENST00000560067 COL14A1Q05707 1796 aaKnown RBP17.26■□□□□ 0.35
USP3-AS1-205ENST00000560067 SOX12O15370 315 aa17.26■□□□□ 0.35
USP3-AS1-205ENST00000560067 NME9Q86XW9 330 aa17.26■□□□□ 0.35
USP3-AS1-205ENST00000560067 EDC4Q6P2E9 1401 aaKnown RBP17.26■□□□□ 0.35
USP3-AS1-205ENST00000560067 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.25■□□□□ 0.35
USP3-AS1-205ENST00000560067 CRYBG1Q9Y4K1 1723 aa17.25■□□□□ 0.35
USP3-AS1-205ENST00000560067 A0A0G2JS52 829 aa17.25■□□□□ 0.35
USP3-AS1-205ENST00000560067 HSPA5P11021 654 aaKnown RBP17.25■□□□□ 0.35
USP3-AS1-205ENST00000560067 MYT1Q01538 1121 aa17.25■□□□□ 0.35
USP3-AS1-205ENST00000560067 SEPT12Q8IYM1 358 aa17.25■□□□□ 0.35
USP3-AS1-205ENST00000560067 ZRANB1Q9UGI0 708 aa17.25■□□□□ 0.35
USP3-AS1-205ENST00000560067 NWD2Q9ULI1 1742 aa17.24■□□□□ 0.35
USP3-AS1-205ENST00000560067 SPATA31A5Q5VU36 1347 aa17.24■□□□□ 0.35
USP3-AS1-205ENST00000560067 SPATA31A7Q8IWB4 1347 aa17.24■□□□□ 0.35
USP3-AS1-205ENST00000560067 PLCH1Q4KWH8 1693 aa17.24■□□□□ 0.35
USP3-AS1-205ENST00000560067 ONECUT3O60422 494 aaPredicted RBP17.24■□□□□ 0.35
USP3-AS1-205ENST00000560067 UPF1Q92900 1129 aaKnown RBP eCLIP17.24■□□□□ 0.35
USP3-AS1-205ENST00000560067 PHRF1Q9P1Y6 1649 aaKnown RBP17.24■□□□□ 0.35
USP3-AS1-205ENST00000560067 NRKQ7Z2Y5 1582 aa17.23■□□□□ 0.35
USP3-AS1-205ENST00000560067 FAM98CQ17RN3 349 aaKnown RBP17.23■□□□□ 0.35
USP3-AS1-205ENST00000560067 USP31Q70CQ4 1352 aa17.23■□□□□ 0.35
USP3-AS1-205ENST00000560067 ANKRD36BQ8N2N9 1353 aa17.23■□□□□ 0.35
USP3-AS1-205ENST00000560067 AKAP12Q02952 1782 aa17.23■□□□□ 0.35
USP3-AS1-205ENST00000560067 SLIT3O75094 1523 aa17.22■□□□□ 0.35
USP3-AS1-205ENST00000560067 ARHGEF25Q86VW2 580 aa17.22■□□□□ 0.35
USP3-AS1-205ENST00000560067 POLR3GLQ9BT43 218 aa17.22■□□□□ 0.35
USP3-AS1-205ENST00000560067 AATKQ6ZMQ8 1374 aa17.22■□□□□ 0.35
USP3-AS1-205ENST00000560067 GLI3P10071 1580 aa17.22■□□□□ 0.35
USP3-AS1-205ENST00000560067 PIK3C2AO00443 1686 aa17.22■□□□□ 0.35
USP3-AS1-205ENST00000560067 SPATA31A1Q5TZJ5 1347 aa17.21■□□□□ 0.34
USP3-AS1-205ENST00000560067 LARP1Q6PKG0 1096 aaKnown RBP17.2■□□□□ 0.34
USP3-AS1-205ENST00000560067 USP35Q9P2H5 1018 aa17.2■□□□□ 0.34
USP3-AS1-205ENST00000560067 COG3Q96JB2 828 aa17.19■□□□□ 0.34
USP3-AS1-205ENST00000560067 CAMTA1Q9Y6Y1 1673 aa17.19■□□□□ 0.34
USP3-AS1-205ENST00000560067 MON2Q7Z3U7 1717 aa17.18■□□□□ 0.34
USP3-AS1-205ENST00000560067 KRT27Q7Z3Y8 459 aa17.18■□□□□ 0.34
USP3-AS1-205ENST00000560067 NRAPQ86VF7 1730 aa17.18■□□□□ 0.34
USP3-AS1-205ENST00000560067 TCP11L2Q8N4U5 519 aa17.17■□□□□ 0.34
USP3-AS1-205ENST00000560067 AXIN2Q9Y2T1 843 aa17.17■□□□□ 0.34
USP3-AS1-205ENST00000560067 CSB-PGBD3P0DP91 1061 aa17.16■□□□□ 0.34
USP3-AS1-205ENST00000560067 BARGINQ6ZT62 677 aa17.16■□□□□ 0.34
USP3-AS1-205ENST00000560067 FYB1O15117 783 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms