RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 LMTK3Q96Q04 1460 aa31.25■■■□□ 2.59
TM2D3-209ENST00000560013 SALL2Q9Y467 1007 aaPredicted RBP31.25■■■□□ 2.59
TM2D3-209ENST00000560013 COG3Q96JB2 828 aa31.25■■■□□ 2.59
TM2D3-209ENST00000560013 MAP2P11137 1827 aaKnown RBP31.25■■■□□ 2.59
TM2D3-209ENST00000560013 SMG6Q86US8 1419 aaKnown RBP31.24■■■□□ 2.59
TM2D3-209ENST00000560013 NGDNQ8NEJ9 315 aaKnown RBP31.24■■■□□ 2.59
TM2D3-209ENST00000560013 ZRANB1Q9UGI0 708 aa31.23■■■□□ 2.59
TM2D3-209ENST00000560013 SSH2Q76I76 1423 aa31.22■■■□□ 2.59
TM2D3-209ENST00000560013 PROSER2Q86WR7 435 aaPredicted RBP31.21■■■□□ 2.59
TM2D3-209ENST00000560013 PDE3BQ13370 1112 aa31.21■■■□□ 2.59
TM2D3-209ENST00000560013 C14orf37Q86TY3 774 aa31.21■■■□□ 2.59
TM2D3-209ENST00000560013 NUDCQ9Y266 331 aa31.21■■■□□ 2.59
TM2D3-209ENST00000560013 CCDC146Q8IYE0 955 aa31.2■■■□□ 2.58
TM2D3-209ENST00000560013 AATKQ6ZMQ8 1374 aa31.19■■■□□ 2.58
TM2D3-209ENST00000560013 TTC21AQ8NDW8 1320 aa31.19■■■□□ 2.58
TM2D3-209ENST00000560013 COL3A1P02461 1466 aaPredicted RBP31.18■■■□□ 2.58
TM2D3-209ENST00000560013 PNPLA6Q8IY17 1366 aa31.18■■■□□ 2.58
TM2D3-209ENST00000560013 POLKQ9UBT6 870 aa31.18■■■□□ 2.58
TM2D3-209ENST00000560013 STRCQ7RTU9 1775 aa31.16■■■□□ 2.58
TM2D3-209ENST00000560013 SUPT16HQ9Y5B9 1047 aaKnown RBP31.16■■■□□ 2.58
TM2D3-209ENST00000560013 STRCP1A6NGW2 1772 aa31.15■■■□□ 2.58
TM2D3-209ENST00000560013 FBLN1P23142 703 aa31.15■■■□□ 2.58
TM2D3-209ENST00000560013 OVOS2A0A0J9YW53 1432 aa31.13■■■□□ 2.57
TM2D3-209ENST00000560013 OVOS2Q6IE36 1432 aa31.13■■■□□ 2.57
TM2D3-209ENST00000560013 PHF8Q9UPP1 1060 aa31.13■■■□□ 2.57
TM2D3-209ENST00000560013 APAF1O14727 1248 aa31.12■■■□□ 2.57
TM2D3-209ENST00000560013 DIAPH1O60610 1272 aaKnown RBP31.11■■■□□ 2.57
TM2D3-209ENST00000560013 NGEFQ8N5V2 710 aa31.11■■■□□ 2.57
TM2D3-209ENST00000560013 NEFLP07196 543 aa31.1■■■□□ 2.57
TM2D3-209ENST00000560013 U2AF1L5P0DN76 240 aaPredicted RBP31.1■■■□□ 2.57
TM2D3-209ENST00000560013 U2AF1Q01081 240 aaKnown RBP eCLIP31.1■■■□□ 2.57
TM2D3-209ENST00000560013 RUNDC1Q96C34 613 aa31.1■■■□□ 2.57
TM2D3-209ENST00000560013 PPM1GO15355 546 aaPredicted RBP31.1■■■□□ 2.57
TM2D3-209ENST00000560013 C19orf44Q9H6X5 657 aa31.09■■■□□ 2.57
TM2D3-209ENST00000560013 EMILIN1Q9Y6C2 1016 aa31.08■■■□□ 2.57
TM2D3-209ENST00000560013 ESCO1Q5FWF5 840 aa31.07■■■□□ 2.56
TM2D3-209ENST00000560013 NCOA3Q9Y6Q9 1424 aa31.07■■■□□ 2.56
TM2D3-209ENST00000560013 CDK12Q9NYV4 1490 aaPredicted RBP31.07■■■□□ 2.56
TM2D3-209ENST00000560013 ZNF521Q96K83 1311 aa31.06■■■□□ 2.56
TM2D3-209ENST00000560013 USP31Q70CQ4 1352 aa31.06■■■□□ 2.56
TM2D3-209ENST00000560013 PIK3C2AO00443 1686 aa31.06■■■□□ 2.56
TM2D3-209ENST00000560013 U2SURPO15042 1029 aaKnown RBP31.06■■■□□ 2.56
TM2D3-209ENST00000560013 CDCA7LQ96GN5 454 aa31.06■■■□□ 2.56
TM2D3-209ENST00000560013 FKBP8Q14318 412 aa31.05■■■□□ 2.56
TM2D3-209ENST00000560013 RRS1Q15050 365 aaKnown RBP31.04■■■□□ 2.56
TM2D3-209ENST00000560013 TMEM94Q12767 1356 aa31.04■■■□□ 2.56
TM2D3-209ENST00000560013 IQSEC2Q5JU85 1478 aa31.01■■■□□ 2.55
TM2D3-209ENST00000560013 TCP11L2Q8N4U5 519 aa31■■■□□ 2.55
TM2D3-209ENST00000560013 USP54Q70EL1 1684 aa30.99■■■□□ 2.55
TM2D3-209ENST00000560013 GOLGA2Q08379 1002 aa30.99■■■□□ 2.55
TM2D3-209ENST00000560013 DCCP43146 1447 aa30.98■■■□□ 2.55
TM2D3-209ENST00000560013 PSME1Q06323 249 aa30.98■■■□□ 2.55
TM2D3-209ENST00000560013 ORAI2Q96SN7 254 aa30.98■■■□□ 2.55
TM2D3-209ENST00000560013 PAK3O75914 559 aaPredicted RBP30.97■■■□□ 2.55
TM2D3-209ENST00000560013 NLRP6P59044 892 aa30.97■■■□□ 2.55
TM2D3-209ENST00000560013 PNNQ9H307 717 aaKnown RBP30.97■■■□□ 2.55
TM2D3-209ENST00000560013 C1orf167Q5SNV9 1468 aa30.97■■■□□ 2.55
TM2D3-209ENST00000560013 ATF3P18847 181 aa30.96■■■□□ 2.55
TM2D3-209ENST00000560013 ABTB2Q8N961 1025 aa30.96■■■□□ 2.55
TM2D3-209ENST00000560013 PLEKHF1Q96S99 279 aa30.96■■■□□ 2.55
TM2D3-209ENST00000560013 MARF1Q9Y4F3 1742 aaKnown RBP30.96■■■□□ 2.55
TM2D3-209ENST00000560013 IL13P35225 146 aa30.95■■■□□ 2.55
TM2D3-209ENST00000560013 NCBP3Q53F19 620 aaKnown RBP30.95■■■□□ 2.54
TM2D3-209ENST00000560013 KIF1AQ12756 1690 aa30.94■■■□□ 2.54
TM2D3-209ENST00000560013 FCHSD2O94868 740 aa30.93■■■□□ 2.54
TM2D3-209ENST00000560013 LRRC7Q96NW7 1537 aa30.92■■■□□ 2.54
TM2D3-209ENST00000560013 WWC1Q8IX03 1113 aa30.92■■■□□ 2.54
TM2D3-209ENST00000560013 XIRP1Q702N8 1843 aaKnown RBP30.92■■■□□ 2.54
TM2D3-209ENST00000560013 NEUROD2Q15784 382 aa30.91■■■□□ 2.54
TM2D3-209ENST00000560013 PEAK1Q9H792 1746 aa30.91■■■□□ 2.54
TM2D3-209ENST00000560013 MST1RQ04912 1400 aa30.91■■■□□ 2.54
TM2D3-209ENST00000560013 SOX12O15370 315 aa30.91■■■□□ 2.54
TM2D3-209ENST00000560013 RRP7AQ9Y3A4 280 aaKnown RBP30.91■■■□□ 2.54
TM2D3-209ENST00000560013 FOXO3O43524 673 aa30.9■■■□□ 2.54
TM2D3-209ENST00000560013 SLFN5Q08AF3 891 aa30.9■■■□□ 2.54
TM2D3-209ENST00000560013 MAPK8IP3Q9UPT6 1336 aa30.9■■■□□ 2.54
TM2D3-209ENST00000560013 CCDC27Q2M243 656 aa30.89■■■□□ 2.54
TM2D3-209ENST00000560013 DUSP27Q5VZP5 1158 aa30.89■■■□□ 2.54
TM2D3-209ENST00000560013 NUTM2GQ5VZR2 741 aa30.89■■■□□ 2.54
TM2D3-209ENST00000560013 CADPS2Q86UW7 1296 aa30.89■■■□□ 2.54
TM2D3-209ENST00000560013 PHF23Q9BUL5 403 aaPredicted RBP30.89■■■□□ 2.54
TM2D3-209ENST00000560013 RNF123Q5XPI4 1314 aa30.88■■■□□ 2.53
TM2D3-209ENST00000560013 MSH6P52701 1360 aa30.88■■■□□ 2.53
TM2D3-209ENST00000560013 TRMT2AQ8IZ69 625 aaKnown RBP30.87■■■□□ 2.53
TM2D3-209ENST00000560013 RSPH6AQ9H0K4 717 aa30.87■■■□□ 2.53
TM2D3-209ENST00000560013 RCAN3Q9UKA8 241 aa30.87■■■□□ 2.53
TM2D3-209ENST00000560013 MAP3K19Q56UN5 1328 aa30.87■■■□□ 2.53
TM2D3-209ENST00000560013 ZNF335Q9H4Z2 1342 aaPredicted RBP30.85■■■□□ 2.53
TM2D3-209ENST00000560013 E9PSI1 815 aa30.85■■■□□ 2.53
TM2D3-209ENST00000560013 SBNO1A3KN83 1393 aa30.85■■■□□ 2.53
TM2D3-209ENST00000560013 TMPOP42166 694 aaKnown RBP30.84■■■□□ 2.53
TM2D3-209ENST00000560013 IRX6P78412 446 aaPredicted RBP30.84■■■□□ 2.53
TM2D3-209ENST00000560013 EIF4A2Q14240 407 aaKnown RBP30.84■■■□□ 2.53
TM2D3-209ENST00000560013 HSP90AB2PQ58FF8 381 aa30.83■■■□□ 2.53
TM2D3-209ENST00000560013 SPINK5Q9NQ38 1064 aaPredicted RBP30.83■■■□□ 2.53
TM2D3-209ENST00000560013 FLT4P35916 1363 aa30.83■■■□□ 2.53
TM2D3-209ENST00000560013 NEFMP07197 916 aa30.82■■■□□ 2.53
TM2D3-209ENST00000560013 HMOX1P09601 288 aa30.82■■■□□ 2.53
TM2D3-209ENST00000560013 PRKAR2BP31323 418 aa30.82■■■□□ 2.53
TM2D3-209ENST00000560013 WDR63Q8IWG1 891 aa30.82■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms