RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 POLR3AO14802 1390 aaPredicted RBP29.38■■■□□ 2.29
CHRNA3-207ENST00000559941 GLI3P10071 1580 aa29.37■■■□□ 2.29
CHRNA3-207ENST00000559941 RALGAPBQ86X10 1494 aa29.36■■■□□ 2.29
CHRNA3-207ENST00000559941 ACEP12821 1306 aa29.36■■■□□ 2.29
CHRNA3-207ENST00000559941 FAM83GA6ND36 823 aa29.35■■■□□ 2.29
CHRNA3-207ENST00000559941 TRIM26Q12899 539 aaPredicted RBP29.35■■■□□ 2.29
CHRNA3-207ENST00000559941 SRPK2P78362 688 aaKnown RBP29.34■■■□□ 2.29
CHRNA3-207ENST00000559941 NBPF8Q3BBV2 869 aa29.34■■■□□ 2.29
CHRNA3-207ENST00000559941 ATAD2Q6PL18 1390 aa29.34■■■□□ 2.29
CHRNA3-207ENST00000559941 VPS72Q15906 364 aa29.33■■■□□ 2.29
CHRNA3-207ENST00000559941 COL14A1Q05707 1796 aaKnown RBP29.32■■■□□ 2.28
CHRNA3-207ENST00000559941 ROCK2O75116 1388 aaKnown RBP29.32■■■□□ 2.28
CHRNA3-207ENST00000559941 CABP2Q9NPB3 220 aa29.31■■■□□ 2.28
CHRNA3-207ENST00000559941 NRAPQ86VF7 1730 aa29.3■■■□□ 2.28
CHRNA3-207ENST00000559941 PPIP5K1Q6PFW1 1433 aa29.29■■■□□ 2.28
CHRNA3-207ENST00000559941 PHRF1Q9P1Y6 1649 aaKnown RBP29.27■■■□□ 2.28
CHRNA3-207ENST00000559941 BTG4Q9NY30 223 aa29.26■■■□□ 2.27
CHRNA3-207ENST00000559941 BRWD3Q6RI45 1802 aa29.26■■■□□ 2.27
CHRNA3-207ENST00000559941 CCDC9Q9Y3X0 531 aaKnown RBP29.24■■■□□ 2.27
CHRNA3-207ENST00000559941 EVC2Q86UK5 1308 aa29.23■■■□□ 2.27
CHRNA3-207ENST00000559941 ONECUT3O60422 494 aaPredicted RBP29.23■■■□□ 2.27
CHRNA3-207ENST00000559941 NUTM2GQ5VZR2 741 aa29.22■■■□□ 2.27
CHRNA3-207ENST00000559941 TONSLQ96HA7 1378 aa29.22■■■□□ 2.27
CHRNA3-207ENST00000559941 PRDM11Q9NQV5 511 aa29.21■■■□□ 2.27
CHRNA3-207ENST00000559941 CABP1Q9NZU7 370 aa29.21■■■□□ 2.27
CHRNA3-207ENST00000559941 BRD4O60885 1362 aaPredicted RBP29.21■■■□□ 2.27
CHRNA3-207ENST00000559941 SEPT12Q8IYM1 358 aa29.2■■■□□ 2.26
CHRNA3-207ENST00000559941 ABTB2Q8N961 1025 aa29.2■■■□□ 2.26
CHRNA3-207ENST00000559941 EP400Q96L91 3159 aa29.19■■■□□ 2.26
CHRNA3-207ENST00000559941 KIAA0232Q92628 1395 aa29.19■■■□□ 2.26
CHRNA3-207ENST00000559941 NRKQ7Z2Y5 1582 aa29.15■■■□□ 2.26
CHRNA3-207ENST00000559941 USP6P35125 1406 aa29.15■■■□□ 2.26
CHRNA3-207ENST00000559941 ZC3H6P61129 1189 aaKnown RBP29.15■■■□□ 2.26
CHRNA3-207ENST00000559941 CCDC125Q86Z20 511 aa29.15■■■□□ 2.26
CHRNA3-207ENST00000559941 CARD11Q9BXL7 1154 aa29.15■■■□□ 2.26
CHRNA3-207ENST00000559941 USP19O94966 1318 aa29.15■■■□□ 2.26
CHRNA3-207ENST00000559941 NLRP13Q86W25 1043 aa29.14■■■□□ 2.26
CHRNA3-207ENST00000559941 CHRNA2Q15822 529 aa29.13■■■□□ 2.25
CHRNA3-207ENST00000559941 SPATA31A5Q5VU36 1347 aa29.13■■■□□ 2.25
CHRNA3-207ENST00000559941 SPATA31A7Q8IWB4 1347 aa29.13■■■□□ 2.25
CHRNA3-207ENST00000559941 SBNO2Q9Y2G9 1366 aa29.13■■■□□ 2.25
CHRNA3-207ENST00000559941 FAM98CQ17RN3 349 aaKnown RBP29.11■■■□□ 2.25
CHRNA3-207ENST00000559941 AKAP12Q02952 1782 aa29.11■■■□□ 2.25
CHRNA3-207ENST00000559941 CPDO75976 1380 aa29.1■■■□□ 2.25
CHRNA3-207ENST00000559941 SSH2Q76I76 1423 aa29.1■■■□□ 2.25
CHRNA3-207ENST00000559941 GCP02774 474 aa29.08■■■□□ 2.25
CHRNA3-207ENST00000559941 KRT27Q7Z3Y8 459 aa29.08■■■□□ 2.25
CHRNA3-207ENST00000559941 ZNF692Q9BU19 519 aaPredicted RBP29.08■■■□□ 2.25
CHRNA3-207ENST00000559941 A0A0G2JS52 829 aa29.06■■■□□ 2.24
CHRNA3-207ENST00000559941 MYT1Q01538 1121 aa29.06■■■□□ 2.24
CHRNA3-207ENST00000559941 LMO7Q8WWI1 1683 aa29.05■■■□□ 2.24
CHRNA3-207ENST00000559941 NLRP6P59044 892 aa29.05■■■□□ 2.24
CHRNA3-207ENST00000559941 STRN4Q9NRL3 753 aa29.05■■■□□ 2.24
CHRNA3-207ENST00000559941 PIK3C2AO00443 1686 aa29.05■■■□□ 2.24
CHRNA3-207ENST00000559941 BLMP54132 1417 aaPredicted RBP29.04■■■□□ 2.24
CHRNA3-207ENST00000559941 SPATA31A1Q5TZJ5 1347 aa29.04■■■□□ 2.24
CHRNA3-207ENST00000559941 THSD7AQ9UPZ6 1657 aa29.04■■■□□ 2.24
CHRNA3-207ENST00000559941 CAMTA1Q9Y6Y1 1673 aa29.04■■■□□ 2.24
CHRNA3-207ENST00000559941 SLIT3O75094 1523 aa29.03■■■□□ 2.24
CHRNA3-207ENST00000559941 CPSF1Q10570 1443 aaKnown RBP29.03■■■□□ 2.24
CHRNA3-207ENST00000559941 TTC21BQ7Z4L5 1316 aa29.01■■■□□ 2.23
CHRNA3-207ENST00000559941 EVA1CP58658 441 aa29.01■■■□□ 2.23
CHRNA3-207ENST00000559941 MON2Q7Z3U7 1717 aa28.99■■■□□ 2.23
CHRNA3-207ENST00000559941 KTN1Q86UP2 1357 aaKnown RBP28.98■■■□□ 2.23
CHRNA3-207ENST00000559941 TTC21AQ8NDW8 1320 aa28.97■■■□□ 2.23
CHRNA3-207ENST00000559941 SF3B2Q13435 895 aaKnown RBP28.95■■■□□ 2.22
CHRNA3-207ENST00000559941 LARP1Q6PKG0 1096 aaKnown RBP28.95■■■□□ 2.22
CHRNA3-207ENST00000559941 PUS7Q96PZ0 661 aaKnown RBP28.94■■■□□ 2.22
CHRNA3-207ENST00000559941 COL18A1P39060 1754 aa28.93■■■□□ 2.22
CHRNA3-207ENST00000559941 AATKQ6ZMQ8 1374 aa28.93■■■□□ 2.22
CHRNA3-207ENST00000559941 BARGINQ6ZT62 677 aa28.93■■■□□ 2.22
CHRNA3-207ENST00000559941 COL5A2P05997 1499 aaPredicted RBP28.92■■■□□ 2.22
CHRNA3-207ENST00000559941 CD163L1Q9NR16 1453 aa28.92■■■□□ 2.22
CHRNA3-207ENST00000559941 USP35Q9P2H5 1018 aa28.92■■■□□ 2.22
CHRNA3-207ENST00000559941 DEFB132Q7Z7B7 95 aa28.91■■■□□ 2.22
CHRNA3-207ENST00000559941 KCNH5Q8NCM2 988 aa28.91■■■□□ 2.22
CHRNA3-207ENST00000559941 ST20-MTHFSA0A0A6YYL1 179 aa28.9■■■□□ 2.22
CHRNA3-207ENST00000559941 ZBTB7CA1YPR0 619 aa28.9■■■□□ 2.22
CHRNA3-207ENST00000559941 TMC1Q8TDI8 760 aa28.9■■■□□ 2.22
CHRNA3-207ENST00000559941 TCP11L2Q8N4U5 519 aa28.89■■■□□ 2.22
CHRNA3-207ENST00000559941 TESK2Q96S53 571 aa28.89■■■□□ 2.22
CHRNA3-207ENST00000559941 SLC12A5Q9H2X9 1139 aa28.89■■■□□ 2.22
CHRNA3-207ENST00000559941 ZRANB1Q9UGI0 708 aa28.89■■■□□ 2.22
CHRNA3-207ENST00000559941 FAM182BQ5T319 152 aa28.88■■■□□ 2.21
CHRNA3-207ENST00000559941 THRAP3Q9Y2W1 955 aaKnown RBP28.88■■■□□ 2.21
CHRNA3-207ENST00000559941 RGPD1P0DJD0 1748 aa28.88■■■□□ 2.21
CHRNA3-207ENST00000559941 SLC24A1O60721 1099 aa28.87■■■□□ 2.21
CHRNA3-207ENST00000559941 USP54Q70EL1 1684 aa28.86■■■□□ 2.21
CHRNA3-207ENST00000559941 HDGFL2Q7Z4V5 671 aaPredicted RBP28.86■■■□□ 2.21
CHRNA3-207ENST00000559941 ARHGEF25Q86VW2 580 aa28.86■■■□□ 2.21
CHRNA3-207ENST00000559941 USP31Q70CQ4 1352 aa28.86■■■□□ 2.21
CHRNA3-207ENST00000559941 CRB1P82279 1406 aa28.86■■■□□ 2.21
CHRNA3-207ENST00000559941 RGPD5Q99666 1765 aa28.85■■■□□ 2.21
CHRNA3-207ENST00000559941 NFAT5O94916 1531 aa28.84■■■□□ 2.21
CHRNA3-207ENST00000559941 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.84■■■□□ 2.21
CHRNA3-207ENST00000559941 TERF2IPQ9NYB0 399 aa28.83■■■□□ 2.21
CHRNA3-207ENST00000559941 AXIN2Q9Y2T1 843 aa28.83■■■□□ 2.21
CHRNA3-207ENST00000559941 CLSPNQ9HAW4 1339 aa28.83■■■□□ 2.21
CHRNA3-207ENST00000559941 PARP4Q9UKK3 1724 aaKnown RBP28.83■■■□□ 2.21
CHRNA3-207ENST00000559941 SOX12O15370 315 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms