RNA–Protein interactions for RNA: ENST00000559833.5

TRIP4-208, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 636 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-208ENST00000559833 MPHOSPH9Q99550 1183 aa13.14□□□□□ -0.31
TRIP4-208ENST00000559833 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.14□□□□□ -0.31
TRIP4-208ENST00000559833 SPATA31E1Q6ZUB1 1445 aa13.13□□□□□ -0.31
TRIP4-208ENST00000559833 ROBO2Q9HCK4 1378 aa13.13□□□□□ -0.31
TRIP4-208ENST00000559833 TMEM121BQ9BXQ6 578 aaPredicted RBP13.13□□□□□ -0.31
TRIP4-208ENST00000559833 LAMC1P11047 1609 aa13.12□□□□□ -0.31
TRIP4-208ENST00000559833 ACIN1Q9UKV3 1341 aaKnown RBP13.11□□□□□ -0.31
TRIP4-208ENST00000559833 IFT172Q9UG01 1749 aa13.1□□□□□ -0.31
TRIP4-208ENST00000559833 C1orf167Q5SNV9 1468 aa13.1□□□□□ -0.31
TRIP4-208ENST00000559833 LRRC59Q96AG4 307 aaKnown RBP13.1□□□□□ -0.31
TRIP4-208ENST00000559833 ADGRF5Q8IZF2 1346 aa13.1□□□□□ -0.31
TRIP4-208ENST00000559833 CCDC144AA2RUR9 1427 aa13.09□□□□□ -0.31
TRIP4-208ENST00000559833 SNPHO15079 494 aa13.09□□□□□ -0.31
TRIP4-208ENST00000559833 ANKRD30BQ9BXX2 1392 aa13.07□□□□□ -0.32
TRIP4-208ENST00000559833 TECPR2O15040 1411 aa13.07□□□□□ -0.32
TRIP4-208ENST00000559833 GSE1Q14687 1217 aa13.07□□□□□ -0.32
TRIP4-208ENST00000559833 ZNF772Q68DY9 489 aaPredicted RBP13.07□□□□□ -0.32
TRIP4-208ENST00000559833 ZNF467Q7Z7K2 595 aaPredicted RBP13.07□□□□□ -0.32
TRIP4-208ENST00000559833 DDX17Q92841 729 aaKnown RBP13.07□□□□□ -0.32
TRIP4-208ENST00000559833 SOS2Q07890 1332 aaPredicted RBP13.07□□□□□ -0.32
TRIP4-208ENST00000559833 VASPP50552 380 aaPredicted RBP13.06□□□□□ -0.32
TRIP4-208ENST00000559833 ORAI2Q96SN7 254 aa13.06□□□□□ -0.32
TRIP4-208ENST00000559833 PNPLA6Q8IY17 1366 aa13.06□□□□□ -0.32
TRIP4-208ENST00000559833 ABCC11Q96J66 1382 aa13.06□□□□□ -0.32
TRIP4-208ENST00000559833 PIK3C2GO75747 1445 aa13.05□□□□□ -0.32
TRIP4-208ENST00000559833 CHRM1P11229 460 aaPredicted RBP13.05□□□□□ -0.32
TRIP4-208ENST00000559833 RGL3Q3MIN7 710 aa13.05□□□□□ -0.32
TRIP4-208ENST00000559833 MARVELD3Q96A59 401 aa13.05□□□□□ -0.32
TRIP4-208ENST00000559833 SIRT1Q96EB6 747 aa13.04□□□□□ -0.32
TRIP4-208ENST00000559833 LRPPRCP42704 1394 aaKnown RBP13.04□□□□□ -0.32
TRIP4-208ENST00000559833 NRXN1Q9ULB1 1477 aa13.04□□□□□ -0.32
TRIP4-208ENST00000559833 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
TRIP4-208ENST00000559833 SPNS2Q8IVW8 549 aa13.03□□□□□ -0.32
TRIP4-208ENST00000559833 KNDC1Q76NI1 1749 aa13.02□□□□□ -0.32
TRIP4-208ENST00000559833 NUTM2BA6NNL0 878 aaPredicted RBP13.02□□□□□ -0.33
TRIP4-208ENST00000559833 NUTM2EB1AL46 878 aaPredicted RBP13.02□□□□□ -0.33
TRIP4-208ENST00000559833 MEX3CQ5U5Q3 659 aaKnown RBP13.02□□□□□ -0.33
TRIP4-208ENST00000559833 WAPLQ7Z5K2 1190 aa13.02□□□□□ -0.33
TRIP4-208ENST00000559833 NUTM2AQ8IVF1 878 aaPredicted RBP13.02□□□□□ -0.33
TRIP4-208ENST00000559833 KLHL34Q8N239 644 aa13.02□□□□□ -0.33
TRIP4-208ENST00000559833 C14orf93Q9H972 538 aaKnown RBP13.02□□□□□ -0.33
TRIP4-208ENST00000559833 MMRN1Q13201 1228 aa13.01□□□□□ -0.33
TRIP4-208ENST00000559833 TMEM132EQ6IEE7 984 aa13.01□□□□□ -0.33
TRIP4-208ENST00000559833 RAB3GAP2Q9H2M9 1393 aa13.01□□□□□ -0.33
TRIP4-208ENST00000559833 CDK12Q9NYV4 1490 aaPredicted RBP13□□□□□ -0.33
TRIP4-208ENST00000559833 YTHDC2Q9H6S0 1430 aaKnown RBP13□□□□□ -0.33
TRIP4-208ENST00000559833 AFF2P51816 1311 aa13□□□□□ -0.33
TRIP4-208ENST00000559833 HRCP23327 699 aa13□□□□□ -0.33
TRIP4-208ENST00000559833 MKRN3Q13064 507 aaKnown RBP13□□□□□ -0.33
TRIP4-208ENST00000559833 COL22A1Q8NFW1 1626 aaPredicted RBP12.99□□□□□ -0.33
TRIP4-208ENST00000559833 PLEKHH1Q9ULM0 1364 aa12.99□□□□□ -0.33
TRIP4-208ENST00000559833 RXRBP28702 533 aa12.99□□□□□ -0.33
TRIP4-208ENST00000559833 PSEN1P49768 467 aa12.99□□□□□ -0.33
TRIP4-208ENST00000559833 L3MBTL3Q96JM7 780 aaPredicted RBP12.99□□□□□ -0.33
TRIP4-208ENST00000559833 MYOM2P54296 1465 aa12.98□□□□□ -0.33
TRIP4-208ENST00000559833 PXDNQ92626 1479 aa12.98□□□□□ -0.33
TRIP4-208ENST00000559833 C3orf67Q6ZVT6 689 aa12.98□□□□□ -0.33
TRIP4-208ENST00000559833 STK26Q9P289 416 aa12.98□□□□□ -0.33
TRIP4-208ENST00000559833 GOLGA2Q08379 1002 aa12.97□□□□□ -0.33
TRIP4-208ENST00000559833 ESCO1Q5FWF5 840 aa12.97□□□□□ -0.33
TRIP4-208ENST00000559833 FNBP4Q8N3X1 1017 aaPredicted RBP12.97□□□□□ -0.33
TRIP4-208ENST00000559833 QTRT2Q9H974 415 aaKnown RBP12.97□□□□□ -0.33
TRIP4-208ENST00000559833 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.97□□□□□ -0.334e-6■■■■■ 27.4
TRIP4-208ENST00000559833 FMN2Q9NZ56 1722 aa12.96□□□□□ -0.33
TRIP4-208ENST00000559833 NPHP3Q7Z494 1330 aa12.96□□□□□ -0.33
TRIP4-208ENST00000559833 CFAP70Q5T0N1 1121 aa12.96□□□□□ -0.33
TRIP4-208ENST00000559833 UPF1Q92900 1129 aaKnown RBP eCLIP12.96□□□□□ -0.33
TRIP4-208ENST00000559833 C8orf37Q96NL8 207 aa12.96□□□□□ -0.33
TRIP4-208ENST00000559833 FOXO3O43524 673 aa12.95□□□□□ -0.34
TRIP4-208ENST00000559833 DHX57Q6P158 1386 aaKnown RBP12.94□□□□□ -0.34
TRIP4-208ENST00000559833 RBM6P78332 1123 aaKnown RBP12.94□□□□□ -0.34
TRIP4-208ENST00000559833 NGLY1Q96IV0 654 aa12.94□□□□□ -0.34
TRIP4-208ENST00000559833 ADAMTS2O95450 1211 aa12.93□□□□□ -0.34
TRIP4-208ENST00000559833 ADGRB1O14514 1584 aa12.93□□□□□ -0.34
TRIP4-208ENST00000559833 DLC1Q96QB1 1528 aa12.93□□□□□ -0.34
TRIP4-208ENST00000559833 NUTM2FA1L443 756 aa12.92□□□□□ -0.34
TRIP4-208ENST00000559833 STAC3Q96MF2 364 aa12.92□□□□□ -0.34
TRIP4-208ENST00000559833 SPATA31A3Q5VYP0 1347 aa12.91□□□□□ -0.34
TRIP4-208ENST00000559833 RGS12O14924 1447 aa12.91□□□□□ -0.34
TRIP4-208ENST00000559833 POTEB3A0JP26 581 aa12.91□□□□□ -0.34
TRIP4-208ENST00000559833 POTEBQ6S5H4 581 aa12.91□□□□□ -0.34
TRIP4-208ENST00000559833 KIF1AQ12756 1690 aa12.91□□□□□ -0.34
TRIP4-208ENST00000559833 RGPD8O14715 1765 aaPredicted RBP12.91□□□□□ -0.34
TRIP4-208ENST00000559833 EP400Q96L91 3159 aa12.91□□□□□ -0.34
TRIP4-208ENST00000559833 BCL9LQ86UU0 1499 aa12.91□□□□□ -0.34
TRIP4-208ENST00000559833 MARF1Q9Y4F3 1742 aaKnown RBP12.91□□□□□ -0.34
TRIP4-208ENST00000559833 EMP3P54852 163 aa12.9□□□□□ -0.34
TRIP4-208ENST00000559833 DPY19L2Q6NUT2 758 aa12.9□□□□□ -0.34
TRIP4-208ENST00000559833 PRAM1Q96QH2 718 aa12.9□□□□□ -0.34
TRIP4-208ENST00000559833 USP21Q9UK80 565 aa12.9□□□□□ -0.34
TRIP4-208ENST00000559833 ATRNO75882 1429 aa12.89□□□□□ -0.35
TRIP4-208ENST00000559833 XPCQ01831 940 aaPredicted RBP12.89□□□□□ -0.35
TRIP4-208ENST00000559833 PDAP1Q13442 181 aaKnown RBP12.89□□□□□ -0.35
TRIP4-208ENST00000559833 KRT28Q7Z3Y7 464 aa12.89□□□□□ -0.35
TRIP4-208ENST00000559833 TRPC5Q9UL62 973 aaPredicted RBP12.89□□□□□ -0.35
TRIP4-208ENST00000559833 USP32Q8NFA0 1604 aa12.88□□□□□ -0.35
TRIP4-208ENST00000559833 PHF8Q9UPP1 1060 aa12.88□□□□□ -0.35
TRIP4-208ENST00000559833 ADGRB2O60241 1585 aa12.87□□□□□ -0.35
TRIP4-208ENST00000559833 DCAF11Q8TEB1 546 aa12.87□□□□□ -0.35
TRIP4-208ENST00000559833 KRTAP3-3Q9BYR6 98 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms