RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 SH3BP2P78314 561 aa8.75□□□□□ -1.01
SPG11-218ENST00000559754 MYT1Q01538 1121 aa8.75□□□□□ -1.01
SPG11-218ENST00000559754 BAP1Q92560 729 aa8.75□□□□□ -1.01
SPG11-218ENST00000559754 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.75□□□□□ -1.01
SPG11-218ENST00000559754 GOPCQ9HD26 462 aa8.75□□□□□ -1.01
SPG11-218ENST00000559754 ZNF511Q8NB15 262 aa8.74□□□□□ -1.01
SPG11-218ENST00000559754 ARMC2Q8NEN0 867 aa8.74□□□□□ -1.01
SPG11-218ENST00000559754 PER1O15534 1290 aaPredicted RBP8.73□□□□□ -1.01
SPG11-218ENST00000559754 AVPP01185 164 aa8.73□□□□□ -1.01
SPG11-218ENST00000559754 BRPF1P55201 1214 aaPredicted RBP8.73□□□□□ -1.01
SPG11-218ENST00000559754 CTC1Q2NKJ3 1217 aa8.73□□□□□ -1.01
SPG11-218ENST00000559754 LINC01559Q495D7 138 aa8.73□□□□□ -1.01
SPG11-218ENST00000559754 PPP2R2DQ66LE6 453 aa8.73□□□□□ -1.01
SPG11-218ENST00000559754 PROCA1Q8NCQ7 364 aaPredicted RBP8.73□□□□□ -1.01
SPG11-218ENST00000559754 MAP10Q9P2G4 905 aa8.73□□□□□ -1.01
SPG11-218ENST00000559754 VARSP26640 1264 aaKnown RBP8.72□□□□□ -1.01
SPG11-218ENST00000559754 PCMTD1Q96MG8 357 aaPredicted RBP8.72□□□□□ -1.01
SPG11-218ENST00000559754 CRIPAKQ8N1N5 446 aa8.71□□□□□ -1.02
SPG11-218ENST00000559754 SIAH2O43255 324 aa8.7□□□□□ -1.02
SPG11-218ENST00000559754 SMPD1P17405 629 aa8.7□□□□□ -1.02
SPG11-218ENST00000559754 IL27Q8NEV9 243 aa8.7□□□□□ -1.02
SPG11-218ENST00000559754 J3QL48 77 aa8.69□□□□□ -1.02
SPG11-218ENST00000559754 AXIN1O15169 862 aa8.69□□□□□ -1.02
SPG11-218ENST00000559754 ALDH1A1P00352 501 aa8.69□□□□□ -1.02
SPG11-218ENST00000559754 SMCPP49901 116 aaPredicted RBP8.69□□□□□ -1.02
SPG11-218ENST00000559754 CTDSPL2Q05D32 466 aa8.69□□□□□ -1.02
SPG11-218ENST00000559754 NBPF14Q5TI25 921 aa8.69□□□□□ -1.02
SPG11-218ENST00000559754 AAASQ9NRG9 546 aa8.69□□□□□ -1.02
SPG11-218ENST00000559754 AGERQ15109 404 aa8.68□□□□□ -1.02
SPG11-218ENST00000559754 BPHLQ86WA6 291 aaPredicted RBP8.68□□□□□ -1.02
SPG11-218ENST00000559754 GPKOWQ92917 476 aaPredicted RBP eCLIP8.68□□□□□ -1.02
SPG11-218ENST00000559754 WASF2Q9Y6W5 498 aa8.68□□□□□ -1.02
SPG11-218ENST00000559754 ZNF787Q6DD87 383 aa8.67□□□□□ -1.02
SPG11-218ENST00000559754 MPNDQ8N594 471 aa8.67□□□□□ -1.02
SPG11-218ENST00000559754 FAM174AQ8TBP5 190 aa8.67□□□□□ -1.02
SPG11-218ENST00000559754 ST8SIA5O15466 376 aa8.66□□□□□ -1.02
SPG11-218ENST00000559754 AP1G2O75843 785 aa8.66□□□□□ -1.02
SPG11-218ENST00000559754 RFC5P40937 340 aa8.64□□□□□ -1.03
SPG11-218ENST00000559754 TMEM259Q4ZIN3 620 aa8.64□□□□□ -1.03
SPG11-218ENST00000559754 FBXO31Q5XUX0 539 aaPredicted RBP8.64□□□□□ -1.03
SPG11-218ENST00000559754 PNMA1Q8ND90 353 aa8.64□□□□□ -1.03
SPG11-218ENST00000559754 HPS1Q92902 700 aa8.64□□□□□ -1.03
SPG11-218ENST00000559754 FOXJ1Q92949 421 aa8.64□□□□□ -1.03
SPG11-218ENST00000559754 LRRN4Q8WUT4 740 aa8.63□□□□□ -1.03
SPG11-218ENST00000559754 TLL2Q9Y6L7 1015 aa8.63□□□□□ -1.03
SPG11-218ENST00000559754 ZC3H4Q9UPT8 1303 aaKnown RBP8.62□□□□□ -1.03
SPG11-218ENST00000559754 FKBPLQ9UIM3 349 aa8.62□□□□□ -1.03
SPG11-218ENST00000559754 USP17L8P0C7I0 530 aa8.61□□□□□ -1.03
SPG11-218ENST00000559754 SH3BP5LQ7L8J4 393 aa8.61□□□□□ -1.03
SPG11-218ENST00000559754 SH3RF1Q7Z6J0 888 aa8.61□□□□□ -1.03
SPG11-218ENST00000559754 CDK15Q96Q40 435 aa8.61□□□□□ -1.03
SPG11-218ENST00000559754 ADH1CP00326 375 aa8.6□□□□□ -1.03
SPG11-218ENST00000559754 NR6A1Q15406 480 aa8.6□□□□□ -1.03
SPG11-218ENST00000559754 PDXDC2PQ6P474 469 aa8.6□□□□□ -1.03
SPG11-218ENST00000559754 NNTQ13423 1086 aa8.59□□□□□ -1.03
SPG11-218ENST00000559754 ARID5BQ14865 1188 aa8.59□□□□□ -1.03
SPG11-218ENST00000559754 C4orf48Q5BLP8 95 aa8.59□□□□□ -1.03
SPG11-218ENST00000559754 MAGEB6P1A0A0J9YX57 407 aa8.58□□□□□ -1.04
SPG11-218ENST00000559754 TRMT44Q8IYL2 757 aaKnown RBP8.58□□□□□ -1.04
SPG11-218ENST00000559754 ARHGAP9Q9BRR9 750 aa8.58□□□□□ -1.04
SPG11-218ENST00000559754 C1QTNF2Q9BXJ5 285 aa8.58□□□□□ -1.04
SPG11-218ENST00000559754 CAPN5O15484 640 aaPredicted RBP8.57□□□□□ -1.04
SPG11-218ENST00000559754 PTK2Q05397 1052 aa8.57□□□□□ -1.04
SPG11-218ENST00000559754 NR5A1Q13285 461 aa8.57□□□□□ -1.04
SPG11-218ENST00000559754 SENP2Q9HC62 589 aa8.57□□□□□ -1.04
SPG11-218ENST00000559754 ATP13A2Q9NQ11 1180 aa8.57□□□□□ -1.04
SPG11-218ENST00000559754 DACH1Q9UI36 760 aa8.57□□□□□ -1.04
SPG11-218ENST00000559754 GPSM3Q9Y4H4 160 aa8.57□□□□□ -1.04
SPG11-218ENST00000559754 MAP4K5Q9Y4K4 846 aa8.57□□□□□ -1.04
SPG11-218ENST00000559754 PRKCSHP14314 528 aaPredicted RBP8.56□□□□□ -1.04
SPG11-218ENST00000559754 GMPR2Q9P2T1 348 aaKnown RBP8.56□□□□□ -1.04
SPG11-218ENST00000559754 CDV3Q9UKY7 258 aaKnown RBP8.56□□□□□ -1.04
SPG11-218ENST00000559754 VASH1Q7L8A9 365 aaPredicted RBP8.55□□□□□ -1.04
SPG11-218ENST00000559754 ZBTB33Q86T24 672 aa8.55□□□□□ -1.04
SPG11-218ENST00000559754 KIFC2Q96AC6 838 aa8.55□□□□□ -1.04
SPG11-218ENST00000559754 CARD14Q9BXL6 1004 aa8.55□□□□□ -1.04
SPG11-218ENST00000559754 HMX1Q9NP08 348 aaPredicted RBP8.55□□□□□ -1.04
SPG11-218ENST00000559754 POTECB2RU33 542 aa8.54□□□□□ -1.04
SPG11-218ENST00000559754 C11orf95C9JLR9 678 aaPredicted RBP8.54□□□□□ -1.04
SPG11-218ENST00000559754 BANK1Q8NDB2 785 aa8.54□□□□□ -1.04
SPG11-218ENST00000559754 WDR4P57081 412 aaKnown RBP8.53□□□□□ -1.04
SPG11-218ENST00000559754 ERFEQ4G0M1 354 aa8.53□□□□□ -1.04
SPG11-218ENST00000559754 EPS8L1Q8TE68 723 aa8.53□□□□□ -1.04
SPG11-218ENST00000559754 SLC10A4Q96EP9 437 aa8.53□□□□□ -1.04
SPG11-218ENST00000559754 APBB1O00213 710 aa8.52□□□□□ -1.05
SPG11-218ENST00000559754 SOCS7O14512 581 aa8.52□□□□□ -1.05
SPG11-218ENST00000559754 GRM5P41594 1212 aa8.52□□□□□ -1.05
SPG11-218ENST00000559754 TIMP2P16035 220 aa8.51□□□□□ -1.05
SPG11-218ENST00000559754 FSHRP23945 695 aa8.51□□□□□ -1.05
SPG11-218ENST00000559754 TRIM47Q96LD4 638 aa8.51□□□□□ -1.05
SPG11-218ENST00000559754 KLF16Q9BXK1 252 aaPredicted RBP8.5□□□□□ -1.05
SPG11-218ENST00000559754 TRIM34Q9BYJ4 488 aa8.5□□□□□ -1.05
SPG11-218ENST00000559754 ZIC2O95409 532 aaPredicted RBP8.49□□□□□ -1.05
SPG11-218ENST00000559754 NR3C2P08235 984 aa8.49□□□□□ -1.05
SPG11-218ENST00000559754 CCDC116Q8IYX3 515 aa8.49□□□□□ -1.05
SPG11-218ENST00000559754 ADAM32Q8TC27 787 aa8.49□□□□□ -1.05
SPG11-218ENST00000559754 SCARF1Q14162 830 aa8.48□□□□□ -1.05
SPG11-218ENST00000559754 ZNF775Q96BV0 537 aaPredicted RBP8.48□□□□□ -1.05
SPG11-218ENST00000559754 GJD4Q96KN9 370 aaPredicted RBP8.48□□□□□ -1.05
SPG11-218ENST00000559754 EMILIN1Q9Y6C2 1016 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms