RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 KCNH2Q12809 1159 aa9.57□□□□□ -0.88
CTDSPL2-207ENST00000559738 TSC1Q92574 1164 aa9.57□□□□□ -0.88
CTDSPL2-207ENST00000559738 LYPD8Q6UX82 237 aa9.56□□□□□ -0.88
CTDSPL2-207ENST00000559738 GOPCQ9HD26 462 aa9.56□□□□□ -0.88
CTDSPL2-207ENST00000559738 AAASQ9NRG9 546 aa9.56□□□□□ -0.88
CTDSPL2-207ENST00000559738 J3QL48 77 aa9.55□□□□□ -0.88
CTDSPL2-207ENST00000559738 SMPD1P17405 629 aa9.55□□□□□ -0.88
CTDSPL2-207ENST00000559738 CTHP32929 405 aa9.55□□□□□ -0.88
CTDSPL2-207ENST00000559738 SH3BP2P78314 561 aa9.55□□□□□ -0.88
CTDSPL2-207ENST00000559738 LINC01559Q495D7 138 aa9.55□□□□□ -0.88
CTDSPL2-207ENST00000559738 ZNF787Q6DD87 383 aa9.55□□□□□ -0.88
CTDSPL2-207ENST00000559738 PER1O15534 1290 aaPredicted RBP9.54□□□□□ -0.88
CTDSPL2-207ENST00000559738 AVPP01185 164 aa9.54□□□□□ -0.88
CTDSPL2-207ENST00000559738 EHBP1Q8NDI1 1231 aa9.54□□□□□ -0.88
CTDSPL2-207ENST00000559738 PPP2R2DQ66LE6 453 aa9.53□□□□□ -0.88
CTDSPL2-207ENST00000559738 BAP1Q92560 729 aa9.53□□□□□ -0.88
CTDSPL2-207ENST00000559738 MAP10Q9P2G4 905 aa9.53□□□□□ -0.88
CTDSPL2-207ENST00000559738 CRIPAKQ8N1N5 446 aa9.52□□□□□ -0.89
CTDSPL2-207ENST00000559738 ATP1B4Q9UN42 357 aaPredicted RBP9.52□□□□□ -0.89
CTDSPL2-207ENST00000559738 AXIN1O15169 862 aa9.51□□□□□ -0.89
CTDSPL2-207ENST00000559738 F12P00748 615 aaPredicted RBP9.51□□□□□ -0.89
CTDSPL2-207ENST00000559738 CTC1Q2NKJ3 1217 aa9.51□□□□□ -0.89
CTDSPL2-207ENST00000559738 ZNF511Q8NB15 262 aa9.51□□□□□ -0.89
CTDSPL2-207ENST00000559738 PCMTD1Q96MG8 357 aaPredicted RBP9.51□□□□□ -0.89
CTDSPL2-207ENST00000559738 ALDH1A1P00352 501 aa9.5□□□□□ -0.89
CTDSPL2-207ENST00000559738 CTDSPL2Q05D32 466 aa9.5□□□□□ -0.89
CTDSPL2-207ENST00000559738 HELBQ8NG08 1087 aaPredicted RBP9.5□□□□□ -0.89
CTDSPL2-207ENST00000559738 POTECB2RU33 542 aa9.49□□□□□ -0.89
CTDSPL2-207ENST00000559738 DACH1Q9UI36 760 aa9.49□□□□□ -0.89
CTDSPL2-207ENST00000559738 SIAH2O43255 324 aa9.48□□□□□ -0.89
CTDSPL2-207ENST00000559738 HPS1Q92902 700 aa9.48□□□□□ -0.89
CTDSPL2-207ENST00000559738 RFC5P40937 340 aa9.47□□□□□ -0.89
CTDSPL2-207ENST00000559738 SMCPP49901 116 aaPredicted RBP9.47□□□□□ -0.89
CTDSPL2-207ENST00000559738 TLL2Q9Y6L7 1015 aa9.47□□□□□ -0.89
CTDSPL2-207ENST00000559738 LRRN4Q8WUT4 740 aa9.46□□□□□ -0.9
CTDSPL2-207ENST00000559738 AP1G2O75843 785 aa9.45□□□□□ -0.9
CTDSPL2-207ENST00000559738 WASF2Q9Y6W5 498 aa9.45□□□□□ -0.9
CTDSPL2-207ENST00000559738 VARSP26640 1264 aaKnown RBP9.44□□□□□ -0.9
CTDSPL2-207ENST00000559738 FOXJ1Q92949 421 aa9.44□□□□□ -0.9
CTDSPL2-207ENST00000559738 GMPR2Q9P2T1 348 aaKnown RBP9.43□□□□□ -0.9
CTDSPL2-207ENST00000559738 AGERQ15109 404 aa9.41□□□□□ -0.9
CTDSPL2-207ENST00000559738 USP17L8P0C7I0 530 aa9.4□□□□□ -0.9
CTDSPL2-207ENST00000559738 FAM174AQ8TBP5 190 aa9.4□□□□□ -0.9
CTDSPL2-207ENST00000559738 ZNF775Q96BV0 537 aaPredicted RBP9.4□□□□□ -0.9
CTDSPL2-207ENST00000559738 HMX1Q9NP08 348 aaPredicted RBP9.4□□□□□ -0.9
CTDSPL2-207ENST00000559738 ATP13A2Q9NQ11 1180 aa9.4□□□□□ -0.9
CTDSPL2-207ENST00000559738 C4orf48Q5BLP8 95 aa9.39□□□□□ -0.91
CTDSPL2-207ENST00000559738 BPHLQ86WA6 291 aaPredicted RBP9.39□□□□□ -0.91
CTDSPL2-207ENST00000559738 ARMC2Q8NEN0 867 aa9.39□□□□□ -0.91
CTDSPL2-207ENST00000559738 C11orf95C9JLR9 678 aaPredicted RBP9.38□□□□□ -0.91
CTDSPL2-207ENST00000559738 NR6A1Q15406 480 aa9.38□□□□□ -0.91
CTDSPL2-207ENST00000559738 TMEM259Q4ZIN3 620 aa9.38□□□□□ -0.91
CTDSPL2-207ENST00000559738 NBPF14Q5TI25 921 aa9.38□□□□□ -0.91
CTDSPL2-207ENST00000559738 EPS8L1Q8TE68 723 aa9.38□□□□□ -0.91
CTDSPL2-207ENST00000559738 NNTQ13423 1086 aa9.37□□□□□ -0.91
CTDSPL2-207ENST00000559738 ARID5BQ14865 1188 aa9.37□□□□□ -0.91
CTDSPL2-207ENST00000559738 MPNDQ8N594 471 aa9.37□□□□□ -0.91
CTDSPL2-207ENST00000559738 CAPN5O15484 640 aaPredicted RBP9.36□□□□□ -0.91
CTDSPL2-207ENST00000559738 ADH1CP00326 375 aa9.36□□□□□ -0.91
CTDSPL2-207ENST00000559738 MAGEB6P1A0A0J9YX57 407 aa9.35□□□□□ -0.91
CTDSPL2-207ENST00000559738 BMP1P13497 986 aa9.35□□□□□ -0.91
CTDSPL2-207ENST00000559738 SH3BP5LQ7L8J4 393 aa9.34□□□□□ -0.91
CTDSPL2-207ENST00000559738 SH3RF1Q7Z6J0 888 aa9.34□□□□□ -0.91
CTDSPL2-207ENST00000559738 CDK15Q96Q40 435 aa9.34□□□□□ -0.91
CTDSPL2-207ENST00000559738 TRIM34Q9BYJ4 488 aa9.34□□□□□ -0.91
CTDSPL2-207ENST00000559738 CARD14Q9BXL6 1004 aa9.33□□□□□ -0.92
CTDSPL2-207ENST00000559738 SENP2Q9HC62 589 aa9.33□□□□□ -0.92
CTDSPL2-207ENST00000559738 FKBPLQ9UIM3 349 aa9.33□□□□□ -0.92
CTDSPL2-207ENST00000559738 SNRPBP14678 240 aaKnown RBP9.32□□□□□ -0.92
CTDSPL2-207ENST00000559738 GPKOWQ92917 476 aaPredicted RBP eCLIP9.32□□□□□ -0.92
CTDSPL2-207ENST00000559738 GJD4Q96KN9 370 aaPredicted RBP9.32□□□□□ -0.92
CTDSPL2-207ENST00000559738 TRIM47Q96LD4 638 aa9.32□□□□□ -0.92
CTDSPL2-207ENST00000559738 C1QTNF2Q9BXJ5 285 aa9.32□□□□□ -0.92
CTDSPL2-207ENST00000559738 WDR4P57081 412 aaKnown RBP9.31□□□□□ -0.92
CTDSPL2-207ENST00000559738 BANK1Q8NDB2 785 aa9.31□□□□□ -0.92
CTDSPL2-207ENST00000559738 SNRKQ9NRH2 765 aa9.31□□□□□ -0.92
CTDSPL2-207ENST00000559738 TIMP2P16035 220 aa9.3□□□□□ -0.92
CTDSPL2-207ENST00000559738 TRIM46Q7Z4K8 759 aa9.3□□□□□ -0.92
CTDSPL2-207ENST00000559738 MTMR14Q8NCE2 650 aa9.3□□□□□ -0.92
CTDSPL2-207ENST00000559738 NR3C2P08235 984 aa9.29□□□□□ -0.92
CTDSPL2-207ENST00000559738 GRM5P41594 1212 aa9.29□□□□□ -0.92
CTDSPL2-207ENST00000559738 NR5A1Q13285 461 aa9.29□□□□□ -0.92
CTDSPL2-207ENST00000559738 KIFC2Q96AC6 838 aa9.29□□□□□ -0.92
CTDSPL2-207ENST00000559738 OCSTAMPQ9BR26 566 aa9.29□□□□□ -0.92
CTDSPL2-207ENST00000559738 FSHRP23945 695 aa9.28□□□□□ -0.92
CTDSPL2-207ENST00000559738 ERFEQ4G0M1 354 aa9.28□□□□□ -0.92
CTDSPL2-207ENST00000559738 PDXDC2PQ6P474 469 aa9.28□□□□□ -0.92
CTDSPL2-207ENST00000559738 VASH1Q7L8A9 365 aaPredicted RBP9.28□□□□□ -0.92
CTDSPL2-207ENST00000559738 TRMT44Q8IYL2 757 aaKnown RBP9.28□□□□□ -0.92
CTDSPL2-207ENST00000559738 ARHGAP9Q9BRR9 750 aa9.28□□□□□ -0.92
CTDSPL2-207ENST00000559738 KLF16Q9BXK1 252 aaPredicted RBP9.27□□□□□ -0.93
CTDSPL2-207ENST00000559738 MAP4K5Q9Y4K4 846 aa9.27□□□□□ -0.93
CTDSPL2-207ENST00000559738 ZC3H4Q9UPT8 1303 aaKnown RBP9.27□□□□□ -0.93
CTDSPL2-207ENST00000559738 ZIC2O95409 532 aaPredicted RBP9.26□□□□□ -0.93
CTDSPL2-207ENST00000559738 ITPKCQ96DU7 683 aa9.26□□□□□ -0.93
CTDSPL2-207ENST00000559738 ZFAND3Q9H8U3 227 aa9.26□□□□□ -0.93
CTDSPL2-207ENST00000559738 GPR37L1O60883 481 aa9.25□□□□□ -0.93
CTDSPL2-207ENST00000559738 SOCS7O14512 581 aa9.24□□□□□ -0.93
CTDSPL2-207ENST00000559738 TMEM132AQ24JP5 1023 aa9.24□□□□□ -0.93
CTDSPL2-207ENST00000559738 MRPL14Q6P1L8 145 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms