RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 CROCC2H7BZ55 1655 aa13.35□□□□□ -0.27
CARMIL3-202ENST00000559694 HMMRO75330 724 aa13.34□□□□□ -0.27
CARMIL3-202ENST00000559694 COG6Q9Y2V7 657 aa13.34□□□□□ -0.27
CARMIL3-202ENST00000559694 KCNJ4P48050 445 aa13.34□□□□□ -0.27
CARMIL3-202ENST00000559694 GORABQ5T7V8 394 aa13.34□□□□□ -0.27
CARMIL3-202ENST00000559694 FCHSD2O94868 740 aa13.33□□□□□ -0.28
CARMIL3-202ENST00000559694 CABP4P57796 275 aa13.33□□□□□ -0.28
CARMIL3-202ENST00000559694 TESK2Q96S53 571 aa13.33□□□□□ -0.28
CARMIL3-202ENST00000559694 CFAP74Q9C0B2 1584 aa13.33□□□□□ -0.28
CARMIL3-202ENST00000559694 C9orf78Q9NZ63 289 aaPredicted RBP13.33□□□□□ -0.28
CARMIL3-202ENST00000559694 RALGAPBQ86X10 1494 aa13.33□□□□□ -0.28
CARMIL3-202ENST00000559694 TTC21BQ7Z4L5 1316 aa13.33□□□□□ -0.28
CARMIL3-202ENST00000559694 FYB1O15117 783 aa13.32□□□□□ -0.28
CARMIL3-202ENST00000559694 DDX58O95786 925 aaKnown RBP13.32□□□□□ -0.28
CARMIL3-202ENST00000559694 CABLES1Q8TDN4 633 aa13.32□□□□□ -0.28
CARMIL3-202ENST00000559694 ANO8Q9HCE9 1232 aaPredicted RBP13.32□□□□□ -0.28
CARMIL3-202ENST00000559694 YTHDC2Q9H6S0 1430 aaKnown RBP13.32□□□□□ -0.28
CARMIL3-202ENST00000559694 RIMBP3CA6NJZ7 1639 aa13.31□□□□□ -0.28
CARMIL3-202ENST00000559694 RIMBP3BA6NNM3 1639 aa13.31□□□□□ -0.28
CARMIL3-202ENST00000559694 RIMBP3Q9UFD9 1639 aa13.31□□□□□ -0.28
CARMIL3-202ENST00000559694 TSR2Q969E8 191 aaKnown RBP13.31□□□□□ -0.28
CARMIL3-202ENST00000559694 LMTK3Q96Q04 1460 aa13.31□□□□□ -0.28
CARMIL3-202ENST00000559694 ZRANB1Q9UGI0 708 aa13.31□□□□□ -0.28
CARMIL3-202ENST00000559694 MAST1Q9Y2H9 1570 aa13.31□□□□□ -0.28
CARMIL3-202ENST00000559694 EXOSC9Q06265 439 aaKnown RBP13.31□□□□□ -0.28
CARMIL3-202ENST00000559694 ORAI2Q96SN7 254 aa13.31□□□□□ -0.28
CARMIL3-202ENST00000559694 API5Q9BZZ5 524 aaKnown RBP13.3□□□□□ -0.28
CARMIL3-202ENST00000559694 SHROOM2Q13796 1616 aa13.3□□□□□ -0.28
CARMIL3-202ENST00000559694 KDM5DQ9BY66 1539 aa13.29□□□□□ -0.28
CARMIL3-202ENST00000559694 L1TD1Q5T7N2 865 aaKnown RBP13.29□□□□□ -0.28
CARMIL3-202ENST00000559694 RIC3Q7Z5B4 369 aa13.29□□□□□ -0.28
CARMIL3-202ENST00000559694 PDE4AP27815 886 aa13.29□□□□□ -0.28
CARMIL3-202ENST00000559694 PPIP5K1Q6PFW1 1433 aa13.29□□□□□ -0.28
CARMIL3-202ENST00000559694 THUMPD2Q9BTF0 503 aaKnown RBP13.29□□□□□ -0.28
CARMIL3-202ENST00000559694 RRP1P56182 461 aaKnown RBP13.28□□□□□ -0.28
CARMIL3-202ENST00000559694 HSP90AB2PQ58FF8 381 aa13.28□□□□□ -0.28
CARMIL3-202ENST00000559694 DZIP1LQ8IYY4 767 aaKnown RBP13.28□□□□□ -0.28
CARMIL3-202ENST00000559694 TMPOP42166 694 aaKnown RBP13.27□□□□□ -0.28
CARMIL3-202ENST00000559694 GSE1Q14687 1217 aa13.27□□□□□ -0.28
CARMIL3-202ENST00000559694 TWISTNBQ3B726 338 aaPredicted RBP13.27□□□□□ -0.28
CARMIL3-202ENST00000559694 FGD1P98174 961 aa13.27□□□□□ -0.29
CARMIL3-202ENST00000559694 DCTN1Q14203 1278 aa13.27□□□□□ -0.29
CARMIL3-202ENST00000559694 EXOC6Q8TAG9 804 aa13.27□□□□□ -0.29
CARMIL3-202ENST00000559694 NINLQ9Y2I6 1382 aa13.27□□□□□ -0.29
CARMIL3-202ENST00000559694 G3V3G9 751 aa13.27□□□□□ -0.29
CARMIL3-202ENST00000559694 DCAF8Q5TAQ9 597 aa13.27□□□□□ -0.29
CARMIL3-202ENST00000559694 FRAT2O75474 233 aaPredicted RBP13.26□□□□□ -0.29
CARMIL3-202ENST00000559694 HSP90AB1P08238 724 aaKnown RBP13.26□□□□□ -0.29
CARMIL3-202ENST00000559694 SF3B2Q13435 895 aaKnown RBP13.26□□□□□ -0.29
CARMIL3-202ENST00000559694 NFE2L2Q16236 605 aa13.26□□□□□ -0.29
CARMIL3-202ENST00000559694 HDGFL1Q5TGJ6 251 aa13.26□□□□□ -0.29
CARMIL3-202ENST00000559694 CRBNQ96SW2 442 aa13.26□□□□□ -0.29
CARMIL3-202ENST00000559694 TTC21AQ8NDW8 1320 aa13.26□□□□□ -0.29
CARMIL3-202ENST00000559694 PRKCSHP14314 528 aaPredicted RBP13.26□□□□□ -0.29
CARMIL3-202ENST00000559694 SLC4A3P48751 1232 aa13.26□□□□□ -0.29
CARMIL3-202ENST00000559694 MCM10Q7L590 875 aa13.26□□□□□ -0.29
CARMIL3-202ENST00000559694 MIS18AQ9NYP9 233 aa13.26□□□□□ -0.29
CARMIL3-202ENST00000559694 FAM177BA6PVY3 158 aa13.25□□□□□ -0.29
CARMIL3-202ENST00000559694 GOLGA6L22H0YM25 854 aa13.25□□□□□ -0.29
CARMIL3-202ENST00000559694 CCDC30Q5VVM6 783 aa13.25□□□□□ -0.29
CARMIL3-202ENST00000559694 SLKQ9H2G2 1235 aaPredicted RBP13.25□□□□□ -0.29
CARMIL3-202ENST00000559694 TAOK2Q9UL54 1235 aa13.25□□□□□ -0.29
CARMIL3-202ENST00000559694 GNAT3A8MTJ3 354 aa13.25□□□□□ -0.29
CARMIL3-202ENST00000559694 PTCD1O75127 700 aaKnown RBP13.25□□□□□ -0.29
CARMIL3-202ENST00000559694 ANKRD36BQ8N2N9 1353 aa13.25□□□□□ -0.29
CARMIL3-202ENST00000559694 HECW2Q9P2P5 1572 aa13.25□□□□□ -0.29
CARMIL3-202ENST00000559694 ANKRD24Q8TF21 1146 aa13.25□□□□□ -0.29
CARMIL3-202ENST00000559694 AMER1Q5JTC6 1135 aaPredicted RBP13.25□□□□□ -0.29
CARMIL3-202ENST00000559694 SLAIN2Q9P270 581 aa13.25□□□□□ -0.29
CARMIL3-202ENST00000559694 KIF16BQ96L93 1317 aa13.24□□□□□ -0.29
CARMIL3-202ENST00000559694 LRRC59Q96AG4 307 aaKnown RBP13.24□□□□□ -0.29
CARMIL3-202ENST00000559694 EIF2AK4Q9P2K8 1649 aaKnown RBP13.24□□□□□ -0.29
CARMIL3-202ENST00000559694 EXOC5O00471 708 aa13.24□□□□□ -0.29
CARMIL3-202ENST00000559694 KLHL34Q8N239 644 aa13.24□□□□□ -0.29
CARMIL3-202ENST00000559694 SPRYD3Q8NCJ5 442 aa13.24□□□□□ -0.29
CARMIL3-202ENST00000559694 BTBD11A6QL63 1104 aa13.24□□□□□ -0.29
CARMIL3-202ENST00000559694 NCLP19338 710 aaKnown RBP13.24□□□□□ -0.29
CARMIL3-202ENST00000559694 MPRIPQ6WCQ1 1025 aa13.24□□□□□ -0.29
CARMIL3-202ENST00000559694 PUS7Q96PZ0 661 aaKnown RBP13.24□□□□□ -0.29
CARMIL3-202ENST00000559694 CARD14Q9BXL6 1004 aa13.24□□□□□ -0.29
CARMIL3-202ENST00000559694 GCP02774 474 aa13.23□□□□□ -0.29
CARMIL3-202ENST00000559694 IL27Q8NEV9 243 aa13.23□□□□□ -0.29
CARMIL3-202ENST00000559694 DDX17Q92841 729 aaKnown RBP13.23□□□□□ -0.29
CARMIL3-202ENST00000559694 C8orf37Q96NL8 207 aa13.23□□□□□ -0.29
CARMIL3-202ENST00000559694 DDX19BQ9UMR2 479 aa13.23□□□□□ -0.29
CARMIL3-202ENST00000559694 PLXNC1O60486 1568 aa13.23□□□□□ -0.29
CARMIL3-202ENST00000559694 TRIM6-TRIM34B2RNG4 842 aa13.23□□□□□ -0.29
CARMIL3-202ENST00000559694 SLC4A2P04920 1241 aa13.23□□□□□ -0.29
CARMIL3-202ENST00000559694 ARAP3Q8WWN8 1544 aa13.23□□□□□ -0.29
CARMIL3-202ENST00000559694 PANK1Q8TE04 598 aa13.23□□□□□ -0.29
CARMIL3-202ENST00000559694 ZNF428Q96B54 188 aa13.22□□□□□ -0.29
CARMIL3-202ENST00000559694 NAP1L2Q9ULW6 460 aaPredicted RBP13.22□□□□□ -0.29
CARMIL3-202ENST00000559694 CDC42BPBQ9Y5S2 1711 aa13.22□□□□□ -0.29
CARMIL3-202ENST00000559694 WDR63Q8IWG1 891 aa13.22□□□□□ -0.29
CARMIL3-202ENST00000559694 AMOTQ4VCS5 1084 aa13.22□□□□□ -0.29
CARMIL3-202ENST00000559694 GZF1Q9H116 711 aaPredicted RBP13.22□□□□□ -0.29
CARMIL3-202ENST00000559694 ANKRD45Q5TZF3 282 aa13.22□□□□□ -0.29
CARMIL3-202ENST00000559694 WWC1Q8IX03 1113 aa13.22□□□□□ -0.29
CARMIL3-202ENST00000559694 MYL6BP14649 208 aa13.21□□□□□ -0.29
CARMIL3-202ENST00000559694 KIAA1211Q6ZU35 1233 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms