RNA–Protein interactions for RNA: ENST00000559601.2

AP3S2-210, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 4

Gene AP3S2, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-210ENST00000559601 TBC1D2Q9BYX2 928 aa8.6□□□□□ -1.03
AP3S2-210ENST00000559601 PLEKHG3A1L390 1219 aa8.59□□□□□ -1.03
AP3S2-210ENST00000559601 SPTLC1O15269 473 aa8.59□□□□□ -1.03
AP3S2-210ENST00000559601 PRPF38BQ5VTL8 546 aaKnown RBP8.59□□□□□ -1.03
AP3S2-210ENST00000559601 LYPD8Q6UX82 237 aa8.59□□□□□ -1.03
AP3S2-210ENST00000559601 NPAS3Q8IXF0 933 aa8.59□□□□□ -1.03
AP3S2-210ENST00000559601 PARP9Q8IXQ6 854 aa8.59□□□□□ -1.03
AP3S2-210ENST00000559601 NXF1Q9UBU9 619 aaKnown RBP8.59□□□□□ -1.03
AP3S2-210ENST00000559601 BAP1Q92560 729 aa8.58□□□□□ -1.04
AP3S2-210ENST00000559601 TRIM66O15016 1216 aa8.57□□□□□ -1.04
AP3S2-210ENST00000559601 CAPN5O15484 640 aaPredicted RBP8.57□□□□□ -1.04
AP3S2-210ENST00000559601 VEGFBP49765 207 aa8.57□□□□□ -1.04
AP3S2-210ENST00000559601 TRIM46Q7Z4K8 759 aa8.57□□□□□ -1.04
AP3S2-210ENST00000559601 F12P00748 615 aaPredicted RBP8.56□□□□□ -1.04
AP3S2-210ENST00000559601 TUSC1Q2TAM9 212 aa8.56□□□□□ -1.04
AP3S2-210ENST00000559601 IRF7Q92985 503 aa8.56□□□□□ -1.04
AP3S2-210ENST00000559601 AK7Q96M32 723 aa8.56□□□□□ -1.04
AP3S2-210ENST00000559601 ZBTB3Q9H5J0 574 aa8.56□□□□□ -1.04
AP3S2-210ENST00000559601 CFAP99D6REC4 459 aa8.54□□□□□ -1.04
AP3S2-210ENST00000559601 LINC01559Q495D7 138 aa8.54□□□□□ -1.04
AP3S2-210ENST00000559601 TLL2Q9Y6L7 1015 aa8.54□□□□□ -1.04
AP3S2-210ENST00000559601 BMP1P13497 986 aa8.53□□□□□ -1.04
AP3S2-210ENST00000559601 HRCP23327 699 aa8.53□□□□□ -1.04
AP3S2-210ENST00000559601 SUZ12Q15022 739 aaKnown RBP8.53□□□□□ -1.04
AP3S2-210ENST00000559601 FAM174AQ8TBP5 190 aa8.53□□□□□ -1.04
AP3S2-210ENST00000559601 CDK15Q96Q40 435 aa8.53□□□□□ -1.04
AP3S2-210ENST00000559601 PCDHB15Q9Y5E8 787 aa8.53□□□□□ -1.04
AP3S2-210ENST00000559601 NNTQ13423 1086 aa8.52□□□□□ -1.05
AP3S2-210ENST00000559601 ERBB4Q15303 1308 aa8.52□□□□□ -1.05
AP3S2-210ENST00000559601 H3BM21 787 aa8.51□□□□□ -1.05
AP3S2-210ENST00000559601 ADH1CP00326 375 aa8.51□□□□□ -1.05
AP3S2-210ENST00000559601 RIC3Q7Z5B4 369 aa8.51□□□□□ -1.05
AP3S2-210ENST00000559601 KLF16Q9BXK1 252 aaPredicted RBP8.51□□□□□ -1.05
AP3S2-210ENST00000559601 TIMP2P16035 220 aa8.5□□□□□ -1.05
AP3S2-210ENST00000559601 CTHP32929 405 aa8.5□□□□□ -1.05
AP3S2-210ENST00000559601 MRPL14Q6P1L8 145 aaKnown RBP8.48□□□□□ -1.05
AP3S2-210ENST00000559601 ZFP42Q96MM3 310 aa8.48□□□□□ -1.05
AP3S2-210ENST00000559601 MAP10Q9P2G4 905 aa8.48□□□□□ -1.05
AP3S2-210ENST00000559601 NR5A1Q13285 461 aa8.47□□□□□ -1.05
AP3S2-210ENST00000559601 MYSM1Q5VVJ2 828 aa8.47□□□□□ -1.05
AP3S2-210ENST00000559601 BPHLQ86WA6 291 aaPredicted RBP8.47□□□□□ -1.05
AP3S2-210ENST00000559601 ARMC2Q8NEN0 867 aa8.47□□□□□ -1.05
AP3S2-210ENST00000559601 LILRB3O75022 631 aa8.46□□□□□ -1.06
AP3S2-210ENST00000559601 WDR4P57081 412 aaKnown RBP8.46□□□□□ -1.06
AP3S2-210ENST00000559601 PDE4DQ08499 809 aa8.46□□□□□ -1.06
AP3S2-210ENST00000559601 SCARF1Q14162 830 aa8.46□□□□□ -1.06
AP3S2-210ENST00000559601 CABLES1Q8TDN4 633 aa8.46□□□□□ -1.06
AP3S2-210ENST00000559601 FOXJ1Q92949 421 aa8.46□□□□□ -1.06
AP3S2-210ENST00000559601 C1QTNF2Q9BXJ5 285 aa8.46□□□□□ -1.06
AP3S2-210ENST00000559601 SH3RF1Q7Z6J0 888 aa8.45□□□□□ -1.06
AP3S2-210ENST00000559601 LIMD1Q9UGP4 676 aa8.45□□□□□ -1.06
AP3S2-210ENST00000559601 MAP4K5Q9Y4K4 846 aa8.45□□□□□ -1.06
AP3S2-210ENST00000559601 PER1O15534 1290 aaPredicted RBP8.44□□□□□ -1.06
AP3S2-210ENST00000559601 C4orf48Q5BLP8 95 aa8.44□□□□□ -1.06
AP3S2-210ENST00000559601 NBPF14Q5TI25 921 aa8.44□□□□□ -1.06
AP3S2-210ENST00000559601 QPCTQ16769 361 aa8.43□□□□□ -1.06
AP3S2-210ENST00000559601 TRMT44Q8IYL2 757 aaKnown RBP8.43□□□□□ -1.06
AP3S2-210ENST00000559601 GPKOWQ92917 476 aaPredicted RBP eCLIP8.43□□□□□ -1.06
AP3S2-210ENST00000559601 VSIG8P0DPA2 414 aa8.42□□□□□ -1.06
AP3S2-210ENST00000559601 GRM5P41594 1212 aa8.42□□□□□ -1.06
AP3S2-210ENST00000559601 KCTD17Q8N5Z5 321 aa8.42□□□□□ -1.06
AP3S2-210ENST00000559601 HELBQ8NG08 1087 aaPredicted RBP8.42□□□□□ -1.06
AP3S2-210ENST00000559601 SH3BP5LQ7L8J4 393 aa8.41□□□□□ -1.06
AP3S2-210ENST00000559601 PURBQ96QR8 312 aaKnown RBP8.41□□□□□ -1.06
AP3S2-210ENST00000559601 RSPH6AQ9H0K4 717 aa8.41□□□□□ -1.06
AP3S2-210ENST00000559601 NUTM2BA6NNL0 878 aaPredicted RBP8.4□□□□□ -1.06
AP3S2-210ENST00000559601 NUTM2EB1AL46 878 aaPredicted RBP8.4□□□□□ -1.06
AP3S2-210ENST00000559601 ZIC2O95409 532 aaPredicted RBP8.4□□□□□ -1.06
AP3S2-210ENST00000559601 NR3C2P08235 984 aa8.4□□□□□ -1.06
AP3S2-210ENST00000559601 CLK2P49760 499 aaKnown RBP8.4□□□□□ -1.06
AP3S2-210ENST00000559601 CSPP1Q1MSJ5 1256 aa8.4□□□□□ -1.06
AP3S2-210ENST00000559601 NUTM2DQ5VT03 806 aaPredicted RBP8.4□□□□□ -1.06
AP3S2-210ENST00000559601 NUTM2AQ8IVF1 878 aaPredicted RBP8.4□□□□□ -1.06
AP3S2-210ENST00000559601 ITPKCQ96DU7 683 aa8.4□□□□□ -1.06
AP3S2-210ENST00000559601 AGERQ15109 404 aa8.39□□□□□ -1.07
AP3S2-210ENST00000559601 MEIOBQ8N635 442 aa8.39□□□□□ -1.07
AP3S2-210ENST00000559601 ZFAND3Q9H8U3 227 aa8.38□□□□□ -1.07
AP3S2-210ENST00000559601 KCNMA1Q12791 1236 aa8.37□□□□□ -1.07
AP3S2-210ENST00000559601 ARID5BQ14865 1188 aa8.37□□□□□ -1.07
AP3S2-210ENST00000559601 SOBPA7XYQ1 873 aa8.36□□□□□ -1.07
AP3S2-210ENST00000559601 GSK3AP49840 483 aa8.36□□□□□ -1.07
AP3S2-210ENST00000559601 RTL5Q5HYW3 569 aaPredicted RBP8.36□□□□□ -1.07
AP3S2-210ENST00000559601 LINC00528Q8N1L1 170 aa8.36□□□□□ -1.07
AP3S2-210ENST00000559601 SLC24A3Q9HC58 644 aa8.36□□□□□ -1.07
AP3S2-210ENST00000559601 UPP2O95045 317 aa8.35□□□□□ -1.07
AP3S2-210ENST00000559601 FSHRP23945 695 aa8.35□□□□□ -1.07
AP3S2-210ENST00000559601 TSC1Q92574 1164 aa8.35□□□□□ -1.07
AP3S2-210ENST00000559601 EMILIN1Q9Y6C2 1016 aa8.35□□□□□ -1.07
AP3S2-210ENST00000559601 ZC3H4Q9UPT8 1303 aaKnown RBP8.34□□□□□ -1.07
AP3S2-210ENST00000559601 CDV3Q9UKY7 258 aaKnown RBP8.34□□□□□ -1.07
AP3S2-210ENST00000559601 SOS2Q07890 1332 aaPredicted RBP8.33□□□□□ -1.08
AP3S2-210ENST00000559601 MAN1A2O60476 641 aa8.33□□□□□ -1.08
AP3S2-210ENST00000559601 PDXDC2PQ6P474 469 aa8.33□□□□□ -1.08
AP3S2-210ENST00000559601 VASH1Q7L8A9 365 aaPredicted RBP8.33□□□□□ -1.08
AP3S2-210ENST00000559601 CCDC116Q8IYX3 515 aa8.33□□□□□ -1.08
AP3S2-210ENST00000559601 TSEN34Q9BSV6 310 aaKnown RBP8.33□□□□□ -1.08
AP3S2-210ENST00000559601 ERFEQ4G0M1 354 aa8.32□□□□□ -1.08
AP3S2-210ENST00000559601 BMP2P12643 396 aa8.31□□□□□ -1.08
AP3S2-210ENST00000559601 TMEM151AQ8N4L1 468 aa8.31□□□□□ -1.08
AP3S2-210ENST00000559601 SKIV2LQ15477 1246 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms