RNA–Protein interactions for RNA: ENST00000559573.3

FAM227B-208, Transcript of family with sequence similarity 227 member B, human

TSL 3

Gene FAM227B, Length 2,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM227B-208	ENST00000559573	EIF4G2	P78344	907 aa	Known RBP eCLIP	14.16	□□□□□ -0.14
FAM227B-208	ENST00000559573	ABTB2	Q8N961	1025 aa		14.16	□□□□□ -0.14
FAM227B-208	ENST00000559573	ZC3H6	P61129	1189 aa	Known RBP	14.15	□□□□□ -0.14
FAM227B-208	ENST00000559573	POTEA	Q6S8J7	498 aa		14.15	□□□□□ -0.14
FAM227B-208	ENST00000559573	PLEKHG3	A1L390	1219 aa		14.15	□□□□□ -0.14
FAM227B-208	ENST00000559573	CHRNA2	Q15822	529 aa		14.15	□□□□□ -0.14
FAM227B-208	ENST00000559573	KIF1A	Q12756	1690 aa		14.14	□□□□□ -0.15
FAM227B-208	ENST00000559573	NGLY1	Q96IV0	654 aa		14.14	□□□□□ -0.15
FAM227B-208	ENST00000559573	TMF1	P82094	1093 aa		14.13	□□□□□ -0.15
FAM227B-208	ENST00000559573	NME9	Q86XW9	330 aa		14.13	□□□□□ -0.15
FAM227B-208	ENST00000559573	TNS3	Q68CZ2	1445 aa		14.13	□□□□□ -0.15
FAM227B-208	ENST00000559573	ITSN1	Q15811	1721 aa		14.13	□□□□□ -0.15
FAM227B-208	ENST00000559573	TRPM3	Q9HCF6	1732 aa	Predicted RBP	14.13	□□□□□ -0.15
FAM227B-208	ENST00000559573	SHPRH	Q149N8	1683 aa		14.13	□□□□□ -0.15
FAM227B-208	ENST00000559573	CD163L1	Q9NR16	1453 aa		14.13	□□□□□ -0.15
FAM227B-208	ENST00000559573	POLR3A	O14802	1390 aa	Predicted RBP	14.12	□□□□□ -0.15
FAM227B-208	ENST00000559573		A0A1W2PP64	1363 aa		14.12	□□□□□ -0.15
FAM227B-208	ENST00000559573	AFF2	P51816	1311 aa		14.12	□□□□□ -0.15
FAM227B-208	ENST00000559573	KTN1	Q86UP2	1357 aa	Known RBP	14.11	□□□□□ -0.15
FAM227B-208	ENST00000559573	NLRP6	P59044	892 aa		14.11	□□□□□ -0.15
FAM227B-208	ENST00000559573	FAM83G	A6ND36	823 aa		14.1	□□□□□ -0.15
FAM227B-208	ENST00000559573	USP6	P35125	1406 aa		14.1	□□□□□ -0.15
FAM227B-208	ENST00000559573	SPATA31A6	Q5VVP1	1343 aa		14.1	□□□□□ -0.15
FAM227B-208	ENST00000559573	SBNO2	Q9Y2G9	1366 aa		14.1	□□□□□ -0.15
FAM227B-208	ENST00000559573	CARD14	Q9BXL6	1004 aa		14.09	□□□□□ -0.15
FAM227B-208	ENST00000559573	ALS2	Q96Q42	1657 aa		14.09	□□□□□ -0.15
FAM227B-208	ENST00000559573	TTC21B	Q7Z4L5	1316 aa		14.08	□□□□□ -0.15
FAM227B-208	ENST00000559573	ATAD2	Q6PL18	1390 aa		14.08	□□□□□ -0.16
FAM227B-208	ENST00000559573	GGNBP2	Q9H3C7	697 aa		14.07	□□□□□ -0.16
FAM227B-208	ENST00000559573	SBNO1	A3KN83	1393 aa		14.07	□□□□□ -0.16
FAM227B-208	ENST00000559573	CPSF1	Q10570	1443 aa	Known RBP	14.06	□□□□□ -0.16
FAM227B-208	ENST00000559573	USP35	Q9P2H5	1018 aa		14.06	□□□□□ -0.16
FAM227B-208	ENST00000559573	KIAA0232	Q92628	1395 aa		14.06	□□□□□ -0.16
FAM227B-208	ENST00000559573	PIK3C2A	O00443	1686 aa		14.06	□□□□□ -0.16
FAM227B-208	ENST00000559573	USP21	Q9UK80	565 aa		14.06	□□□□□ -0.16
FAM227B-208	ENST00000559573	KIF7	Q2M1P5	1343 aa		14.06	□□□□□ -0.16
FAM227B-208	ENST00000559573	AKAP12	Q02952	1782 aa		14.05	□□□□□ -0.16
FAM227B-208	ENST00000559573	TNNT2	P45379	298 aa	Predicted RBP	14.05	□□□□□ -0.16
FAM227B-208	ENST00000559573	BTG4	Q9NY30	223 aa		14.05	□□□□□ -0.16
FAM227B-208	ENST00000559573	ABCA3	Q99758	1704 aa		14.05	□□□□□ -0.16
FAM227B-208	ENST00000559573	MYOM1	P52179	1685 aa		14.05	□□□□□ -0.16
FAM227B-208	ENST00000559573	GC	P02774	474 aa		14.05	□□□□□ -0.16
FAM227B-208	ENST00000559573	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	14.05	□□□□□ -0.16
FAM227B-208	ENST00000559573	QTRT2	Q9H974	415 aa	Known RBP	14.05	□□□□□ -0.16
FAM227B-208	ENST00000559573	STRN4	Q9NRL3	753 aa		14.05	□□□□□ -0.16
FAM227B-208	ENST00000559573	SSH2	Q76I76	1423 aa		14.04	□□□□□ -0.16
FAM227B-208	ENST00000559573	COL22A1	Q8NFW1	1626 aa	Predicted RBP	14.04	□□□□□ -0.16
FAM227B-208	ENST00000559573	PANK3	Q9H999	370 aa		14.03	□□□□□ -0.16
FAM227B-208	ENST00000559573	PRDM11	Q9NQV5	511 aa		14.03	□□□□□ -0.16
FAM227B-208	ENST00000559573	CCDC9	Q9Y3X0	531 aa	Known RBP	14.03	□□□□□ -0.16
FAM227B-208	ENST00000559573	GTF3C3	Q9Y5Q9	886 aa		14.03	□□□□□ -0.16
FAM227B-208	ENST00000559573	ARHGEF10	O15013	1369 aa		14.03	□□□□□ -0.16
FAM227B-208	ENST00000559573	CENPB	P07199	599 aa	Predicted RBP	14.03	□□□□□ -0.16
FAM227B-208	ENST00000559573	WASHC2A	Q641Q2	1341 aa		14.03	□□□□□ -0.16
FAM227B-208	ENST00000559573	AXIN2	Q9Y2T1	843 aa		14.03	□□□□□ -0.16
FAM227B-208	ENST00000559573	TERF2IP	Q9NYB0	399 aa		14.02	□□□□□ -0.16
FAM227B-208	ENST00000559573	ZNF692	Q9BU19	519 aa	Predicted RBP	14.02	□□□□□ -0.17
FAM227B-208	ENST00000559573	BCL9L	Q86UU0	1499 aa		14.01	□□□□□ -0.17
FAM227B-208	ENST00000559573	MON2	Q7Z3U7	1717 aa		14.01	□□□□□ -0.17
FAM227B-208	ENST00000559573	MARF1	Q9Y4F3	1742 aa	Known RBP	14.01	□□□□□ -0.17
FAM227B-208	ENST00000559573	NLRP13	Q86W25	1043 aa		14.01	□□□□□ -0.17
FAM227B-208	ENST00000559573	NRK	Q7Z2Y5	1582 aa		14.01	□□□□□ -0.17
FAM227B-208	ENST00000559573	CRYBG1	Q9Y4K1	1723 aa		14.01	□□□□□ -0.17
FAM227B-208	ENST00000559573	FYB1	O15117	783 aa		14	□□□□□ -0.17
FAM227B-208	ENST00000559573	RRS1	Q15050	365 aa	Known RBP	14	□□□□□ -0.17
FAM227B-208	ENST00000559573	PHRF1	Q9P1Y6	1649 aa	Known RBP	14	□□□□□ -0.17
FAM227B-208	ENST00000559573	FAM182B	Q5T319	152 aa		14	□□□□□ -0.17
FAM227B-208	ENST00000559573	NSD3	Q9BZ95	1437 aa		14	□□□□□ -0.17
FAM227B-208	ENST00000559573	ANKRD36B	Q8N2N9	1353 aa		13.99	□□□□□ -0.17
FAM227B-208	ENST00000559573	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.98	□□□□□ -0.17
FAM227B-208	ENST00000559573	LTV1	Q96GA3	475 aa	Predicted RBP	13.98	□□□□□ -0.17
FAM227B-208	ENST00000559573	RGPD5	Q99666	1765 aa		13.98	□□□□□ -0.17
FAM227B-208	ENST00000559573	LARP1	Q6PKG0	1096 aa	Known RBP	13.98	□□□□□ -0.17
FAM227B-208	ENST00000559573	PPM1G	O15355	546 aa	Predicted RBP	13.97	□□□□□ -0.17
FAM227B-208	ENST00000559573	USP19	O94966	1318 aa		13.97	□□□□□ -0.17
FAM227B-208	ENST00000559573	PLCH1	Q4KWH8	1693 aa		13.97	□□□□□ -0.17
FAM227B-208	ENST00000559573		A0A0G2JS52	829 aa		13.96	□□□□□ -0.17
FAM227B-208	ENST00000559573	UNC5CL	Q8IV45	518 aa		13.96	□□□□□ -0.17
FAM227B-208	ENST00000559573	EDC4	Q6P2E9	1401 aa	Known RBP	13.96	□□□□□ -0.17
FAM227B-208	ENST00000559573	RXRB	P28702	533 aa		13.96	□□□□□ -0.17
FAM227B-208	ENST00000559573	CDCA8	Q53HL2	280 aa		13.96	□□□□□ -0.17
FAM227B-208	ENST00000559573	CAMTA1	Q9Y6Y1	1673 aa		13.96	□□□□□ -0.17
FAM227B-208	ENST00000559573	FAM98C	Q17RN3	349 aa	Known RBP	13.95	□□□□□ -0.18
FAM227B-208	ENST00000559573	ZNF772	Q68DY9	489 aa	Predicted RBP	13.95	□□□□□ -0.18
FAM227B-208	ENST00000559573	CCDC7	Q96M83	1385 aa		13.95	□□□□□ -0.18
FAM227B-208	ENST00000559573	CC2D1B	Q5T0F9	858 aa	Known RBP	13.95	□□□□□ -0.18
FAM227B-208	ENST00000559573	SLIT2	O94813	1529 aa		13.95	□□□□□ -0.18
FAM227B-208	ENST00000559573	EVA1C	P58658	441 aa		13.94	□□□□□ -0.18
FAM227B-208	ENST00000559573	TTC21A	Q8NDW8	1320 aa		13.94	□□□□□ -0.18
FAM227B-208	ENST00000559573	COG3	Q96JB2	828 aa		13.94	□□□□□ -0.18
FAM227B-208	ENST00000559573	ARHGEF25	Q86VW2	580 aa		13.93	□□□□□ -0.18
FAM227B-208	ENST00000559573	GJD4	Q96KN9	370 aa	Predicted RBP	13.93	□□□□□ -0.18
FAM227B-208	ENST00000559573	PUS7	Q96PZ0	661 aa	Known RBP	13.93	□□□□□ -0.18
FAM227B-208	ENST00000559573	EMILIN1	Q9Y6C2	1016 aa		13.93	□□□□□ -0.18
FAM227B-208	ENST00000559573	TRPC5	Q9UL62	973 aa	Predicted RBP	13.92	□□□□□ -0.18
FAM227B-208	ENST00000559573	OVOS2	A0A0J9YW53	1432 aa		13.92	□□□□□ -0.18
FAM227B-208	ENST00000559573	OVOS2	Q6IE36	1432 aa		13.92	□□□□□ -0.18
FAM227B-208	ENST00000559573	MAP3K19	Q56UN5	1328 aa		13.91	□□□□□ -0.18
FAM227B-208	ENST00000559573	LTN1	O94822	1766 aa		13.91	□□□□□ -0.18
FAM227B-208	ENST00000559573	DDX10	Q13206	875 aa	Known RBP	13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms