RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 ALS2Q96Q42 1657 aa28.29■■■□□ 2.12
TSPAN3-207ENST00000559494 SSH2Q76I76 1423 aa28.28■■■□□ 2.12
TSPAN3-207ENST00000559494 CABLES1Q8TDN4 633 aa28.28■■■□□ 2.12
TSPAN3-207ENST00000559494 PLEKHG5O94827 1062 aa28.27■■■□□ 2.12
TSPAN3-207ENST00000559494 AKAP12Q02952 1782 aa28.27■■■□□ 2.12
TSPAN3-207ENST00000559494 BRD4O60885 1362 aaPredicted RBP28.27■■■□□ 2.12
TSPAN3-207ENST00000559494 HDGFL2Q7Z4V5 671 aaPredicted RBP28.26■■■□□ 2.11
TSPAN3-207ENST00000559494 KTN1Q86UP2 1357 aaKnown RBP28.26■■■□□ 2.11
TSPAN3-207ENST00000559494 NINLQ9Y2I6 1382 aa28.26■■■□□ 2.11
TSPAN3-207ENST00000559494 NUTM2GQ5VZR2 741 aa28.25■■■□□ 2.11
TSPAN3-207ENST00000559494 ABTB2Q8N961 1025 aa28.25■■■□□ 2.11
TSPAN3-207ENST00000559494 TERF2IPQ9NYB0 399 aa28.25■■■□□ 2.11
TSPAN3-207ENST00000559494 ADAMTS2O95450 1211 aa28.24■■■□□ 2.11
TSPAN3-207ENST00000559494 TTC21BQ7Z4L5 1316 aa28.24■■■□□ 2.11
TSPAN3-207ENST00000559494 MEX3CQ5U5Q3 659 aaKnown RBP28.23■■■□□ 2.11
TSPAN3-207ENST00000559494 POLR3GLQ9BT43 218 aa28.22■■■□□ 2.11
TSPAN3-207ENST00000559494 A0A1W2PP64 1363 aa28.22■■■□□ 2.11
TSPAN3-207ENST00000559494 ZEB1P37275 1124 aaPredicted RBP28.2■■■□□ 2.11
TSPAN3-207ENST00000559494 MON2Q7Z3U7 1717 aa28.19■■■□□ 2.1
TSPAN3-207ENST00000559494 RGS17Q9UGC6 210 aaPredicted RBP28.18■■■□□ 2.1
TSPAN3-207ENST00000559494 ANKRD36BQ8N2N9 1353 aa28.18■■■□□ 2.1
TSPAN3-207ENST00000559494 TTC21AQ8NDW8 1320 aa28.18■■■□□ 2.1
TSPAN3-207ENST00000559494 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.18■■■□□ 2.1
TSPAN3-207ENST00000559494 HAP1P54257 671 aaPredicted RBP28.17■■■□□ 2.1
TSPAN3-207ENST00000559494 NLRP6P59044 892 aa28.17■■■□□ 2.1
TSPAN3-207ENST00000559494 NLRP13Q86W25 1043 aa28.17■■■□□ 2.1
TSPAN3-207ENST00000559494 PHF23Q9BUL5 403 aaPredicted RBP28.17■■■□□ 2.1
TSPAN3-207ENST00000559494 C8orf37Q96NL8 207 aa28.16■■■□□ 2.1
TSPAN3-207ENST00000559494 EDC4Q6P2E9 1401 aaKnown RBP28.15■■■□□ 2.1
TSPAN3-207ENST00000559494 NRKQ7Z2Y5 1582 aa28.14■■■□□ 2.1
TSPAN3-207ENST00000559494 MYOM1P52179 1685 aa28.14■■■□□ 2.1
TSPAN3-207ENST00000559494 KIF7Q2M1P5 1343 aa28.14■■■□□ 2.1
TSPAN3-207ENST00000559494 NGLY1Q96IV0 654 aa28.14■■■□□ 2.09
TSPAN3-207ENST00000559494 ZRANB1Q9UGI0 708 aa28.14■■■□□ 2.09
TSPAN3-207ENST00000559494 USP19O94966 1318 aa28.13■■■□□ 2.09
TSPAN3-207ENST00000559494 NME9Q86XW9 330 aa28.13■■■□□ 2.09
TSPAN3-207ENST00000559494 CARD14Q9BXL6 1004 aa28.13■■■□□ 2.09
TSPAN3-207ENST00000559494 ABCA3Q99758 1704 aa28.12■■■□□ 2.09
TSPAN3-207ENST00000559494 CRYBG1Q9Y4K1 1723 aa28.12■■■□□ 2.09
TSPAN3-207ENST00000559494 PIK3C2AO00443 1686 aa28.11■■■□□ 2.09
TSPAN3-207ENST00000559494 AFF2P51816 1311 aa28.1■■■□□ 2.09
TSPAN3-207ENST00000559494 FAM83GA6ND36 823 aa28.09■■■□□ 2.09
TSPAN3-207ENST00000559494 GCP02774 474 aa28.09■■■□□ 2.09
TSPAN3-207ENST00000559494 MARF1Q9Y4F3 1742 aaKnown RBP28.09■■■□□ 2.09
TSPAN3-207ENST00000559494 FNBP4Q8N3X1 1017 aaPredicted RBP28.08■■■□□ 2.09
TSPAN3-207ENST00000559494 USP31Q70CQ4 1352 aa28.07■■■□□ 2.08
TSPAN3-207ENST00000559494 ZC3H6P61129 1189 aaKnown RBP28.06■■■□□ 2.08
TSPAN3-207ENST00000559494 PANK3Q9H999 370 aa28.06■■■□□ 2.08
TSPAN3-207ENST00000559494 POTEAQ6S8J7 498 aa28.05■■■□□ 2.08
TSPAN3-207ENST00000559494 ILDR2Q71H61 639 aa28.05■■■□□ 2.08
TSPAN3-207ENST00000559494 PHRF1Q9P1Y6 1649 aaKnown RBP28.05■■■□□ 2.08
TSPAN3-207ENST00000559494 WASHC2AQ641Q2 1341 aa28.05■■■□□ 2.08
TSPAN3-207ENST00000559494 CCDC7Q96M83 1385 aa28.04■■■□□ 2.08
TSPAN3-207ENST00000559494 FYB1O15117 783 aa28.03■■■□□ 2.08
TSPAN3-207ENST00000559494 ZNF772Q68DY9 489 aaPredicted RBP28.03■■■□□ 2.08
TSPAN3-207ENST00000559494 SLIT3O75094 1523 aa28.02■■■□□ 2.08
TSPAN3-207ENST00000559494 USP21Q9UK80 565 aa28.02■■■□□ 2.08
TSPAN3-207ENST00000559494 KIAA0232Q92628 1395 aa28.02■■■□□ 2.08
TSPAN3-207ENST00000559494 PRDM11Q9NQV5 511 aa28.01■■■□□ 2.07
TSPAN3-207ENST00000559494 NSD3Q9BZ95 1437 aa28.01■■■□□ 2.07
TSPAN3-207ENST00000559494 CHRNA2Q15822 529 aa27.99■■■□□ 2.07
TSPAN3-207ENST00000559494 KCNH5Q8NCM2 988 aa27.99■■■□□ 2.07
TSPAN3-207ENST00000559494 BCL9LQ86UU0 1499 aa27.99■■■□□ 2.07
TSPAN3-207ENST00000559494 SLIT2O94813 1529 aa27.99■■■□□ 2.07
TSPAN3-207ENST00000559494 SOX12O15370 315 aa27.98■■■□□ 2.07
TSPAN3-207ENST00000559494 GGNBP2Q9H3C7 697 aa27.98■■■□□ 2.07
TSPAN3-207ENST00000559494 CPDO75976 1380 aa27.97■■■□□ 2.07
TSPAN3-207ENST00000559494 QTRT2Q9H974 415 aaKnown RBP27.97■■■□□ 2.07
TSPAN3-207ENST00000559494 USP54Q70EL1 1684 aa27.97■■■□□ 2.07
TSPAN3-207ENST00000559494 OVOS2A0A0J9YW53 1432 aa27.96■■■□□ 2.07
TSPAN3-207ENST00000559494 OVOS2Q6IE36 1432 aa27.96■■■□□ 2.07
TSPAN3-207ENST00000559494 UNC5CLQ8IV45 518 aa27.96■■■□□ 2.07
TSPAN3-207ENST00000559494 COG3Q96JB2 828 aa27.96■■■□□ 2.07
TSPAN3-207ENST00000559494 BTG4Q9NY30 223 aa27.95■■■□□ 2.07
TSPAN3-207ENST00000559494 SOCS7O14512 581 aa27.94■■■□□ 2.06
TSPAN3-207ENST00000559494 ARHGEF25Q86VW2 580 aa27.94■■■□□ 2.06
TSPAN3-207ENST00000559494 COL14A1Q05707 1796 aaKnown RBP27.93■■■□□ 2.06
TSPAN3-207ENST00000559494 ZBTB7CA1YPR0 619 aa27.92■■■□□ 2.06
TSPAN3-207ENST00000559494 CGNL1Q0VF96 1302 aa27.92■■■□□ 2.06
TSPAN3-207ENST00000559494 NFAT5O94916 1531 aa27.92■■■□□ 2.06
TSPAN3-207ENST00000559494 TRPC5Q9UL62 973 aaPredicted RBP27.92■■■□□ 2.06
TSPAN3-207ENST00000559494 PLCH1Q4KWH8 1693 aa27.91■■■□□ 2.06
TSPAN3-207ENST00000559494 FBLN1P23142 703 aa27.91■■■□□ 2.06
TSPAN3-207ENST00000559494 NWD2Q9ULI1 1742 aa27.89■■■□□ 2.05
TSPAN3-207ENST00000559494 ATRNO75882 1429 aa27.89■■■□□ 2.05
TSPAN3-207ENST00000559494 AATKQ6ZMQ8 1374 aa27.88■■■□□ 2.05
TSPAN3-207ENST00000559494 KIF20BQ96Q89 1820 aa27.88■■■□□ 2.05
TSPAN3-207ENST00000559494 PER1O15534 1290 aaPredicted RBP27.88■■■□□ 2.05
TSPAN3-207ENST00000559494 CAMTA1Q9Y6Y1 1673 aa27.87■■■□□ 2.05
TSPAN3-207ENST00000559494 RXRBP28702 533 aa27.87■■■□□ 2.05
TSPAN3-207ENST00000559494 AXIN2Q9Y2T1 843 aa27.87■■■□□ 2.05
TSPAN3-207ENST00000559494 KNSTRNQ9Y448 316 aa27.87■■■□□ 2.05
TSPAN3-207ENST00000559494 VPS72Q15906 364 aa27.86■■■□□ 2.05
TSPAN3-207ENST00000559494 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.85■■■□□ 2.05
TSPAN3-207ENST00000559494 COL18A1P39060 1754 aa27.85■■■□□ 2.05
TSPAN3-207ENST00000559494 RBM6P78332 1123 aaKnown RBP27.85■■■□□ 2.05
TSPAN3-207ENST00000559494 LMO7Q8WWI1 1683 aa27.84■■■□□ 2.05
TSPAN3-207ENST00000559494 GJD4Q96KN9 370 aaPredicted RBP27.84■■■□□ 2.05
TSPAN3-207ENST00000559494 NRAPQ86VF7 1730 aa27.84■■■□□ 2.05
TSPAN3-207ENST00000559494 EVA1CP58658 441 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms