RNA–Protein interactions for RNA: ENST00000559488.5

ITGB3-201, Transcript of integrin subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB3, Length 3,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB3-201ENST00000559488 GBP4Q96PP9 640 aa17.78■□□□□ 0.44
ITGB3-201ENST00000559488 NGDNQ8NEJ9 315 aaKnown RBP17.77■□□□□ 0.44
ITGB3-201ENST00000559488 FCHSD2O94868 740 aa17.77■□□□□ 0.44
ITGB3-201ENST00000559488 CT47B1P0C2W7 299 aaPredicted RBP17.77■□□□□ 0.44
ITGB3-201ENST00000559488 NAP1L5Q96NT1 182 aaPredicted RBP17.77■□□□□ 0.44
ITGB3-201ENST00000559488 TRPM2O94759 1503 aa17.76■□□□□ 0.43
ITGB3-201ENST00000559488 HAP1P54257 671 aaPredicted RBP17.76■□□□□ 0.43
ITGB3-201ENST00000559488 ZCCHC11Q5TAX3 1644 aaKnown RBP17.76■□□□□ 0.43
ITGB3-201ENST00000559488 AMPHP49418 695 aa17.75■□□□□ 0.43
ITGB3-201ENST00000559488 PLXNC1O60486 1568 aa17.75■□□□□ 0.43
ITGB3-201ENST00000559488 API5Q9BZZ5 524 aaKnown RBP17.75■□□□□ 0.43
ITGB3-201ENST00000559488 A0A1W2PP64 1363 aa17.74■□□□□ 0.43
ITGB3-201ENST00000559488 SULT6B1Q6IMI4 303 aa17.74■□□□□ 0.43
ITGB3-201ENST00000559488 NOL8Q76FK4 1167 aaKnown RBP17.74■□□□□ 0.43
ITGB3-201ENST00000559488 CHD1LQ86WJ1 897 aa17.74■□□□□ 0.43
ITGB3-201ENST00000559488 ANO8Q9HCE9 1232 aaPredicted RBP17.74■□□□□ 0.43
ITGB3-201ENST00000559488 CCDC27Q2M243 656 aa17.73■□□□□ 0.43
ITGB3-201ENST00000559488 FOXD4L5Q5VV16 416 aaPredicted RBP17.73■□□□□ 0.43
ITGB3-201ENST00000559488 FOXD4L4Q8WXT5 416 aaPredicted RBP17.73■□□□□ 0.43
ITGB3-201ENST00000559488 TBC1D32Q96NH3 1257 aa17.73■□□□□ 0.43
ITGB3-201ENST00000559488 KDM5AP29375 1690 aaKnown RBP17.73■□□□□ 0.43
ITGB3-201ENST00000559488 NFE2L2Q16236 605 aa17.73■□□□□ 0.43
ITGB3-201ENST00000559488 NPATQ14207 1427 aa17.73■□□□□ 0.43
ITGB3-201ENST00000559488 ZRANB1Q9UGI0 708 aa17.72■□□□□ 0.43
ITGB3-201ENST00000559488 SYNMO15061 1565 aa17.72■□□□□ 0.43
ITGB3-201ENST00000559488 CLTCL1P53675 1640 aa17.72■□□□□ 0.43
ITGB3-201ENST00000559488 STK31Q9BXU1 1019 aa17.72■□□□□ 0.43
ITGB3-201ENST00000559488 FAM83GA6ND36 823 aa17.72■□□□□ 0.43
ITGB3-201ENST00000559488 NUTM2GQ5VZR2 741 aa17.71■□□□□ 0.43
ITGB3-201ENST00000559488 TRIM6-TRIM34B2RNG4 842 aa17.7■□□□□ 0.42
ITGB3-201ENST00000559488 TRAK2O60296 914 aa17.7■□□□□ 0.42
ITGB3-201ENST00000559488 ZFYVE16Q7Z3T8 1539 aa17.7■□□□□ 0.42
ITGB3-201ENST00000559488 NSD2O96028 1365 aa17.7■□□□□ 0.42
ITGB3-201ENST00000559488 NUDT16Q96DE0 195 aaKnown RBP17.7■□□□□ 0.42
ITGB3-201ENST00000559488 DDX11L8A8MPP1 907 aa17.69■□□□□ 0.42
ITGB3-201ENST00000559488 PHACTR3Q96KR7 559 aa17.69■□□□□ 0.42
ITGB3-201ENST00000559488 TRIM35Q9UPQ4 493 aa17.69■□□□□ 0.42
ITGB3-201ENST00000559488 MIS18AQ9NYP9 233 aa17.68■□□□□ 0.42
ITGB3-201ENST00000559488 NCKAP5LQ9HCH0 1330 aa17.68■□□□□ 0.42
ITGB3-201ENST00000559488 E9PCH4 1651 aa17.68■□□□□ 0.42
ITGB3-201ENST00000559488 HMMRO75330 724 aa17.68■□□□□ 0.42
ITGB3-201ENST00000559488 MCM4P33991 863 aa17.68■□□□□ 0.42
ITGB3-201ENST00000559488 OS9Q13438 667 aaPredicted RBP17.68■□□□□ 0.42
ITGB3-201ENST00000559488 MADDQ8WXG6 1647 aa17.67■□□□□ 0.42
ITGB3-201ENST00000559488 TSPYL6Q8N831 410 aa17.67■□□□□ 0.42
ITGB3-201ENST00000559488 MCM10Q7L590 875 aa17.67■□□□□ 0.42
ITGB3-201ENST00000559488 POLKQ9UBT6 870 aa17.67■□□□□ 0.42
ITGB3-201ENST00000559488 GCC1Q96CN9 775 aa17.66■□□□□ 0.42
ITGB3-201ENST00000559488 SLC26A8Q96RN1 970 aa17.66■□□□□ 0.42
ITGB3-201ENST00000559488 TSPYL4Q9UJ04 414 aa17.66■□□□□ 0.42
ITGB3-201ENST00000559488 CCDC61Q9Y6R9 512 aa17.66■□□□□ 0.42
ITGB3-201ENST00000559488 UHRF1BP1LA0JNW5 1464 aa17.66■□□□□ 0.42
ITGB3-201ENST00000559488 RILPL2Q969X0 211 aa17.66■□□□□ 0.42
ITGB3-201ENST00000559488 DDX49Q9Y6V7 483 aaKnown RBP17.66■□□□□ 0.42
ITGB3-201ENST00000559488 ABCC11Q96J66 1382 aa17.66■□□□□ 0.42
ITGB3-201ENST00000559488 FOXD4L6Q3SYB3 417 aaPredicted RBP17.65■□□□□ 0.42
ITGB3-201ENST00000559488 FOXD4L3Q6VB84 417 aaPredicted RBP17.65■□□□□ 0.42
ITGB3-201ENST00000559488 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.65■□□□□ 0.42
ITGB3-201ENST00000559488 EID1Q9Y6B2 187 aa17.65■□□□□ 0.42
ITGB3-201ENST00000559488 MBIPQ9NS73 344 aa17.65■□□□□ 0.42
ITGB3-201ENST00000559488 CDC45O75419 566 aa17.64■□□□□ 0.42
ITGB3-201ENST00000559488 ALDH1L2Q3SY69 923 aa17.64■□□□□ 0.42
ITGB3-201ENST00000559488 SBNO2Q9Y2G9 1366 aa17.64■□□□□ 0.41
ITGB3-201ENST00000559488 SLC4A2P04920 1241 aa17.64■□□□□ 0.41
ITGB3-201ENST00000559488 FKBP5Q13451 457 aaPredicted RBP17.64■□□□□ 0.41
ITGB3-201ENST00000559488 HDAC1Q13547 482 aaPredicted RBP17.63■□□□□ 0.41
ITGB3-201ENST00000559488 WASLO00401 505 aaPredicted RBP17.63■□□□□ 0.41
ITGB3-201ENST00000559488 ZBTB40Q9NUA8 1239 aa17.62■□□□□ 0.41
ITGB3-201ENST00000559488 SPHKAPQ2M3C7 1700 aa17.62■□□□□ 0.41
ITGB3-201ENST00000559488 CFAP44Q96MT7 982 aa17.62■□□□□ 0.41
ITGB3-201ENST00000559488 ST18O60284 1047 aa17.61■□□□□ 0.41
ITGB3-201ENST00000559488 C8orf58Q8NAV2 365 aa17.61■□□□□ 0.41
ITGB3-201ENST00000559488 TET3O43151 1660 aa17.61■□□□□ 0.41
ITGB3-201ENST00000559488 SMARCA5O60264 1052 aaPredicted RBP17.61■□□□□ 0.41
ITGB3-201ENST00000559488 EIF2S2P20042 333 aaKnown RBP17.61■□□□□ 0.41
ITGB3-201ENST00000559488 MYOM2P54296 1465 aa17.61■□□□□ 0.41
ITGB3-201ENST00000559488 MCCP23508 829 aa17.6■□□□□ 0.41
ITGB3-201ENST00000559488 IL16Q14005 1332 aa17.6■□□□□ 0.41
ITGB3-201ENST00000559488 KRT24Q2M2I5 525 aa17.6■□□□□ 0.41
ITGB3-201ENST00000559488 PUS7Q96PZ0 661 aaKnown RBP17.6■□□□□ 0.41
ITGB3-201ENST00000559488 IFT57Q9NWB7 429 aa17.6■□□□□ 0.41
ITGB3-201ENST00000559488 KIF1BO60333 1816 aa17.59■□□□□ 0.41
ITGB3-201ENST00000559488 NUCB1Q02818 461 aa17.59■□□□□ 0.41
ITGB3-201ENST00000559488 AEBP1Q8IUX7 1158 aa17.59■□□□□ 0.41
ITGB3-201ENST00000559488 ZNF428Q96B54 188 aa17.59■□□□□ 0.41
ITGB3-201ENST00000559488 NLRP6P59044 892 aa17.59■□□□□ 0.41
ITGB3-201ENST00000559488 INTS3Q68E01 1043 aaKnown RBP17.59■□□□□ 0.41
ITGB3-201ENST00000559488 MAP3K4Q9Y6R4 1608 aa17.58■□□□□ 0.41
ITGB3-201ENST00000559488 VAMP4O75379 141 aa17.58■□□□□ 0.41
ITGB3-201ENST00000559488 SMC5Q8IY18 1101 aa17.58■□□□□ 0.4
ITGB3-201ENST00000559488 RSPH6AQ9H0K4 717 aa17.57■□□□□ 0.4
ITGB3-201ENST00000559488 LAMC1P11047 1609 aa17.57■□□□□ 0.4
ITGB3-201ENST00000559488 POGZQ7Z3K3 1410 aa17.57■□□□□ 0.4
ITGB3-201ENST00000559488 YTHDC2Q9H6S0 1430 aaKnown RBP17.57■□□□□ 0.4
ITGB3-201ENST00000559488 PTMAP06454 111 aaKnown RBP17.57■□□□□ 0.4
ITGB3-201ENST00000559488 MCTP1Q6DN14 999 aa17.57■□□□□ 0.4
ITGB3-201ENST00000559488 RBM42Q9BTD8 480 aaKnown RBP17.57■□□□□ 0.4
ITGB3-201ENST00000559488 ZNF692Q9BU19 519 aaPredicted RBP17.57■□□□□ 0.4
ITGB3-201ENST00000559488 PLCB2Q00722 1185 aa17.57■□□□□ 0.4
ITGB3-201ENST00000559488 TBC1D9Q6ZT07 1266 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms