RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 TRAK2O60296 914 aa2.89□□□□□ -1.95
RGPD1-204ENST00000559485 MBD3O95983 291 aa2.89□□□□□ -1.95
RGPD1-204ENST00000559485 TDO2P48775 406 aa2.89□□□□□ -1.95
RGPD1-204ENST00000559485 MIPOL1Q8TD10 442 aa2.89□□□□□ -1.95
RGPD1-204ENST00000559485 EIF3JO75822 258 aaKnown RBP2.89□□□□□ -1.95
RGPD1-204ENST00000559485 KIAA1328Q86T90 577 aa2.89□□□□□ -1.95
RGPD1-204ENST00000559485 EIF4G3O43432 1585 aaKnown RBP2.89□□□□□ -1.95
RGPD1-204ENST00000559485 ARHGEF5Q12774 1597 aa2.89□□□□□ -1.95
RGPD1-204ENST00000559485 RAPGEF6Q8TEU7 1601 aa2.89□□□□□ -1.95
RGPD1-204ENST00000559485 GPRASP1Q5JY77 1395 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 VIRMAQ69YN4 1812 aaKnown RBP2.88□□□□□ -1.95
RGPD1-204ENST00000559485 IPO8O15397 1037 aaKnown RBP2.88□□□□□ -1.95
RGPD1-204ENST00000559485 TERF2IPQ9NYB0 399 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 TROQ12816 1431 aaPredicted RBP2.88□□□□□ -1.95
RGPD1-204ENST00000559485 ERBINQ96RT1 1412 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 CEP170Q5SW79 1584 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 UHRF1BP1LA0JNW5 1464 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 ABCC5O15440 1437 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 PTPRGP23470 1445 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 ANKRD50Q9ULJ7 1429 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 RASSF4Q9H2L5 321 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 PAXBP1Q9Y5B6 917 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 PLEKHH1Q9ULM0 1364 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 POTEB2H3BUK9 544 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 RGS3P49796 1198 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 SH3BGRP55822 239 aaPredicted RBP2.88□□□□□ -1.95
RGPD1-204ENST00000559485 TUBB4BP68371 445 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 NBPF20Q3BBV1 942 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 BSDC1Q9NW68 430 aaPredicted RBP2.88□□□□□ -1.95
RGPD1-204ENST00000559485 ERCC3P19447 782 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 MCM4P33991 863 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 CCDC38Q502W7 563 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 TTLL5Q6EMB2 1281 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 KRT222Q8N1A0 295 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 CLUAP1Q96AJ1 413 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 FAM210AQ96ND0 272 aa2.88□□□□□ -1.95
RGPD1-204ENST00000559485 CWC22Q9HCG8 908 aaKnown RBP2.88□□□□□ -1.95
RGPD1-204ENST00000559485 GOLGA6L10A6NI86 522 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 TMCO5BA8MYB1 307 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 FMNL3Q8IVF7 1028 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 RAI14Q9P0K7 980 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 PTPRKQ15262 1439 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 PRDM15P57071 1507 aaPredicted RBP2.87□□□□□ -1.95
RGPD1-204ENST00000559485 URB2Q14146 1524 aaKnown RBP2.87□□□□□ -1.95
RGPD1-204ENST00000559485 ASXL1Q8IXJ9 1541 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 CCDC196A0A1B0GTZ2 297 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 ZNF500O60304 480 aaPredicted RBP2.87□□□□□ -1.95
RGPD1-204ENST00000559485 NEMFO60524 1076 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.87□□□□□ -1.95
RGPD1-204ENST00000559485 SNX21Q969T3 373 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.87□□□□□ -1.95
RGPD1-204ENST00000559485 CDK13Q14004 1512 aaKnown RBP2.87□□□□□ -1.95
RGPD1-204ENST00000559485 ADAMTS12P58397 1594 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 H0YHG0 523 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 FRAT2O75474 233 aaPredicted RBP2.87□□□□□ -1.95
RGPD1-204ENST00000559485 HDAC1Q13547 482 aaPredicted RBP2.87□□□□□ -1.95
RGPD1-204ENST00000559485 ZRSR2Q15696 482 aaKnown RBP2.87□□□□□ -1.95
RGPD1-204ENST00000559485 TTC31Q49AM3 519 aaPredicted RBP2.87□□□□□ -1.95
RGPD1-204ENST00000559485 NBPF6Q5VWK0 638 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 NBPF5PQ86XG9 351 aaPredicted RBP2.87□□□□□ -1.95
RGPD1-204ENST00000559485 CCDC50Q8IVM0 306 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 ZNF526Q8TF50 670 aaPredicted RBP2.87□□□□□ -1.95
RGPD1-204ENST00000559485 NBPF4Q96M43 638 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 TSPY26PQ9H489 355 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 INCENPQ9NQS7 918 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 ATP6V1DQ9Y5K8 247 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 PZPP20742 1482 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 BANK1Q8NDB2 785 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 NOL10Q9BSC4 688 aaKnown RBP2.87□□□□□ -1.95
RGPD1-204ENST00000559485 SMC4Q9NTJ3 1288 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 NUP155O75694 1391 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 KANK1Q14678 1352 aa2.87□□□□□ -1.95
RGPD1-204ENST00000559485 GBP2P32456 591 aaPredicted RBP2.86□□□□□ -1.95
RGPD1-204ENST00000559485 KCNJ4P48050 445 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 BMS1Q14692 1282 aaKnown RBP2.86□□□□□ -1.95
RGPD1-204ENST00000559485 C8orf34Q49A92 452 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 MICALCLQ6ZW33 695 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 MYRIPQ8NFW9 859 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 ZNF428Q96B54 188 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 DDX19BQ9UMR2 479 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 NSD2O96028 1365 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 KIAA0556O60303 1618 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 PBRM1Q86U86 1689 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 FSD2A1L4K1 749 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 GOLGA6L9A6NEM1 432 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 TTC36A6NLP5 189 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 MCM3P25205 808 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 MCM2P49736 904 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 LRCH2Q5VUJ6 765 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 C9orf84Q5VXU9 1444 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 WDR63Q8IWG1 891 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 KIAA0586Q9BVV6 1533 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 MYO6Q9UM54 1294 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 MAST1Q9Y2H9 1570 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 ADGRL1O94910 1474 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 ST18O60284 1047 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 PRPF40AO75400 957 aaKnown RBP2.86□□□□□ -1.95
RGPD1-204ENST00000559485 CCDC70Q6NSX1 233 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 ERC1Q8IUD2 1116 aa2.86□□□□□ -1.95
RGPD1-204ENST00000559485 GPATCH11Q8N954 259 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms