RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.83■□□□□ 0.93
USP8-208ENST00000559329 RRP7AQ9Y3A4 280 aaKnown RBP20.83■□□□□ 0.93
USP8-208ENST00000559329 PLEKHF1Q96S99 279 aa20.82■□□□□ 0.92
USP8-208ENST00000559329 NUDT16Q96DE0 195 aaKnown RBP20.82■□□□□ 0.92
USP8-208ENST00000559329 FANCIQ9NVI1 1328 aa20.81■□□□□ 0.92
USP8-208ENST00000559329 TOPAZ1Q8N9V7 1692 aa20.81■□□□□ 0.92
USP8-208ENST00000559329 CCDC61Q9Y6R9 512 aa20.8■□□□□ 0.92
USP8-208ENST00000559329 ITSN1Q15811 1721 aa20.8■□□□□ 0.92
USP8-208ENST00000559329 PTPRUQ92729 1446 aa20.8■□□□□ 0.92
USP8-208ENST00000559329 NEUROD2Q15784 382 aa20.79■□□□□ 0.92
USP8-208ENST00000559329 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.79■□□□□ 0.92
USP8-208ENST00000559329 PRR36Q9H6K5 1346 aa20.79■□□□□ 0.92
USP8-208ENST00000559329 DIP2AQ14689 1571 aa20.77■□□□□ 0.92
USP8-208ENST00000559329 BCAR3O75815 825 aa20.77■□□□□ 0.92
USP8-208ENST00000559329 POLKQ9UBT6 870 aa20.77■□□□□ 0.92
USP8-208ENST00000559329 NRKQ7Z2Y5 1582 aa20.77■□□□□ 0.91
USP8-208ENST00000559329 DIAPH1O60610 1272 aaKnown RBP20.76■□□□□ 0.91
USP8-208ENST00000559329 AATKQ6ZMQ8 1374 aa20.76■□□□□ 0.91
USP8-208ENST00000559329 NCKAP5LQ9HCH0 1330 aa20.76■□□□□ 0.91
USP8-208ENST00000559329 EID1Q9Y6B2 187 aa20.76■□□□□ 0.91
USP8-208ENST00000559329 MAP2P11137 1827 aaKnown RBP20.75■□□□□ 0.91
USP8-208ENST00000559329 U2SURPO15042 1029 aaKnown RBP20.75■□□□□ 0.91
USP8-208ENST00000559329 PTCH1Q13635 1447 aa20.75■□□□□ 0.91
USP8-208ENST00000559329 CDK12Q9NYV4 1490 aaPredicted RBP20.74■□□□□ 0.91
USP8-208ENST00000559329 KDM2BQ8NHM5 1336 aa20.74■□□□□ 0.91
USP8-208ENST00000559329 LRRC7Q96NW7 1537 aa20.74■□□□□ 0.91
USP8-208ENST00000559329 TMPOP42166 694 aaKnown RBP20.73■□□□□ 0.91
USP8-208ENST00000559329 NME9Q86XW9 330 aa20.73■□□□□ 0.91
USP8-208ENST00000559329 TBX22Q9Y458 520 aa20.73■□□□□ 0.91
USP8-208ENST00000559329 ZNF692Q9BU19 519 aaPredicted RBP20.72■□□□□ 0.91
USP8-208ENST00000559329 SLC26A8Q96RN1 970 aa20.71■□□□□ 0.91
USP8-208ENST00000559329 MYH16Q9H6N6 1097 aa20.71■□□□□ 0.91
USP8-208ENST00000559329 TRIM35Q9UPQ4 493 aa20.71■□□□□ 0.91
USP8-208ENST00000559329 XRN1Q8IZH2 1706 aaKnown RBP20.71■□□□□ 0.91
USP8-208ENST00000559329 TRHP20396 242 aaPredicted RBP20.7■□□□□ 0.91
USP8-208ENST00000559329 PDE3AQ14432 1141 aa20.7■□□□□ 0.91
USP8-208ENST00000559329 THEMISQ8N1K5 641 aaPredicted RBP20.7■□□□□ 0.91
USP8-208ENST00000559329 TCERG1O14776 1098 aaKnown RBP20.7■□□□□ 0.9
USP8-208ENST00000559329 FBLN1P23142 703 aa20.7■□□□□ 0.9
USP8-208ENST00000559329 RARSP54136 660 aaKnown RBP20.7■□□□□ 0.9
USP8-208ENST00000559329 MAPK8IP3Q9UPT6 1336 aa20.69■□□□□ 0.9
USP8-208ENST00000559329 PLEKHG3A1L390 1219 aa20.69■□□□□ 0.9
USP8-208ENST00000559329 FCHSD2O94868 740 aa20.69■□□□□ 0.9
USP8-208ENST00000559329 PNNQ9H307 717 aaKnown RBP20.69■□□□□ 0.9
USP8-208ENST00000559329 ZRANB1Q9UGI0 708 aa20.69■□□□□ 0.9
USP8-208ENST00000559329 CEP170BQ9Y4F5 1589 aaPredicted RBP20.69■□□□□ 0.9
USP8-208ENST00000559329 IL16Q14005 1332 aa20.68■□□□□ 0.9
USP8-208ENST00000559329 RSPH6AQ9H0K4 717 aa20.68■□□□□ 0.9
USP8-208ENST00000559329 AMOTL2Q9Y2J4 779 aa20.67■□□□□ 0.9
USP8-208ENST00000559329 EMILIN1Q9Y6C2 1016 aa20.67■□□□□ 0.9
USP8-208ENST00000559329 COG3Q96JB2 828 aa20.66■□□□□ 0.9
USP8-208ENST00000559329 MS4A1P11836 297 aa20.66■□□□□ 0.9
USP8-208ENST00000559329 CENPQQ7L2Z9 268 aaPredicted RBP20.66■□□□□ 0.9
USP8-208ENST00000559329 NALCNQ8IZF0 1738 aa20.65■□□□□ 0.9
USP8-208ENST00000559329 OVOS2A0A0J9YW53 1432 aa20.65■□□□□ 0.9
USP8-208ENST00000559329 USP6P35125 1406 aa20.65■□□□□ 0.9
USP8-208ENST00000559329 OVOS2Q6IE36 1432 aa20.65■□□□□ 0.9
USP8-208ENST00000559329 SSH2Q76I76 1423 aa20.65■□□□□ 0.9
USP8-208ENST00000559329 IL13P35225 146 aa20.65■□□□□ 0.9
USP8-208ENST00000559329 RIMS1Q86UR5 1692 aaKnown RBP20.65■□□□□ 0.9
USP8-208ENST00000559329 MSH5O43196 834 aa20.65■□□□□ 0.9
USP8-208ENST00000559329 CT47B1P0C2W7 299 aaPredicted RBP20.65■□□□□ 0.9
USP8-208ENST00000559329 ACEP12821 1306 aa20.64■□□□□ 0.89
USP8-208ENST00000559329 TTC21BQ7Z4L5 1316 aa20.64■□□□□ 0.89
USP8-208ENST00000559329 PPM1GO15355 546 aaPredicted RBP20.63■□□□□ 0.89
USP8-208ENST00000559329 RIPK4P57078 832 aa20.63■□□□□ 0.89
USP8-208ENST00000559329 PLPPR3Q6T4P5 718 aa20.63■□□□□ 0.89
USP8-208ENST00000559329 ZNF142P52746 1687 aaPredicted RBP20.62■□□□□ 0.89
USP8-208ENST00000559329 PRKAR2BP31323 418 aa20.62■□□□□ 0.89
USP8-208ENST00000559329 PIK3R4Q99570 1358 aa20.62■□□□□ 0.89
USP8-208ENST00000559329 TSR2Q969E8 191 aaKnown RBP20.6■□□□□ 0.89
USP8-208ENST00000559329 ADAMTSL3P82987 1691 aa20.6■□□□□ 0.89
USP8-208ENST00000559329 PANK1Q8TE04 598 aa20.59■□□□□ 0.89
USP8-208ENST00000559329 USP31Q70CQ4 1352 aa20.59■□□□□ 0.89
USP8-208ENST00000559329 CANXP27824 592 aaKnown RBP20.59■□□□□ 0.89
USP8-208ENST00000559329 RRS1Q15050 365 aaKnown RBP20.59■□□□□ 0.89
USP8-208ENST00000559329 PHACTR3Q96KR7 559 aa20.57■□□□□ 0.88
USP8-208ENST00000559329 EXOSC9Q06265 439 aaKnown RBP20.57■□□□□ 0.88
USP8-208ENST00000559329 NFE2L2Q16236 605 aa20.57■□□□□ 0.88
USP8-208ENST00000559329 FRAT1Q92837 279 aaPredicted RBP20.57■□□□□ 0.88
USP8-208ENST00000559329 COG6Q9Y2V7 657 aa20.57■□□□□ 0.88
USP8-208ENST00000559329 ANKARQ7Z5J8 1434 aa20.56■□□□□ 0.88
USP8-208ENST00000559329 RGPD8O14715 1765 aaPredicted RBP20.56■□□□□ 0.88
USP8-208ENST00000559329 NUTM2FA1L443 756 aa20.56■□□□□ 0.88
USP8-208ENST00000559329 HMOX1P09601 288 aa20.56■□□□□ 0.88
USP8-208ENST00000559329 AAMPQ13685 434 aa20.56■□□□□ 0.88
USP8-208ENST00000559329 SKAP1Q86WV1 359 aa20.56■□□□□ 0.88
USP8-208ENST00000559329 PEAK1Q9H792 1746 aa20.56■□□□□ 0.88
USP8-208ENST00000559329 PDE4AP27815 886 aa20.55■□□□□ 0.88
USP8-208ENST00000559329 CLUAP1Q96AJ1 413 aa20.55■□□□□ 0.88
USP8-208ENST00000559329 BACH2Q9BYV9 841 aa20.55■□□□□ 0.88
USP8-208ENST00000559329 FMN2Q9NZ56 1722 aa20.55■□□□□ 0.88
USP8-208ENST00000559329 RLBP1P12271 317 aa20.55■□□□□ 0.88
USP8-208ENST00000559329 BCL2L13Q9BXK5 485 aa20.55■□□□□ 0.88
USP8-208ENST00000559329 TTC21AQ8NDW8 1320 aa20.54■□□□□ 0.88
USP8-208ENST00000559329 NEFMP07197 916 aa20.54■□□□□ 0.88
USP8-208ENST00000559329 TNNQ9UQP3 1299 aa20.53■□□□□ 0.88
USP8-208ENST00000559329 RGPD1P0DJD0 1748 aa20.53■□□□□ 0.88
USP8-208ENST00000559329 KCNA6P17658 529 aa20.53■□□□□ 0.88
USP8-208ENST00000559329 CHD2O14647 1828 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms