RNA–Protein interactions for RNA: ENST00000559289.1

SHC4-206, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-206ENST00000559289 ALS2Q96Q42 1657 aa8.26□□□□□ -1.09
SHC4-206ENST00000559289 ANKRD36BQ8N2N9 1353 aa8.25□□□□□ -1.09
SHC4-206ENST00000559289 TMC1Q8TDI8 760 aa8.25□□□□□ -1.09
SHC4-206ENST00000559289 POLR3GLQ9BT43 218 aa8.25□□□□□ -1.09
SHC4-206ENST00000559289 USP6P35125 1406 aa8.25□□□□□ -1.09
SHC4-206ENST00000559289 MARF1Q9Y4F3 1742 aaKnown RBP8.25□□□□□ -1.09
SHC4-206ENST00000559289 SOS2Q07890 1332 aaPredicted RBP8.25□□□□□ -1.09
SHC4-206ENST00000559289 PIK3C2AO00443 1686 aa8.24□□□□□ -1.09
SHC4-206ENST00000559289 CARD14Q9BXL6 1004 aa8.24□□□□□ -1.09
SHC4-206ENST00000559289 NPHP3Q7Z494 1330 aa8.24□□□□□ -1.09
SHC4-206ENST00000559289 USP54Q70EL1 1684 aa8.24□□□□□ -1.09
SHC4-206ENST00000559289 CRYBG1Q9Y4K1 1723 aa8.23□□□□□ -1.09
SHC4-206ENST00000559289 XPCQ01831 940 aaPredicted RBP8.23□□□□□ -1.09
SHC4-206ENST00000559289 NGDNQ8NEJ9 315 aaKnown RBP8.23□□□□□ -1.09
SHC4-206ENST00000559289 KTN1Q86UP2 1357 aaKnown RBP8.22□□□□□ -1.09
SHC4-206ENST00000559289 KIF20BQ96Q89 1820 aa8.22□□□□□ -1.09
SHC4-206ENST00000559289 EDC4Q6P2E9 1401 aaKnown RBP8.22□□□□□ -1.09
SHC4-206ENST00000559289 NSD3Q9BZ95 1437 aa8.22□□□□□ -1.09
SHC4-206ENST00000559289 PER1O15534 1290 aaPredicted RBP8.22□□□□□ -1.09
SHC4-206ENST00000559289 KRT28Q7Z3Y7 464 aa8.22□□□□□ -1.09
SHC4-206ENST00000559289 FBXO41Q8TF61 875 aa8.22□□□□□ -1.09
SHC4-206ENST00000559289 PANK3Q9H999 370 aa8.22□□□□□ -1.09
SHC4-206ENST00000559289 SBNO1A3KN83 1393 aa8.22□□□□□ -1.09
SHC4-206ENST00000559289 COL22A1Q8NFW1 1626 aaPredicted RBP8.21□□□□□ -1.09
SHC4-206ENST00000559289 TNS3Q68CZ2 1445 aa8.21□□□□□ -1.09
SHC4-206ENST00000559289 SHPRHQ149N8 1683 aa8.21□□□□□ -1.09
SHC4-206ENST00000559289 ABCA3Q99758 1704 aa8.21□□□□□ -1.09
SHC4-206ENST00000559289 ANKRD26Q9UPS8 1709 aa8.21□□□□□ -1.09
SHC4-206ENST00000559289 PSME1Q06323 249 aa8.21□□□□□ -1.1
SHC4-206ENST00000559289 HDGFL2Q7Z4V5 671 aaPredicted RBP8.21□□□□□ -1.1
SHC4-206ENST00000559289 ZNF692Q9BU19 519 aaPredicted RBP8.21□□□□□ -1.1
SHC4-206ENST00000559289 TERF2IPQ9NYB0 399 aa8.21□□□□□ -1.1
SHC4-206ENST00000559289 SPATA31A3Q5VYP0 1347 aa8.21□□□□□ -1.1
SHC4-206ENST00000559289 TTC21BQ7Z4L5 1316 aa8.21□□□□□ -1.1
SHC4-206ENST00000559289 BRD4O60885 1362 aaPredicted RBP8.21□□□□□ -1.1
SHC4-206ENST00000559289 MED1Q15648 1581 aaPredicted RBP8.2□□□□□ -1.1
SHC4-206ENST00000559289 HSPA1LP34931 641 aa8.2□□□□□ -1.1
SHC4-206ENST00000559289 DDX10Q13206 875 aaKnown RBP8.2□□□□□ -1.1
SHC4-206ENST00000559289 PHRF1Q9P1Y6 1649 aaKnown RBP8.2□□□□□ -1.1
SHC4-206ENST00000559289 AMER1Q5JTC6 1135 aaPredicted RBP8.19□□□□□ -1.1
SHC4-206ENST00000559289 ZRANB1Q9UGI0 708 aa8.19□□□□□ -1.1
SHC4-206ENST00000559289 TTC21AQ8NDW8 1320 aa8.19□□□□□ -1.1
SHC4-206ENST00000559289 PNPLA6Q8IY17 1366 aa8.19□□□□□ -1.1
SHC4-206ENST00000559289 OVOS2A0A0J9YW53 1432 aa8.19□□□□□ -1.1
SHC4-206ENST00000559289 OVOS2Q6IE36 1432 aa8.19□□□□□ -1.1
SHC4-206ENST00000559289 FYB1O15117 783 aa8.18□□□□□ -1.1
SHC4-206ENST00000559289 NME9Q86XW9 330 aa8.18□□□□□ -1.1
SHC4-206ENST00000559289 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.18□□□□□ -1.1
SHC4-206ENST00000559289 USP31Q70CQ4 1352 aa8.18□□□□□ -1.1
SHC4-206ENST00000559289 SLIT3O75094 1523 aa8.18□□□□□ -1.1
SHC4-206ENST00000559289 PAK3O75914 559 aaPredicted RBP8.17□□□□□ -1.1
SHC4-206ENST00000559289 SP7Q8TDD2 431 aaPredicted RBP8.17□□□□□ -1.1
SHC4-206ENST00000559289 LRRC59Q96AG4 307 aaKnown RBP8.17□□□□□ -1.1
SHC4-206ENST00000559289 USP19O94966 1318 aa8.17□□□□□ -1.1
SHC4-206ENST00000559289 NFAT5O94916 1531 aa8.17□□□□□ -1.1
SHC4-206ENST00000559289 ARHGEF10O15013 1369 aa8.16□□□□□ -1.1
SHC4-206ENST00000559289 NUTM2GQ5VZR2 741 aa8.16□□□□□ -1.1
SHC4-206ENST00000559289 ABTB2Q8N961 1025 aa8.16□□□□□ -1.1
SHC4-206ENST00000559289 GGNBP2Q9H3C7 697 aa8.16□□□□□ -1.1
SHC4-206ENST00000559289 JCADQ9P266 1359 aa8.16□□□□□ -1.1
SHC4-206ENST00000559289 NPC1L1Q9UHC9 1359 aa8.16□□□□□ -1.1
SHC4-206ENST00000559289 LRP6O75581 1613 aa8.15□□□□□ -1.1
SHC4-206ENST00000559289 CGNL1Q0VF96 1302 aa8.15□□□□□ -1.1
SHC4-206ENST00000559289 CABLES1Q8TDN4 633 aa8.15□□□□□ -1.1
SHC4-206ENST00000559289 SPINK5Q9NQ38 1064 aaPredicted RBP8.15□□□□□ -1.1
SHC4-206ENST00000559289 KNSTRNQ9Y448 316 aa8.15□□□□□ -1.1
SHC4-206ENST00000559289 LTN1O94822 1766 aa8.15□□□□□ -1.11
SHC4-206ENST00000559289 COL18A1P39060 1754 aa8.15□□□□□ -1.11
SHC4-206ENST00000559289 NSD2O96028 1365 aa8.14□□□□□ -1.11
SHC4-206ENST00000559289 FBLN1P23142 703 aa8.14□□□□□ -1.11
SHC4-206ENST00000559289 NLRP6P59044 892 aa8.14□□□□□ -1.11
SHC4-206ENST00000559289 LMOD2Q6P5Q4 547 aa8.14□□□□□ -1.11
SHC4-206ENST00000559289 ILDR1Q86SU0 546 aaPredicted RBP8.14□□□□□ -1.11
SHC4-206ENST00000559289 MAP2P11137 1827 aaKnown RBP8.14□□□□□ -1.11
SHC4-206ENST00000559289 PEAK1Q9H792 1746 aa8.14□□□□□ -1.11
SHC4-206ENST00000559289 CC2D1BQ5T0F9 858 aaKnown RBP8.13□□□□□ -1.11
SHC4-206ENST00000559289 NLRP13Q86W25 1043 aa8.13□□□□□ -1.11
SHC4-206ENST00000559289 LMO7Q8WWI1 1683 aa8.13□□□□□ -1.11
SHC4-206ENST00000559289 RGPD5Q99666 1765 aa8.12□□□□□ -1.11
SHC4-206ENST00000559289 SPATA31A6Q5VVP1 1343 aa8.12□□□□□ -1.11
SHC4-206ENST00000559289 PLEKHG5O94827 1062 aa8.12□□□□□ -1.11
SHC4-206ENST00000559289 GCP02774 474 aa8.12□□□□□ -1.11
SHC4-206ENST00000559289 COG3Q96JB2 828 aa8.12□□□□□ -1.11
SHC4-206ENST00000559289 PARD3Q8TEW0 1356 aa8.11□□□□□ -1.11
SHC4-206ENST00000559289 PLCH1Q4KWH8 1693 aa8.11□□□□□ -1.11
SHC4-206ENST00000559289 CPDO75976 1380 aa8.1□□□□□ -1.11
SHC4-206ENST00000559289 AATKQ6ZMQ8 1374 aa8.1□□□□□ -1.11
SHC4-206ENST00000559289 COL14A1Q05707 1796 aaKnown RBP8.1□□□□□ -1.11
SHC4-206ENST00000559289 NRAPQ86VF7 1730 aa8.1□□□□□ -1.11
SHC4-206ENST00000559289 ZC3H6P61129 1189 aaKnown RBP8.1□□□□□ -1.11
SHC4-206ENST00000559289 CNGB1Q14028 1251 aaPredicted RBP8.1□□□□□ -1.11
SHC4-206ENST00000559289 ARHGEF25Q86VW2 580 aa8.1□□□□□ -1.11
SHC4-206ENST00000559289 SMG6Q86US8 1419 aaKnown RBP8.1□□□□□ -1.11
SHC4-206ENST00000559289 KIAA0232Q92628 1395 aa8.1□□□□□ -1.11
SHC4-206ENST00000559289 ABCC6O95255 1503 aa8.09□□□□□ -1.11
SHC4-206ENST00000559289 MAP3K19Q56UN5 1328 aa8.09□□□□□ -1.11
SHC4-206ENST00000559289 CAMTA1Q9Y6Y1 1673 aa8.09□□□□□ -1.11
SHC4-206ENST00000559289 NUTM2BA6NNL0 878 aaPredicted RBP8.09□□□□□ -1.11
SHC4-206ENST00000559289 NUTM2EB1AL46 878 aaPredicted RBP8.09□□□□□ -1.11
SHC4-206ENST00000559289 SOX12O15370 315 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms