RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 GLIPR1L2Q4G1C9 344 aa17.26■□□□□ 0.35
CPNE6-210ENST00000558995 RRP7AQ9Y3A4 280 aaKnown RBP17.26■□□□□ 0.35
CPNE6-210ENST00000558995 PPM1GO15355 546 aaPredicted RBP17.26■□□□□ 0.35
CPNE6-210ENST00000558995 CANXP27824 592 aaKnown RBP17.26■□□□□ 0.35
CPNE6-210ENST00000558995 VSIG10Q8N0Z9 540 aa17.25■□□□□ 0.35
CPNE6-210ENST00000558995 USP35Q9P2H5 1018 aa17.25■□□□□ 0.35
CPNE6-210ENST00000558995 NRXN3Q9Y4C0 1643 aa17.25■□□□□ 0.35
CPNE6-210ENST00000558995 SETD1AO15047 1707 aaKnown RBP17.25■□□□□ 0.35
CPNE6-210ENST00000558995 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.25■□□□□ 0.35
CPNE6-210ENST00000558995 ATAD2Q6PL18 1390 aa17.25■□□□□ 0.35
CPNE6-210ENST00000558995 RGS3P49796 1198 aa17.24■□□□□ 0.35
CPNE6-210ENST00000558995 RARSP54136 660 aaKnown RBP17.24■□□□□ 0.35
CPNE6-210ENST00000558995 CLUAP1Q96AJ1 413 aa17.24■□□□□ 0.35
CPNE6-210ENST00000558995 IGHDP01880 384 aa17.24■□□□□ 0.35
CPNE6-210ENST00000558995 TXNDC2Q86VQ3 553 aa17.24■□□□□ 0.35
CPNE6-210ENST00000558995 LAS1LQ9Y4W2 734 aaKnown RBP17.24■□□□□ 0.35
CPNE6-210ENST00000558995 GGNBP2Q9H3C7 697 aa17.23■□□□□ 0.35
CPNE6-210ENST00000558995 CABP1Q9NZU7 370 aa17.23■□□□□ 0.35
CPNE6-210ENST00000558995 AAMPQ13685 434 aa17.23■□□□□ 0.35
CPNE6-210ENST00000558995 PANK1Q8TE04 598 aa17.23■□□□□ 0.35
CPNE6-210ENST00000558995 TMEM2Q9UHN6 1383 aa17.23■□□□□ 0.35
CPNE6-210ENST00000558995 COG6Q9Y2V7 657 aa17.23■□□□□ 0.35
CPNE6-210ENST00000558995 ABCC11Q96J66 1382 aa17.23■□□□□ 0.35
CPNE6-210ENST00000558995 CD163L1Q9NR16 1453 aa17.22■□□□□ 0.35
CPNE6-210ENST00000558995 NEFMP07197 916 aa17.21■□□□□ 0.35
CPNE6-210ENST00000558995 U2AF1L5P0DN76 240 aaPredicted RBP17.21■□□□□ 0.35
CPNE6-210ENST00000558995 U2AF1Q01081 240 aaKnown RBP eCLIP17.21■□□□□ 0.35
CPNE6-210ENST00000558995 FRAT1Q92837 279 aaPredicted RBP17.21■□□□□ 0.35
CPNE6-210ENST00000558995 TERF2IPQ9NYB0 399 aa17.21■□□□□ 0.35
CPNE6-210ENST00000558995 LTKP29376 864 aa17.2■□□□□ 0.34
CPNE6-210ENST00000558995 MYH16Q9H6N6 1097 aa17.2■□□□□ 0.34
CPNE6-210ENST00000558995 DLC1Q96QB1 1528 aa17.2■□□□□ 0.34
CPNE6-210ENST00000558995 HDGFP51858 240 aaKnown RBP17.19■□□□□ 0.34
CPNE6-210ENST00000558995 UBR1Q8IWV7 1749 aa17.19■□□□□ 0.34
CPNE6-210ENST00000558995 FYB1O15117 783 aa17.19■□□□□ 0.34
CPNE6-210ENST00000558995 MAPK8IP3Q9UPT6 1336 aa17.18■□□□□ 0.34
CPNE6-210ENST00000558995 HDGFL2Q7Z4V5 671 aaPredicted RBP17.17■□□□□ 0.34
CPNE6-210ENST00000558995 PMFBP1Q8TBY8 1022 aa17.17■□□□□ 0.34
CPNE6-210ENST00000558995 NCKAP5LQ9HCH0 1330 aa17.16■□□□□ 0.34
CPNE6-210ENST00000558995 WASLO00401 505 aaPredicted RBP17.15■□□□□ 0.34
CPNE6-210ENST00000558995 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.15■□□□□ 0.34
CPNE6-210ENST00000558995 BCL11BQ9C0K0 894 aaPredicted RBP17.15■□□□□ 0.34
CPNE6-210ENST00000558995 NLRP1Q9C000 1473 aa17.15■□□□□ 0.34
CPNE6-210ENST00000558995 SLC26A8Q96RN1 970 aa17.15■□□□□ 0.34
CPNE6-210ENST00000558995 ADAMTS13Q76LX8 1427 aa17.15■□□□□ 0.34
CPNE6-210ENST00000558995 CT47B1P0C2W7 299 aaPredicted RBP17.14■□□□□ 0.33
CPNE6-210ENST00000558995 RLBP1P12271 317 aa17.14■□□□□ 0.33
CPNE6-210ENST00000558995 RBM10P98175 930 aaKnown RBP17.14■□□□□ 0.33
CPNE6-210ENST00000558995 KLHL34Q8N239 644 aa17.14■□□□□ 0.33
CPNE6-210ENST00000558995 ADGRB2O60241 1585 aa17.14■□□□□ 0.33
CPNE6-210ENST00000558995 SLC4A3P48751 1232 aa17.13■□□□□ 0.33
CPNE6-210ENST00000558995 PLEKHF1Q96S99 279 aa17.13■□□□□ 0.33
CPNE6-210ENST00000558995 ROBO2Q9HCK4 1378 aa17.13■□□□□ 0.33
CPNE6-210ENST00000558995 C3P01024 1663 aa17.13■□□□□ 0.33
CPNE6-210ENST00000558995 FBLN1P23142 703 aa17.12■□□□□ 0.33
CPNE6-210ENST00000558995 BCL2L13Q9BXK5 485 aa17.12■□□□□ 0.33
CPNE6-210ENST00000558995 MED14O60244 1454 aa17.12■□□□□ 0.33
CPNE6-210ENST00000558995 PCDHB15Q9Y5E8 787 aa17.12■□□□□ 0.33
CPNE6-210ENST00000558995 TECPR2O15040 1411 aa17.11■□□□□ 0.33
CPNE6-210ENST00000558995 U2SURPO15042 1029 aaKnown RBP17.11■□□□□ 0.33
CPNE6-210ENST00000558995 TNNQ9UQP3 1299 aa17.11■□□□□ 0.33
CPNE6-210ENST00000558995 TMPOP42166 694 aaKnown RBP17.11■□□□□ 0.33
CPNE6-210ENST00000558995 FAM135BQ49AJ0 1406 aa17.1■□□□□ 0.33
CPNE6-210ENST00000558995 PLEKHG1Q9ULL1 1385 aa17.1■□□□□ 0.33
CPNE6-210ENST00000558995 NUDT16Q96DE0 195 aaKnown RBP17.1■□□□□ 0.33
CPNE6-210ENST00000558995 COL3A1P02461 1466 aaPredicted RBP17.1■□□□□ 0.33
CPNE6-210ENST00000558995 PPIP5K1Q6PFW1 1433 aa17.1■□□□□ 0.33
CPNE6-210ENST00000558995 ZKSCAN2Q63HK3 967 aa17.09■□□□□ 0.33
CPNE6-210ENST00000558995 RWDD1Q9H446 243 aaPredicted RBP17.09■□□□□ 0.33
CPNE6-210ENST00000558995 FER1L4A9Z1Z3 1794 aa17.09■□□□□ 0.33
CPNE6-210ENST00000558995 EID1Q9Y6B2 187 aa17.09■□□□□ 0.33
CPNE6-210ENST00000558995 MVPQ14764 893 aaKnown RBP17.08■□□□□ 0.33
CPNE6-210ENST00000558995 IL16Q14005 1332 aa17.08■□□□□ 0.32
CPNE6-210ENST00000558995 NUTM2FA1L443 756 aa17.08■□□□□ 0.32
CPNE6-210ENST00000558995 SIRT1Q96EB6 747 aa17.08■□□□□ 0.32
CPNE6-210ENST00000558995 TRIM35Q9UPQ4 493 aa17.08■□□□□ 0.32
CPNE6-210ENST00000558995 ATP7BP35670 1465 aa17.08■□□□□ 0.32
CPNE6-210ENST00000558995 CPS1P31327 1500 aa17.07■□□□□ 0.32
CPNE6-210ENST00000558995 USP19O94966 1318 aa17.07■□□□□ 0.32
CPNE6-210ENST00000558995 PRR36Q9H6K5 1346 aa17.07■□□□□ 0.32
CPNE6-210ENST00000558995 NFKBIBQ15653 356 aa17.07■□□□□ 0.32
CPNE6-210ENST00000558995 DZIP1LQ8IYY4 767 aaKnown RBP17.07■□□□□ 0.32
CPNE6-210ENST00000558995 TSR2Q969E8 191 aaKnown RBP17.07■□□□□ 0.32
CPNE6-210ENST00000558995 PNNQ9H307 717 aaKnown RBP17.07■□□□□ 0.32
CPNE6-210ENST00000558995 CCDC61Q9Y6R9 512 aa17.07■□□□□ 0.32
CPNE6-210ENST00000558995 KNDC1Q76NI1 1749 aa17.06■□□□□ 0.32
CPNE6-210ENST00000558995 ZRANB1Q9UGI0 708 aa17.06■□□□□ 0.32
CPNE6-210ENST00000558995 PTPRUQ92729 1446 aa17.06■□□□□ 0.32
CPNE6-210ENST00000558995 PNPLA6Q8IY17 1366 aa17.06■□□□□ 0.32
CPNE6-210ENST00000558995 CPSF1Q10570 1443 aaKnown RBP17.06■□□□□ 0.32
CPNE6-210ENST00000558995 DIAPH1O60610 1272 aaKnown RBP17.06■□□□□ 0.32
CPNE6-210ENST00000558995 EXOSC9Q06265 439 aaKnown RBP17.06■□□□□ 0.32
CPNE6-210ENST00000558995 NME9Q86XW9 330 aa17.06■□□□□ 0.32
CPNE6-210ENST00000558995 FTSJ3Q8IY81 847 aaKnown RBP17.06■□□□□ 0.32
CPNE6-210ENST00000558995 PDZRN3Q9UPQ7 1066 aa17.06■□□□□ 0.32
CPNE6-210ENST00000558995 SMC4Q9NTJ3 1288 aa17.05■□□□□ 0.32
CPNE6-210ENST00000558995 RSPH6AQ9H0K4 717 aa17.04■□□□□ 0.32
CPNE6-210ENST00000558995 ANKRD26Q9UPS8 1709 aa17.04■□□□□ 0.32
CPNE6-210ENST00000558995 SEC24BO95487 1268 aa17.04■□□□□ 0.32
CPNE6-210ENST00000558995 ARHGAP23Q9P227 1491 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms