RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 ALS2Q96Q42 1657 aa17.2■□□□□ 0.34
GABPB1-208ENST00000558970 USP6P35125 1406 aa17.2■□□□□ 0.34
GABPB1-208ENST00000558970 NINLQ9Y2I6 1382 aa17.19■□□□□ 0.34
GABPB1-208ENST00000558970 POTEAQ6S8J7 498 aa17.19■□□□□ 0.34
GABPB1-208ENST00000558970 TERF2IPQ9NYB0 399 aa17.19■□□□□ 0.34
GABPB1-208ENST00000558970 CPSF1Q10570 1443 aaKnown RBP17.19■□□□□ 0.34
GABPB1-208ENST00000558970 PIK3C2AO00443 1686 aa17.19■□□□□ 0.34
GABPB1-208ENST00000558970 ANKRD36BQ8N2N9 1353 aa17.18■□□□□ 0.34
GABPB1-208ENST00000558970 NUTM2GQ5VZR2 741 aa17.18■□□□□ 0.34
GABPB1-208ENST00000558970 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.18■□□□□ 0.34
GABPB1-208ENST00000558970 SOS2Q07890 1332 aaPredicted RBP17.18■□□□□ 0.34
GABPB1-208ENST00000558970 SHPRHQ149N8 1683 aa17.17■□□□□ 0.34
GABPB1-208ENST00000558970 TNS3Q68CZ2 1445 aa17.17■□□□□ 0.34
GABPB1-208ENST00000558970 ABCA3Q99758 1704 aa17.16■□□□□ 0.34
GABPB1-208ENST00000558970 ZNF316A6NFI3 1004 aaPredicted RBP17.16■□□□□ 0.34
GABPB1-208ENST00000558970 PANK3Q9H999 370 aa17.16■□□□□ 0.34
GABPB1-208ENST00000558970 MARF1Q9Y4F3 1742 aaKnown RBP17.16■□□□□ 0.34
GABPB1-208ENST00000558970 NSD3Q9BZ95 1437 aa17.15■□□□□ 0.34
GABPB1-208ENST00000558970 CNGB1Q14028 1251 aaPredicted RBP17.15■□□□□ 0.34
GABPB1-208ENST00000558970 ZNF692Q9BU19 519 aaPredicted RBP17.14■□□□□ 0.33
GABPB1-208ENST00000558970 PHRF1Q9P1Y6 1649 aaKnown RBP17.14■□□□□ 0.33
GABPB1-208ENST00000558970 EDC4Q6P2E9 1401 aaKnown RBP17.13■□□□□ 0.33
GABPB1-208ENST00000558970 CRYBG1Q9Y4K1 1723 aa17.13■□□□□ 0.33
GABPB1-208ENST00000558970 LRRC59Q96AG4 307 aaKnown RBP17.13■□□□□ 0.33
GABPB1-208ENST00000558970 SPATA31A3Q5VYP0 1347 aa17.13■□□□□ 0.33
GABPB1-208ENST00000558970 TTC21BQ7Z4L5 1316 aa17.13■□□□□ 0.33
GABPB1-208ENST00000558970 SBNO1A3KN83 1393 aa17.13■□□□□ 0.33
GABPB1-208ENST00000558970 JCADQ9P266 1359 aa17.13■□□□□ 0.33
GABPB1-208ENST00000558970 COL22A1Q8NFW1 1626 aaPredicted RBP17.12■□□□□ 0.33
GABPB1-208ENST00000558970 NME9Q86XW9 330 aa17.12■□□□□ 0.33
GABPB1-208ENST00000558970 ABTB2Q8N961 1025 aa17.12■□□□□ 0.33
GABPB1-208ENST00000558970 CARD14Q9BXL6 1004 aa17.12■□□□□ 0.33
GABPB1-208ENST00000558970 PNPLA6Q8IY17 1366 aa17.12■□□□□ 0.33
GABPB1-208ENST00000558970 ANKRD26Q9UPS8 1709 aa17.11■□□□□ 0.33
GABPB1-208ENST00000558970 DDX10Q13206 875 aaKnown RBP17.11■□□□□ 0.33
GABPB1-208ENST00000558970 ZRANB1Q9UGI0 708 aa17.11■□□□□ 0.33
GABPB1-208ENST00000558970 SSH2Q76I76 1423 aa17.11■□□□□ 0.33
GABPB1-208ENST00000558970 NUTM2BA6NNL0 878 aaPredicted RBP17.1■□□□□ 0.33
GABPB1-208ENST00000558970 NUTM2EB1AL46 878 aaPredicted RBP17.1■□□□□ 0.33
GABPB1-208ENST00000558970 NUTM2AQ8IVF1 878 aaPredicted RBP17.1■□□□□ 0.33
GABPB1-208ENST00000558970 CABLES1Q8TDN4 633 aa17.1■□□□□ 0.33
GABPB1-208ENST00000558970 SOX12O15370 315 aa17.09■□□□□ 0.33
GABPB1-208ENST00000558970 ARHGEF10O15013 1369 aa17.09■□□□□ 0.33
GABPB1-208ENST00000558970 TTC21AQ8NDW8 1320 aa17.08■□□□□ 0.32
GABPB1-208ENST00000558970 HAP1P54257 671 aaPredicted RBP17.08■□□□□ 0.32
GABPB1-208ENST00000558970 NLRP6P59044 892 aa17.08■□□□□ 0.32
GABPB1-208ENST00000558970 GGNBP2Q9H3C7 697 aa17.08■□□□□ 0.32
GABPB1-208ENST00000558970 USP54Q70EL1 1684 aa17.07■□□□□ 0.32
GABPB1-208ENST00000558970 LTN1O94822 1766 aa17.07■□□□□ 0.32
GABPB1-208ENST00000558970 BRD4O60885 1362 aaPredicted RBP17.06■□□□□ 0.32
GABPB1-208ENST00000558970 SPATA31A6Q5VVP1 1343 aa17.06■□□□□ 0.32
GABPB1-208ENST00000558970 KNSTRNQ9Y448 316 aa17.06■□□□□ 0.32
GABPB1-208ENST00000558970 ZBTB7CA1YPR0 619 aa17.05■□□□□ 0.32
GABPB1-208ENST00000558970 LRP6O75581 1613 aa17.04■□□□□ 0.32
GABPB1-208ENST00000558970 CGNL1Q0VF96 1302 aa17.04■□□□□ 0.32
GABPB1-208ENST00000558970 FYB1O15117 783 aa17.03■□□□□ 0.32
GABPB1-208ENST00000558970 ADAMTS2O95450 1211 aa17.03■□□□□ 0.32
GABPB1-208ENST00000558970 CC2D1BQ5T0F9 858 aaKnown RBP17.03■□□□□ 0.32
GABPB1-208ENST00000558970 NLRP13Q86W25 1043 aa17.03■□□□□ 0.32
GABPB1-208ENST00000558970 ZNF772Q68DY9 489 aaPredicted RBP17.02■□□□□ 0.32
GABPB1-208ENST00000558970 COG3Q96JB2 828 aa17.02■□□□□ 0.32
GABPB1-208ENST00000558970 OVOS2A0A0J9YW53 1432 aa17.02■□□□□ 0.31
GABPB1-208ENST00000558970 OVOS2Q6IE36 1432 aa17.02■□□□□ 0.31
GABPB1-208ENST00000558970 SLIT3O75094 1523 aa17.01■□□□□ 0.31
GABPB1-208ENST00000558970 MAP2P11137 1827 aaKnown RBP17.01■□□□□ 0.31
GABPB1-208ENST00000558970 TNNT2P45379 298 aaPredicted RBP17.01■□□□□ 0.31
GABPB1-208ENST00000558970 RGPD5Q99666 1765 aa17.01■□□□□ 0.31
GABPB1-208ENST00000558970 PLCH1Q4KWH8 1693 aa17.01■□□□□ 0.31
GABPB1-208ENST00000558970 PER1O15534 1290 aaPredicted RBP17■□□□□ 0.31
GABPB1-208ENST00000558970 MEX3CQ5U5Q3 659 aaKnown RBP17■□□□□ 0.31
GABPB1-208ENST00000558970 USP19O94966 1318 aa16.99■□□□□ 0.31
GABPB1-208ENST00000558970 FBLN1P23142 703 aa16.99■□□□□ 0.31
GABPB1-208ENST00000558970 ZC3H6P61129 1189 aaKnown RBP16.99■□□□□ 0.31
GABPB1-208ENST00000558970 NFAT5O94916 1531 aa16.99■□□□□ 0.31
GABPB1-208ENST00000558970 USP31Q70CQ4 1352 aa16.99■□□□□ 0.31
GABPB1-208ENST00000558970 GCP02774 474 aa16.97■□□□□ 0.31
GABPB1-208ENST00000558970 AMER1Q5JTC6 1135 aaPredicted RBP16.97■□□□□ 0.31
GABPB1-208ENST00000558970 CHRNA2Q15822 529 aa16.96■□□□□ 0.31
GABPB1-208ENST00000558970 MORC1Q86VD1 984 aa16.96■□□□□ 0.31
GABPB1-208ENST00000558970 C8orf37Q96NL8 207 aa16.96■□□□□ 0.31
GABPB1-208ENST00000558970 KIAA0232Q92628 1395 aa16.96■□□□□ 0.31
GABPB1-208ENST00000558970 COL14A1Q05707 1796 aaKnown RBP16.95■□□□□ 0.3
GABPB1-208ENST00000558970 NSD2O96028 1365 aa16.95■□□□□ 0.3
GABPB1-208ENST00000558970 UPF1Q92900 1129 aaKnown RBP eCLIP16.95■□□□□ 0.3
GABPB1-208ENST00000558970 PEAK1Q9H792 1746 aa16.94■□□□□ 0.3
GABPB1-208ENST00000558970 RRS1Q15050 365 aaKnown RBP16.94■□□□□ 0.3
GABPB1-208ENST00000558970 PRDM11Q9NQV5 511 aa16.94■□□□□ 0.3
GABPB1-208ENST00000558970 KCNH5Q8NCM2 988 aa16.93■□□□□ 0.3
GABPB1-208ENST00000558970 PPM1GO15355 546 aaPredicted RBP16.92■□□□□ 0.3
GABPB1-208ENST00000558970 RXRBP28702 533 aa16.92■□□□□ 0.3
GABPB1-208ENST00000558970 COL18A1P39060 1754 aa16.92■□□□□ 0.3
GABPB1-208ENST00000558970 NRAPQ86VF7 1730 aa16.91■□□□□ 0.3
GABPB1-208ENST00000558970 NGLY1Q96IV0 654 aa16.91■□□□□ 0.3
GABPB1-208ENST00000558970 CDK12Q9NYV4 1490 aaPredicted RBP16.91■□□□□ 0.3
GABPB1-208ENST00000558970 LMO7Q8WWI1 1683 aa16.91■□□□□ 0.3
GABPB1-208ENST00000558970 NWD2Q9ULI1 1742 aa16.9■□□□□ 0.3
GABPB1-208ENST00000558970 RGPD2P0DJD1 1756 aa16.9■□□□□ 0.3
GABPB1-208ENST00000558970 FAM83GA6ND36 823 aa16.9■□□□□ 0.3
GABPB1-208ENST00000558970 EMILIN1Q9Y6C2 1016 aa16.9■□□□□ 0.3
GABPB1-208ENST00000558970 MAP3K19Q56UN5 1328 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms