RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 MRPL14Q6P1L8 145 aaKnown RBP6.84□□□□□ -1.31
LRRC28-212ENST00000558911 ZNF511Q8NB15 262 aa6.84□□□□□ -1.31
LRRC28-212ENST00000558911 EVA1BQ9NVM1 165 aa6.84□□□□□ -1.31
LRRC28-212ENST00000558911 LORP23490 312 aaPredicted RBP6.83□□□□□ -1.32
LRRC28-212ENST00000558911 C6orf118Q5T5N4 469 aa6.83□□□□□ -1.32
LRRC28-212ENST00000558911 NPAS3Q8IXF0 933 aa6.83□□□□□ -1.32
LRRC28-212ENST00000558911 VARSP26640 1264 aaKnown RBP6.82□□□□□ -1.32
LRRC28-212ENST00000558911 TIMP2P16035 220 aa6.81□□□□□ -1.32
LRRC28-212ENST00000558911 MTMR2Q13614 643 aa6.81□□□□□ -1.32
LRRC28-212ENST00000558911 AGERQ15109 404 aa6.81□□□□□ -1.32
LRRC28-212ENST00000558911 ADH1CP00326 375 aa6.8□□□□□ -1.32
LRRC28-212ENST00000558911 ZFAND3Q9H8U3 227 aa6.8□□□□□ -1.32
LRRC28-212ENST00000558911 MAN1A2O60476 641 aa6.79□□□□□ -1.32
LRRC28-212ENST00000558911 FAM174AQ8TBP5 190 aa6.79□□□□□ -1.32
LRRC28-212ENST00000558911 FOXJ1Q92949 421 aa6.79□□□□□ -1.32
LRRC28-212ENST00000558911 ZIC2O95409 532 aaPredicted RBP6.78□□□□□ -1.32
LRRC28-212ENST00000558911 PRKCSHP14314 528 aaPredicted RBP6.78□□□□□ -1.32
LRRC28-212ENST00000558911 TSC1Q92574 1164 aa6.78□□□□□ -1.32
LRRC28-212ENST00000558911 BMP2P12643 396 aa6.77□□□□□ -1.33
LRRC28-212ENST00000558911 CSPP1Q1MSJ5 1256 aa6.77□□□□□ -1.33
LRRC28-212ENST00000558911 ITPKCQ96DU7 683 aa6.77□□□□□ -1.33
LRRC28-212ENST00000558911 BEGAINQ9BUH8 593 aa6.77□□□□□ -1.33
LRRC28-212ENST00000558911 MAP10Q9P2G4 905 aa6.77□□□□□ -1.33
LRRC28-212ENST00000558911 SOCS7O14512 581 aa6.76□□□□□ -1.33
LRRC28-212ENST00000558911 GIGYF2Q6Y7W6 1299 aaKnown RBP6.76□□□□□ -1.33
LRRC28-212ENST00000558911 PCDHB15Q9Y5E8 787 aa6.76□□□□□ -1.33
LRRC28-212ENST00000558911 SPDYE5A6NIY4 337 aa6.75□□□□□ -1.33
LRRC28-212ENST00000558911 UPP2O95045 317 aa6.75□□□□□ -1.33
LRRC28-212ENST00000558911 CFAP99D6REC4 459 aa6.74□□□□□ -1.33
LRRC28-212ENST00000558911 NR3C2P08235 984 aa6.74□□□□□ -1.33
LRRC28-212ENST00000558911 LYPD8Q6UX82 237 aa6.74□□□□□ -1.33
LRRC28-212ENST00000558911 TBC1D2Q9BYX2 928 aa6.74□□□□□ -1.33
LRRC28-212ENST00000558911 PPFIA3O75145 1194 aa6.73□□□□□ -1.33
LRRC28-212ENST00000558911 DESI1Q6ICB0 168 aa6.73□□□□□ -1.33
LRRC28-212ENST00000558911 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.73□□□□□ -1.33
LRRC28-212ENST00000558911 MPNDQ8N594 471 aa6.73□□□□□ -1.33
LRRC28-212ENST00000558911 CABLES1Q8TDN4 633 aa6.73□□□□□ -1.33
LRRC28-212ENST00000558911 KLF16Q9BXK1 252 aaPredicted RBP6.73□□□□□ -1.33
LRRC28-212ENST00000558911 HRCP23327 699 aa6.72□□□□□ -1.33
LRRC28-212ENST00000558911 C4orf48Q5BLP8 95 aa6.72□□□□□ -1.33
LRRC28-212ENST00000558911 RSBN1LQ6PCB5 846 aaPredicted RBP6.72□□□□□ -1.33
LRRC28-212ENST00000558911 KCTD17Q8N5Z5 321 aa6.72□□□□□ -1.33
LRRC28-212ENST00000558911 PER1O15534 1290 aaPredicted RBP6.71□□□□□ -1.34
LRRC28-212ENST00000558911 NR5A1Q13285 461 aa6.71□□□□□ -1.34
LRRC28-212ENST00000558911 LINC00528Q8N1L1 170 aa6.71□□□□□ -1.34
LRRC28-212ENST00000558911 CDK15Q96Q40 435 aa6.71□□□□□ -1.34
LRRC28-212ENST00000558911 ZBTB3Q9H5J0 574 aa6.71□□□□□ -1.34
LRRC28-212ENST00000558911 MAGEB6P1A0A0J9YX57 407 aa6.7□□□□□ -1.34
LRRC28-212ENST00000558911 NUTM2BA6NNL0 878 aaPredicted RBP6.7□□□□□ -1.34
LRRC28-212ENST00000558911 NUTM2EB1AL46 878 aaPredicted RBP6.7□□□□□ -1.34
LRRC28-212ENST00000558911 VSIG8P0DPA2 414 aa6.7□□□□□ -1.34
LRRC28-212ENST00000558911 NUTM2DQ5VT03 806 aaPredicted RBP6.7□□□□□ -1.34
LRRC28-212ENST00000558911 BPHLQ86WA6 291 aaPredicted RBP6.7□□□□□ -1.34
LRRC28-212ENST00000558911 NUTM2AQ8IVF1 878 aaPredicted RBP6.7□□□□□ -1.34
LRRC28-212ENST00000558911 CNTNAP3BQ96NU0 1288 aa6.7□□□□□ -1.34
LRRC28-212ENST00000558911 CNTNAP3Q9BZ76 1288 aa6.7□□□□□ -1.34
LRRC28-212ENST00000558911 DNMT3LQ9UJW3 386 aa6.7□□□□□ -1.34
LRRC28-212ENST00000558911 FIGNL2A6NMB9 653 aa6.69□□□□□ -1.34
LRRC28-212ENST00000558911 F12P00748 615 aaPredicted RBP6.69□□□□□ -1.34
LRRC28-212ENST00000558911 FSHRP23945 695 aa6.69□□□□□ -1.34
LRRC28-212ENST00000558911 GRM5P41594 1212 aa6.69□□□□□ -1.34
LRRC28-212ENST00000558911 SUZ12Q15022 739 aaKnown RBP6.69□□□□□ -1.34
LRRC28-212ENST00000558911 BARGINQ6ZT62 677 aa6.69□□□□□ -1.34
LRRC28-212ENST00000558911 VASH1Q7L8A9 365 aaPredicted RBP6.69□□□□□ -1.34
LRRC28-212ENST00000558911 RIC3Q7Z5B4 369 aa6.69□□□□□ -1.34
LRRC28-212ENST00000558911 SPTLC1O15269 473 aa6.68□□□□□ -1.34
LRRC28-212ENST00000558911 DIXDC1Q155Q3 683 aa6.68□□□□□ -1.34
LRRC28-212ENST00000558911 AMHR2Q16671 573 aa6.68□□□□□ -1.34
LRRC28-212ENST00000558911 VSIG10Q8N0Z9 540 aa6.68□□□□□ -1.34
LRRC28-212ENST00000558911 CARD14Q9BXL6 1004 aa6.68□□□□□ -1.34
LRRC28-212ENST00000558911 MEIOBQ8N635 442 aa6.67□□□□□ -1.34
LRRC28-212ENST00000558911 GPR161Q8N6U8 529 aaKnown RBP6.67□□□□□ -1.34
LRRC28-212ENST00000558911 SOS2Q07890 1332 aaPredicted RBP6.67□□□□□ -1.34
LRRC28-212ENST00000558911 LMTK3Q96Q04 1460 aa6.66□□□□□ -1.34
LRRC28-212ENST00000558911 LOC100996750A0A140TA64 210 aa6.66□□□□□ -1.34
LRRC28-212ENST00000558911 ZMYND10O75800 440 aa6.66□□□□□ -1.34
LRRC28-212ENST00000558911 PARP9Q8IXQ6 854 aa6.66□□□□□ -1.34
LRRC28-212ENST00000558911 KRTAP4-6Q9BYQ5 205 aa6.66□□□□□ -1.34
LRRC28-212ENST00000558911 TMEM151AQ8N4L1 468 aa6.65□□□□□ -1.34
LRRC28-212ENST00000558911 ZC3H15Q8WU90 426 aaKnown RBP6.65□□□□□ -1.34
LRRC28-212ENST00000558911 TSEN34Q9BSV6 310 aaKnown RBP6.65□□□□□ -1.34
LRRC28-212ENST00000558911 TTLL8A6PVC2 850 aa6.64□□□□□ -1.35
LRRC28-212ENST00000558911 GDF11O95390 407 aa6.64□□□□□ -1.35
LRRC28-212ENST00000558911 GJA5P36382 358 aa6.64□□□□□ -1.35
LRRC28-212ENST00000558911 KRT76Q01546 638 aa6.64□□□□□ -1.35
LRRC28-212ENST00000558911 PTSQ03393 145 aa6.64□□□□□ -1.35
LRRC28-212ENST00000558911 KCNMA1Q12791 1236 aa6.64□□□□□ -1.35
LRRC28-212ENST00000558911 CBLBQ13191 982 aa6.64□□□□□ -1.35
LRRC28-212ENST00000558911 QPCTQ16769 361 aa6.64□□□□□ -1.35
LRRC28-212ENST00000558911 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.64□□□□□ -1.35
LRRC28-212ENST00000558911 CCDC116Q8IYX3 515 aa6.64□□□□□ -1.35
LRRC28-212ENST00000558911 BCANQ96GW7 911 aa6.64□□□□□ -1.35
LRRC28-212ENST00000558911 CDC14CA4D256 554 aa6.63□□□□□ -1.35
LRRC28-212ENST00000558911 RASSF7Q02833 373 aa6.63□□□□□ -1.35
LRRC28-212ENST00000558911 SVOPQ8N4V2 548 aa6.63□□□□□ -1.35
LRRC28-212ENST00000558911 ARMC2Q8NEN0 867 aa6.63□□□□□ -1.35
LRRC28-212ENST00000558911 COL25A1Q9BXS0 654 aaPredicted RBP6.63□□□□□ -1.35
LRRC28-212ENST00000558911 LIMD1Q9UGP4 676 aa6.63□□□□□ -1.35
LRRC28-212ENST00000558911 ADAMTS8Q9UP79 889 aa6.63□□□□□ -1.35
LRRC28-212ENST00000558911 EMILIN1Q9Y6C2 1016 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms