RNA–Protein interactions for RNA: ENST00000558881.1

EXD1-204, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

TSL 2

Gene EXD1, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-204ENST00000558881 TULP4Q9NRJ4 1543 aa11.43□□□□□ -0.58
EXD1-204ENST00000558881 MINK1Q8N4C8 1332 aaPredicted RBP11.43□□□□□ -0.58
EXD1-204ENST00000558881 POGKQ9P215 609 aa11.43□□□□□ -0.58
EXD1-204ENST00000558881 ARHGEF28Q8N1W1 1705 aaKnown RBP11.42□□□□□ -0.58
EXD1-204ENST00000558881 PUS7Q96PZ0 661 aaKnown RBP11.42□□□□□ -0.58
EXD1-204ENST00000558881 PTPRMP28827 1452 aa11.42□□□□□ -0.58
EXD1-204ENST00000558881 NSD3Q9BZ95 1437 aa11.42□□□□□ -0.58
EXD1-204ENST00000558881 TNRQ92752 1358 aa11.42□□□□□ -0.58
EXD1-204ENST00000558881 WAPLQ7Z5K2 1190 aa11.41□□□□□ -0.58
EXD1-204ENST00000558881 SRPK2P78362 688 aaKnown RBP11.4□□□□□ -0.58
EXD1-204ENST00000558881 EXOC6Q8TAG9 804 aa11.4□□□□□ -0.58
EXD1-204ENST00000558881 TNNT2P45379 298 aaPredicted RBP11.39□□□□□ -0.59
EXD1-204ENST00000558881 NUBP1P53384 320 aa11.39□□□□□ -0.59
EXD1-204ENST00000558881 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.39□□□□□ -0.59
EXD1-204ENST00000558881 CACNB1Q02641 598 aaPredicted RBP11.39□□□□□ -0.59
EXD1-204ENST00000558881 WDR43Q15061 677 aaKnown RBP eCLIP11.39□□□□□ -0.59
EXD1-204ENST00000558881 DCAF8Q5TAQ9 597 aa11.39□□□□□ -0.59
EXD1-204ENST00000558881 MORC1Q86VD1 984 aa11.39□□□□□ -0.59
EXD1-204ENST00000558881 BLMP54132 1417 aaPredicted RBP11.39□□□□□ -0.59
EXD1-204ENST00000558881 RRP9O43818 475 aaKnown RBP11.38□□□□□ -0.59
EXD1-204ENST00000558881 CDK19Q9BWU1 502 aa11.38□□□□□ -0.59
EXD1-204ENST00000558881 METP08581 1390 aa11.38□□□□□ -0.59
EXD1-204ENST00000558881 PLEKHH1Q9ULM0 1364 aa11.38□□□□□ -0.59
EXD1-204ENST00000558881 CDCA7LQ96GN5 454 aa11.38□□□□□ -0.59
EXD1-204ENST00000558881 INSRP06213 1382 aa11.38□□□□□ -0.59
EXD1-204ENST00000558881 RRAGDQ9NQL2 400 aaPredicted RBP11.37□□□□□ -0.59
EXD1-204ENST00000558881 DAXXQ9UER7 740 aaPredicted RBP11.37□□□□□ -0.59
EXD1-204ENST00000558881 ANKRD36BQ8N2N9 1353 aa11.37□□□□□ -0.59
EXD1-204ENST00000558881 FRAT2O75474 233 aaPredicted RBP11.37□□□□□ -0.59
EXD1-204ENST00000558881 TMEM2Q9UHN6 1383 aa11.36□□□□□ -0.59
EXD1-204ENST00000558881 LTKP29376 864 aa11.36□□□□□ -0.59
EXD1-204ENST00000558881 HDGFP51858 240 aaKnown RBP11.36□□□□□ -0.59
EXD1-204ENST00000558881 TXNDC2Q86VQ3 553 aa11.36□□□□□ -0.59
EXD1-204ENST00000558881 CGNL1Q0VF96 1302 aa11.36□□□□□ -0.59
EXD1-204ENST00000558881 ABCC11Q96J66 1382 aa11.36□□□□□ -0.59
EXD1-204ENST00000558881 CCDC146Q8IYE0 955 aa11.35□□□□□ -0.59
EXD1-204ENST00000558881 A0A1W2PP64 1363 aa11.35□□□□□ -0.59
EXD1-204ENST00000558881 RCAN3Q9UKA8 241 aa11.35□□□□□ -0.59
EXD1-204ENST00000558881 PDE3BQ13370 1112 aa11.34□□□□□ -0.59
EXD1-204ENST00000558881 HSP90AA2PQ14568 343 aaPredicted RBP11.34□□□□□ -0.59
EXD1-204ENST00000558881 CABP1Q9NZU7 370 aa11.34□□□□□ -0.59
EXD1-204ENST00000558881 ATAD2Q6PL18 1390 aa11.34□□□□□ -0.59
EXD1-204ENST00000558881 RIOK3O14730 519 aaKnown RBP11.34□□□□□ -0.59
EXD1-204ENST00000558881 NRXN3Q9Y4C0 1643 aa11.34□□□□□ -0.59
EXD1-204ENST00000558881 SLC4A3P48751 1232 aa11.33□□□□□ -0.6
EXD1-204ENST00000558881 NKX1-1Q15270 411 aaPredicted RBP11.33□□□□□ -0.6
EXD1-204ENST00000558881 DNAJC5Q9H3Z4 198 aa11.33□□□□□ -0.6
EXD1-204ENST00000558881 MTHFSP49914 203 aa11.33□□□□□ -0.6
EXD1-204ENST00000558881 L1TD1Q5T7N2 865 aaKnown RBP11.33□□□□□ -0.6
EXD1-204ENST00000558881 SETD1AO15047 1707 aaKnown RBP11.33□□□□□ -0.6
EXD1-204ENST00000558881 CD163L1Q9NR16 1453 aa11.32□□□□□ -0.6
EXD1-204ENST00000558881 GGNBP2Q9H3C7 697 aa11.32□□□□□ -0.6
EXD1-204ENST00000558881 DLC1Q96QB1 1528 aa11.32□□□□□ -0.6
EXD1-204ENST00000558881 POLR3AO14802 1390 aaPredicted RBP11.32□□□□□ -0.6
EXD1-204ENST00000558881 SPDYE1Q8NFV5 336 aaPredicted RBP11.32□□□□□ -0.6
EXD1-204ENST00000558881 TERF2IPQ9NYB0 399 aa11.32□□□□□ -0.6
EXD1-204ENST00000558881 PODXL2Q9NZ53 605 aa11.32□□□□□ -0.6
EXD1-204ENST00000558881 CLEC11AQ9Y240 323 aa11.32□□□□□ -0.6
EXD1-204ENST00000558881 NINLQ9Y2I6 1382 aa11.31□□□□□ -0.6
EXD1-204ENST00000558881 APAF1O14727 1248 aa11.31□□□□□ -0.6
EXD1-204ENST00000558881 FYB1O15117 783 aa11.31□□□□□ -0.6
EXD1-204ENST00000558881 UBR1Q8IWV7 1749 aa11.31□□□□□ -0.6
EXD1-204ENST00000558881 HSP90AA1P07900 732 aaKnown RBP11.3□□□□□ -0.6
EXD1-204ENST00000558881 CLCN1P35523 988 aa11.3□□□□□ -0.6
EXD1-204ENST00000558881 ADAMTS13Q76LX8 1427 aa11.3□□□□□ -0.6
EXD1-204ENST00000558881 NLRP1Q9C000 1473 aa11.3□□□□□ -0.6
EXD1-204ENST00000558881 WASLO00401 505 aaPredicted RBP11.3□□□□□ -0.6
EXD1-204ENST00000558881 HDGFL2Q7Z4V5 671 aaPredicted RBP11.3□□□□□ -0.6
EXD1-204ENST00000558881 SLC26A8Q96RN1 970 aa11.3□□□□□ -0.6
EXD1-204ENST00000558881 SIRT1Q96EB6 747 aa11.29□□□□□ -0.6
EXD1-204ENST00000558881 ZNF521Q96K83 1311 aa11.29□□□□□ -0.6
EXD1-204ENST00000558881 NCKAP5LQ9HCH0 1330 aa11.29□□□□□ -0.6
EXD1-204ENST00000558881 USP32Q8NFA0 1604 aa11.29□□□□□ -0.6
EXD1-204ENST00000558881 NSD2O96028 1365 aa11.29□□□□□ -0.6
EXD1-204ENST00000558881 STK25O00506 426 aa11.29□□□□□ -0.6
EXD1-204ENST00000558881 PNNQ9H307 717 aaKnown RBP11.29□□□□□ -0.6
EXD1-204ENST00000558881 ROBO2Q9HCK4 1378 aa11.28□□□□□ -0.6
EXD1-204ENST00000558881 PLEKHG1Q9ULL1 1385 aa11.28□□□□□ -0.6
EXD1-204ENST00000558881 KDM2BQ8NHM5 1336 aa11.28□□□□□ -0.6
EXD1-204ENST00000558881 FAM161AQ3B820 660 aa11.28□□□□□ -0.6
EXD1-204ENST00000558881 FAM212AQ96EL1 285 aa11.28□□□□□ -0.6
EXD1-204ENST00000558881 EID1Q9Y6B2 187 aa11.28□□□□□ -0.6
EXD1-204ENST00000558881 C3P01024 1663 aa11.28□□□□□ -0.6
EXD1-204ENST00000558881 VIRMAQ69YN4 1812 aaKnown RBP11.28□□□□□ -0.6
EXD1-204ENST00000558881 GTPBP6O43824 516 aaPredicted RBP11.28□□□□□ -0.6
EXD1-204ENST00000558881 PRR29P0C7W0 189 aa11.27□□□□□ -0.61
EXD1-204ENST00000558881 C8orf34Q49A92 452 aa11.27□□□□□ -0.61
EXD1-204ENST00000558881 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.27□□□□□ -0.61
EXD1-204ENST00000558881 NAP1L5Q96NT1 182 aaPredicted RBP11.27□□□□□ -0.61
EXD1-204ENST00000558881 CREBZFQ9NS37 354 aa11.27□□□□□ -0.61
EXD1-204ENST00000558881 TECPR2O15040 1411 aa11.27□□□□□ -0.61
EXD1-204ENST00000558881 FAM135BQ49AJ0 1406 aa11.27□□□□□ -0.61
EXD1-204ENST00000558881 DUSP27Q5VZP5 1158 aa11.26□□□□□ -0.61
EXD1-204ENST00000558881 NUDT16Q96DE0 195 aaKnown RBP11.26□□□□□ -0.61
EXD1-204ENST00000558881 GOLGA2Q08379 1002 aa11.26□□□□□ -0.61
EXD1-204ENST00000558881 THEMISQ8N1K5 641 aaPredicted RBP11.26□□□□□ -0.61
EXD1-204ENST00000558881 CFAP53Q96M91 514 aa11.26□□□□□ -0.61
EXD1-204ENST00000558881 FBLN1P23142 703 aa11.25□□□□□ -0.61
EXD1-204ENST00000558881 PTPRUQ92729 1446 aa11.25□□□□□ -0.61
EXD1-204ENST00000558881 SLFN5Q08AF3 891 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms