RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 USP21Q9UK80 565 aa11.74□□□□□ -0.53
TRAF3-205ENST00000558700 TRPC5Q9UL62 973 aaPredicted RBP11.74□□□□□ -0.53
TRAF3-205ENST00000558700 KDM2AQ9Y2K7 1162 aa11.74□□□□□ -0.53
TRAF3-205ENST00000558700 SBNO1A3KN83 1393 aa11.74□□□□□ -0.53
TRAF3-205ENST00000558700 ARHGEF10O15013 1369 aa11.74□□□□□ -0.53
TRAF3-205ENST00000558700 ALS2Q96Q42 1657 aa11.74□□□□□ -0.53
TRAF3-205ENST00000558700 PSME1Q06323 249 aa11.73□□□□□ -0.53
TRAF3-205ENST00000558700 FNBP4Q8N3X1 1017 aaPredicted RBP11.73□□□□□ -0.53
TRAF3-205ENST00000558700 TOPAZ1Q8N9V7 1692 aa11.73□□□□□ -0.53
TRAF3-205ENST00000558700 SLIT2O94813 1529 aa11.72□□□□□ -0.53
TRAF3-205ENST00000558700 ECM2O94769 699 aaPredicted RBP11.72□□□□□ -0.53
TRAF3-205ENST00000558700 KRT28Q7Z3Y7 464 aa11.72□□□□□ -0.53
TRAF3-205ENST00000558700 BBXQ8WY36 941 aaPredicted RBP11.72□□□□□ -0.53
TRAF3-205ENST00000558700 UPF1Q92900 1129 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRAF3-205ENST00000558700 RNF39Q9H2S5 420 aa11.72□□□□□ -0.53
TRAF3-205ENST00000558700 TRAK1Q9UPV9 953 aa11.72□□□□□ -0.53
TRAF3-205ENST00000558700 ATP7BP35670 1465 aa11.71□□□□□ -0.53
TRAF3-205ENST00000558700 BCL9LQ86UU0 1499 aa11.71□□□□□ -0.53
TRAF3-205ENST00000558700 ATAD2Q6PL18 1390 aa11.71□□□□□ -0.53
TRAF3-205ENST00000558700 MINK1Q8N4C8 1332 aaPredicted RBP11.71□□□□□ -0.53
TRAF3-205ENST00000558700 CRYBG1Q9Y4K1 1723 aa11.71□□□□□ -0.54
TRAF3-205ENST00000558700 GPRASP1Q5JY77 1395 aa11.7□□□□□ -0.54
TRAF3-205ENST00000558700 HIRIP3Q9BW71 556 aaPredicted RBP11.7□□□□□ -0.54
TRAF3-205ENST00000558700 GLI3P10071 1580 aa11.7□□□□□ -0.54
TRAF3-205ENST00000558700 C1QBPQ07021 282 aaKnown RBP11.69□□□□□ -0.54
TRAF3-205ENST00000558700 NRAPQ86VF7 1730 aa11.69□□□□□ -0.54
TRAF3-205ENST00000558700 QRICH2Q9H0J4 1663 aa11.68□□□□□ -0.54
TRAF3-205ENST00000558700 PRR36Q9H6K5 1346 aa11.68□□□□□ -0.54
TRAF3-205ENST00000558700 WASLO00401 505 aaPredicted RBP11.68□□□□□ -0.54
TRAF3-205ENST00000558700 PMFBP1Q8TBY8 1022 aa11.68□□□□□ -0.54
TRAF3-205ENST00000558700 COL14A1Q05707 1796 aaKnown RBP11.68□□□□□ -0.54
TRAF3-205ENST00000558700 RALGAPBQ86X10 1494 aa11.68□□□□□ -0.54
TRAF3-205ENST00000558700 PHRF1Q9P1Y6 1649 aaKnown RBP11.68□□□□□ -0.54
TRAF3-205ENST00000558700 LMOD2Q6P5Q4 547 aa11.67□□□□□ -0.54
TRAF3-205ENST00000558700 ABCB7O75027 752 aa11.66□□□□□ -0.54
TRAF3-205ENST00000558700 UNC5CLQ8IV45 518 aa11.66□□□□□ -0.54
TRAF3-205ENST00000558700 PLCD3Q8N3E9 789 aa11.66□□□□□ -0.54
TRAF3-205ENST00000558700 TRPM1Q7Z4N2 1603 aa11.66□□□□□ -0.54
TRAF3-205ENST00000558700 GJD4Q96KN9 370 aaPredicted RBP11.65□□□□□ -0.54
TRAF3-205ENST00000558700 ZNF692Q9BU19 519 aaPredicted RBP11.65□□□□□ -0.54
TRAF3-205ENST00000558700 BRWD3Q6RI45 1802 aa11.65□□□□□ -0.55
TRAF3-205ENST00000558700 NGDNQ8NEJ9 315 aaKnown RBP11.64□□□□□ -0.55
TRAF3-205ENST00000558700 CABLES1Q8TDN4 633 aa11.64□□□□□ -0.55
TRAF3-205ENST00000558700 PLEKHG5O94827 1062 aa11.63□□□□□ -0.55
TRAF3-205ENST00000558700 PAXIP1Q6ZW49 1069 aaPredicted RBP11.63□□□□□ -0.55
TRAF3-205ENST00000558700 POLR3AO14802 1390 aaPredicted RBP11.62□□□□□ -0.55
TRAF3-205ENST00000558700 NRKQ7Z2Y5 1582 aa11.62□□□□□ -0.55
TRAF3-205ENST00000558700 VPS72Q15906 364 aa11.61□□□□□ -0.55
TRAF3-205ENST00000558700 NUDT16Q96DE0 195 aaKnown RBP11.61□□□□□ -0.55
TRAF3-205ENST00000558700 CFAP44Q96MT7 982 aa11.61□□□□□ -0.55
TRAF3-205ENST00000558700 TAOK2Q9UL54 1235 aa11.61□□□□□ -0.55
TRAF3-205ENST00000558700 CENPJQ9HC77 1338 aaPredicted RBP11.6□□□□□ -0.55
TRAF3-205ENST00000558700 PAK3O75914 559 aaPredicted RBP11.6□□□□□ -0.55
TRAF3-205ENST00000558700 CCDC9Q9Y3X0 531 aaKnown RBP11.6□□□□□ -0.55
TRAF3-205ENST00000558700 NBPF1Q3BBV0 1214 aa11.59□□□□□ -0.55
TRAF3-205ENST00000558700 CDK19Q9BWU1 502 aa11.59□□□□□ -0.55
TRAF3-205ENST00000558700 PPIP5K1Q6PFW1 1433 aa11.59□□□□□ -0.55
TRAF3-205ENST00000558700 THSD7AQ9UPZ6 1657 aa11.59□□□□□ -0.55
TRAF3-205ENST00000558700 CCDC61Q9Y6R9 512 aa11.58□□□□□ -0.56
TRAF3-205ENST00000558700 BLMP54132 1417 aaPredicted RBP11.58□□□□□ -0.56
TRAF3-205ENST00000558700 EP400Q96L91 3159 aa11.58□□□□□ -0.56
TRAF3-205ENST00000558700 ACEP12821 1306 aa11.58□□□□□ -0.56
TRAF3-205ENST00000558700 ROCK2O75116 1388 aaKnown RBP11.57□□□□□ -0.56
TRAF3-205ENST00000558700 FAM83GA6ND36 823 aa11.57□□□□□ -0.56
TRAF3-205ENST00000558700 SPDYE2BA6NHP3 402 aa11.57□□□□□ -0.56
TRAF3-205ENST00000558700 SPDYE6P0CI01 402 aa11.57□□□□□ -0.56
TRAF3-205ENST00000558700 SRPK2P78362 688 aaKnown RBP11.57□□□□□ -0.56
TRAF3-205ENST00000558700 SPDYE2Q495Y8 402 aa11.57□□□□□ -0.56
TRAF3-205ENST00000558700 CCDC125Q86Z20 511 aa11.57□□□□□ -0.56
TRAF3-205ENST00000558700 MIER1Q8N108 512 aa11.57□□□□□ -0.56
TRAF3-205ENST00000558700 L3MBTL2Q969R5 705 aa11.57□□□□□ -0.56
TRAF3-205ENST00000558700 PRDM11Q9NQV5 511 aa11.57□□□□□ -0.56
TRAF3-205ENST00000558700 BRD4O60885 1362 aaPredicted RBP11.56□□□□□ -0.56
TRAF3-205ENST00000558700 A0A0G2JS52 829 aa11.56□□□□□ -0.56
TRAF3-205ENST00000558700 PLEKHG3A1L390 1219 aa11.56□□□□□ -0.56
TRAF3-205ENST00000558700 RGPD1P0DJD0 1748 aa11.56□□□□□ -0.56
TRAF3-205ENST00000558700 MYT1Q01538 1121 aa11.56□□□□□ -0.56
TRAF3-205ENST00000558700 SEPT12Q8IYM1 358 aa11.56□□□□□ -0.56
TRAF3-205ENST00000558700 BTG4Q9NY30 223 aa11.56□□□□□ -0.56
TRAF3-205ENST00000558700 LMO7Q8WWI1 1683 aa11.55□□□□□ -0.56
TRAF3-205ENST00000558700 KIAA0232Q92628 1395 aa11.55□□□□□ -0.56
TRAF3-205ENST00000558700 AKAP12Q02952 1782 aa11.55□□□□□ -0.56
TRAF3-205ENST00000558700 USP6P35125 1406 aa11.54□□□□□ -0.56
TRAF3-205ENST00000558700 PRKCSHP14314 528 aaPredicted RBP11.54□□□□□ -0.56
TRAF3-205ENST00000558700 SPRYD3Q8NCJ5 442 aa11.54□□□□□ -0.56
TRAF3-205ENST00000558700 PIK3C2AO00443 1686 aa11.54□□□□□ -0.56
TRAF3-205ENST00000558700 USP19O94966 1318 aa11.54□□□□□ -0.56
TRAF3-205ENST00000558700 ONECUT3O60422 494 aaPredicted RBP11.53□□□□□ -0.56
TRAF3-205ENST00000558700 SF3B2Q13435 895 aaKnown RBP11.53□□□□□ -0.56
TRAF3-205ENST00000558700 NBPF8Q3BBV2 869 aa11.53□□□□□ -0.56
TRAF3-205ENST00000558700 KRT27Q7Z3Y8 459 aa11.53□□□□□ -0.56
TRAF3-205ENST00000558700 SIN3AQ96ST3 1273 aa11.53□□□□□ -0.56
TRAF3-205ENST00000558700 SPATA31A5Q5VU36 1347 aa11.53□□□□□ -0.56
TRAF3-205ENST00000558700 EVC2Q86UK5 1308 aa11.53□□□□□ -0.56
TRAF3-205ENST00000558700 SPATA31A7Q8IWB4 1347 aa11.53□□□□□ -0.56
TRAF3-205ENST00000558700 CPDO75976 1380 aa11.53□□□□□ -0.56
TRAF3-205ENST00000558700 MON2Q7Z3U7 1717 aa11.52□□□□□ -0.56
TRAF3-205ENST00000558700 SLIT3O75094 1523 aa11.52□□□□□ -0.57
TRAF3-205ENST00000558700 NEUROD1Q13562 356 aa11.52□□□□□ -0.57
TRAF3-205ENST00000558700 FAM98CQ17RN3 349 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms