RNA–Protein interactions for RNA: ENST00000558196.1

SEC11A-204, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 3

Gene SEC11A, Length 540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-204ENST00000558196 FOXO3O43524 673 aa11.62□□□□□ -0.55
SEC11A-204ENST00000558196 C14orf93Q9H972 538 aaKnown RBP11.62□□□□□ -0.55
SEC11A-204ENST00000558196 STK26Q9P289 416 aa11.62□□□□□ -0.55
SEC11A-204ENST00000558196 USP21Q9UK80 565 aa11.62□□□□□ -0.55
SEC11A-204ENST00000558196 MAP3K13O43283 966 aa11.61□□□□□ -0.55
SEC11A-204ENST00000558196 RNF25Q96BH1 459 aaPredicted RBP11.61□□□□□ -0.55
SEC11A-204ENST00000558196 KIF12Q96FN5 646 aa11.61□□□□□ -0.55
SEC11A-204ENST00000558196 TRPC5Q9UL62 973 aaPredicted RBP11.61□□□□□ -0.55
SEC11A-204ENST00000558196 PIK3C2GO75747 1445 aa11.6□□□□□ -0.55
SEC11A-204ENST00000558196 PLEKHH1Q9ULM0 1364 aa11.6□□□□□ -0.55
SEC11A-204ENST00000558196 RGS12O14924 1447 aa11.6□□□□□ -0.55
SEC11A-204ENST00000558196 CDC42BPGQ6DT37 1551 aa11.59□□□□□ -0.55
SEC11A-204ENST00000558196 MYOM2P54296 1465 aa11.59□□□□□ -0.55
SEC11A-204ENST00000558196 PXDNQ92626 1479 aa11.59□□□□□ -0.55
SEC11A-204ENST00000558196 YTHDC2Q9H6S0 1430 aaKnown RBP11.59□□□□□ -0.55
SEC11A-204ENST00000558196 NUTM2FA1L443 756 aa11.58□□□□□ -0.56
SEC11A-204ENST00000558196 CHRM1P11229 460 aaPredicted RBP11.58□□□□□ -0.56
SEC11A-204ENST00000558196 ATRNO75882 1429 aa11.58□□□□□ -0.56
SEC11A-204ENST00000558196 BCL9LQ86UU0 1499 aa11.57□□□□□ -0.56
SEC11A-204ENST00000558196 XPCQ01831 940 aaPredicted RBP11.57□□□□□ -0.56
SEC11A-204ENST00000558196 CFAP70Q5T0N1 1121 aa11.57□□□□□ -0.56
SEC11A-204ENST00000558196 EP400Q96L91 3159 aa11.57□□□□□ -0.56
SEC11A-204ENST00000558196 SPATA31A3Q5VYP0 1347 aa11.57□□□□□ -0.56
SEC11A-204ENST00000558196 NRXN1Q9ULB1 1477 aa11.57□□□□□ -0.56
SEC11A-204ENST00000558196 COL22A1Q8NFW1 1626 aaPredicted RBP11.57□□□□□ -0.56
SEC11A-204ENST00000558196 KRT28Q7Z3Y7 464 aa11.56□□□□□ -0.56
SEC11A-204ENST00000558196 MS4A3Q96HJ5 214 aa11.56□□□□□ -0.56
SEC11A-204ENST00000558196 PCDHB8Q9UN66 801 aa11.56□□□□□ -0.56
SEC11A-204ENST00000558196 PCDHB13Q9Y5F0 798 aa11.56□□□□□ -0.56
SEC11A-204ENST00000558196 DHX57Q6P158 1386 aaKnown RBP11.55□□□□□ -0.56
SEC11A-204ENST00000558196 GJD4Q96KN9 370 aaPredicted RBP11.55□□□□□ -0.56
SEC11A-204ENST00000558196 IFNL1Q8IU54 200 aa11.54□□□□□ -0.56
SEC11A-204ENST00000558196 PHF8Q9UPP1 1060 aa11.54□□□□□ -0.56
SEC11A-204ENST00000558196 IFT172Q9UG01 1749 aa11.54□□□□□ -0.56
SEC11A-204ENST00000558196 ATAD2Q6PL18 1390 aa11.54□□□□□ -0.56
SEC11A-204ENST00000558196 UNC5CLQ8IV45 518 aa11.53□□□□□ -0.56
SEC11A-204ENST00000558196 GALR2O43603 387 aaPredicted RBP11.52□□□□□ -0.57
SEC11A-204ENST00000558196 HRCP23327 699 aa11.52□□□□□ -0.57
SEC11A-204ENST00000558196 PSME1Q06323 249 aa11.52□□□□□ -0.57
SEC11A-204ENST00000558196 CCDC125Q86Z20 511 aa11.52□□□□□ -0.57
SEC11A-204ENST00000558196 PRAM1Q96QH2 718 aa11.52□□□□□ -0.57
SEC11A-204ENST00000558196 RAB3GAP2Q9H2M9 1393 aa11.52□□□□□ -0.57
SEC11A-204ENST00000558196 KNDC1Q76NI1 1749 aa11.52□□□□□ -0.57
SEC11A-204ENST00000558196 STAC3Q96MF2 364 aa11.51□□□□□ -0.57
SEC11A-204ENST00000558196 TRPC6Q9Y210 931 aa11.51□□□□□ -0.57
SEC11A-204ENST00000558196 SBNO1A3KN83 1393 aa11.51□□□□□ -0.57
SEC11A-204ENST00000558196 SLIT2O94813 1529 aa11.5□□□□□ -0.57
SEC11A-204ENST00000558196 ONECUT3O60422 494 aaPredicted RBP11.5□□□□□ -0.57
SEC11A-204ENST00000558196 GABBR2O75899 941 aa11.5□□□□□ -0.57
SEC11A-204ENST00000558196 FMN2Q9NZ56 1722 aa11.49□□□□□ -0.57
SEC11A-204ENST00000558196 RIOK3O14730 519 aaKnown RBP11.49□□□□□ -0.57
SEC11A-204ENST00000558196 SP7Q8TDD2 431 aaPredicted RBP11.49□□□□□ -0.57
SEC11A-204ENST00000558196 POGKQ9P215 609 aa11.49□□□□□ -0.57
SEC11A-204ENST00000558196 DLC1Q96QB1 1528 aa11.49□□□□□ -0.57
SEC11A-204ENST00000558196 SAFB2Q14151 953 aaKnown RBP eCLIP11.48□□□□□ -0.57
SEC11A-204ENST00000558196 VPS72Q15906 364 aa11.48□□□□□ -0.57
SEC11A-204ENST00000558196 CABLES1Q8TDN4 633 aa11.48□□□□□ -0.57
SEC11A-204ENST00000558196 TNS3Q68CZ2 1445 aa11.48□□□□□ -0.57
SEC11A-204ENST00000558196 ANKARQ7Z5J8 1434 aa11.47□□□□□ -0.57
SEC11A-204ENST00000558196 PMFBP1Q8TBY8 1022 aa11.47□□□□□ -0.57
SEC11A-204ENST00000558196 DCAF11Q8TEB1 546 aa11.47□□□□□ -0.57
SEC11A-204ENST00000558196 TRAK1Q9UPV9 953 aa11.47□□□□□ -0.57
SEC11A-204ENST00000558196 KIF1AQ12756 1690 aa11.46□□□□□ -0.57
SEC11A-204ENST00000558196 ADGRB1O14514 1584 aa11.46□□□□□ -0.57
SEC11A-204ENST00000558196 RALGAPBQ86X10 1494 aa11.46□□□□□ -0.57
SEC11A-204ENST00000558196 ARHGEF10O15013 1369 aa11.46□□□□□ -0.57
SEC11A-204ENST00000558196 FAM83GA6ND36 823 aa11.46□□□□□ -0.57
SEC11A-204ENST00000558196 WASLO00401 505 aaPredicted RBP11.46□□□□□ -0.57
SEC11A-204ENST00000558196 ZNF467Q7Z7K2 595 aaPredicted RBP11.46□□□□□ -0.57
SEC11A-204ENST00000558196 SGIP1Q9BQI5 828 aa11.46□□□□□ -0.57
SEC11A-204ENST00000558196 PRR36Q9H6K5 1346 aa11.45□□□□□ -0.58
SEC11A-204ENST00000558196 KDM2AQ9Y2K7 1162 aa11.45□□□□□ -0.58
SEC11A-204ENST00000558196 MARF1Q9Y4F3 1742 aaKnown RBP11.44□□□□□ -0.58
SEC11A-204ENST00000558196 SEPT12Q8IYM1 358 aa11.44□□□□□ -0.58
SEC11A-204ENST00000558196 HIRIP3Q9BW71 556 aaPredicted RBP11.44□□□□□ -0.58
SEC11A-204ENST00000558196 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.43□□□□□ -0.58
SEC11A-204ENST00000558196 MINK1Q8N4C8 1332 aaPredicted RBP11.43□□□□□ -0.58
SEC11A-204ENST00000558196 GLI3P10071 1580 aa11.43□□□□□ -0.58
SEC11A-204ENST00000558196 HAP1P54257 671 aaPredicted RBP11.43□□□□□ -0.58
SEC11A-204ENST00000558196 LMOD2Q6P5Q4 547 aa11.43□□□□□ -0.58
SEC11A-204ENST00000558196 USP32Q8NFA0 1604 aa11.42□□□□□ -0.58
SEC11A-204ENST00000558196 ADGRB2O60241 1585 aa11.42□□□□□ -0.58
SEC11A-204ENST00000558196 BLMP54132 1417 aaPredicted RBP11.42□□□□□ -0.58
SEC11A-204ENST00000558196 EIF3AQ14152 1382 aaKnown RBP11.41□□□□□ -0.58
SEC11A-204ENST00000558196 GPRASP1Q5JY77 1395 aa11.41□□□□□ -0.58
SEC11A-204ENST00000558196 RGPD8O14715 1765 aaPredicted RBP11.41□□□□□ -0.58
SEC11A-204ENST00000558196 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.41□□□□□ -0.58
SEC11A-204ENST00000558196 ZFP91Q96JP5 570 aaPredicted RBP11.41□□□□□ -0.58
SEC11A-204ENST00000558196 KRT27Q7Z3Y8 459 aa11.4□□□□□ -0.58
SEC11A-204ENST00000558196 BTG4Q9NY30 223 aa11.4□□□□□ -0.58
SEC11A-204ENST00000558196 PSEN1P49768 467 aa11.39□□□□□ -0.59
SEC11A-204ENST00000558196 NGDNQ8NEJ9 315 aaKnown RBP11.39□□□□□ -0.59
SEC11A-204ENST00000558196 NUDT16Q96DE0 195 aaKnown RBP11.39□□□□□ -0.59
SEC11A-204ENST00000558196 TULP4Q9NRJ4 1543 aa11.39□□□□□ -0.59
SEC11A-204ENST00000558196 PDAP1Q13442 181 aaKnown RBP11.38□□□□□ -0.59
SEC11A-204ENST00000558196 DEFB132Q7Z7B7 95 aa11.38□□□□□ -0.59
SEC11A-204ENST00000558196 CDK19Q9BWU1 502 aa11.38□□□□□ -0.59
SEC11A-204ENST00000558196 CCDC9Q9Y3X0 531 aaKnown RBP11.38□□□□□ -0.59
SEC11A-204ENST00000558196 PLEKHG3A1L390 1219 aa11.37□□□□□ -0.59
SEC11A-204ENST00000558196 FAM98CQ17RN3 349 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms