RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 ITSN1Q15811 1721 aa12.61□□□□□ -0.39
SNRPA1-206ENST00000558059 CENPJQ9HC77 1338 aaPredicted RBP12.61□□□□□ -0.39
SNRPA1-206ENST00000558059 USP21Q9UK80 565 aa12.6□□□□□ -0.39
SNRPA1-206ENST00000558059 GPRASP1Q5JY77 1395 aa12.59□□□□□ -0.39
SNRPA1-206ENST00000558059 QRICH2Q9H0J4 1663 aa12.59□□□□□ -0.39
SNRPA1-206ENST00000558059 RBM6P78332 1123 aaKnown RBP12.59□□□□□ -0.39
SNRPA1-206ENST00000558059 LMOD2Q6P5Q4 547 aa12.59□□□□□ -0.39
SNRPA1-206ENST00000558059 NGDNQ8NEJ9 315 aaKnown RBP12.59□□□□□ -0.39
SNRPA1-206ENST00000558059 CABLES1Q8TDN4 633 aa12.59□□□□□ -0.39
SNRPA1-206ENST00000558059 ARHGEF10O15013 1369 aa12.58□□□□□ -0.4
SNRPA1-206ENST00000558059 ALS2Q96Q42 1657 aa12.58□□□□□ -0.4
SNRPA1-206ENST00000558059 CCDC61Q9Y6R9 512 aa12.58□□□□□ -0.4
SNRPA1-206ENST00000558059 BCL9LQ86UU0 1499 aa12.58□□□□□ -0.4
SNRPA1-206ENST00000558059 CDK12Q9NYV4 1490 aaPredicted RBP12.58□□□□□ -0.4
SNRPA1-206ENST00000558059 TOPAZ1Q8N9V7 1692 aa12.57□□□□□ -0.4
SNRPA1-206ENST00000558059 ROCK2O75116 1388 aaKnown RBP12.57□□□□□ -0.4
SNRPA1-206ENST00000558059 ABCA3Q99758 1704 aa12.57□□□□□ -0.4
SNRPA1-206ENST00000558059 PLEKHG3A1L390 1219 aa12.57□□□□□ -0.4
SNRPA1-206ENST00000558059 TRPC5Q9UL62 973 aaPredicted RBP12.57□□□□□ -0.4
SNRPA1-206ENST00000558059 ATF5Q9Y2D1 282 aaPredicted RBP12.57□□□□□ -0.4
SNRPA1-206ENST00000558059 POLR3AO14802 1390 aaPredicted RBP12.56□□□□□ -0.4
SNRPA1-206ENST00000558059 ATRNO75882 1429 aa12.56□□□□□ -0.4
SNRPA1-206ENST00000558059 PLEKHG5O94827 1062 aa12.56□□□□□ -0.4
SNRPA1-206ENST00000558059 CABP2Q9NPB3 220 aa12.56□□□□□ -0.4
SNRPA1-206ENST00000558059 FOXD4L1Q9NU39 408 aa12.56□□□□□ -0.4
SNRPA1-206ENST00000558059 SLIT2O94813 1529 aa12.56□□□□□ -0.4
SNRPA1-206ENST00000558059 ACEP12821 1306 aa12.56□□□□□ -0.4
SNRPA1-206ENST00000558059 TONSLQ96HA7 1378 aa12.56□□□□□ -0.4
SNRPA1-206ENST00000558059 SRPK2P78362 688 aaKnown RBP12.55□□□□□ -0.4
SNRPA1-206ENST00000558059 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.54□□□□□ -0.4
SNRPA1-206ENST00000558059 PAK3O75914 559 aaPredicted RBP12.54□□□□□ -0.4
SNRPA1-206ENST00000558059 HAP1P54257 671 aaPredicted RBP12.54□□□□□ -0.4
SNRPA1-206ENST00000558059 RGS12O14924 1447 aa12.54□□□□□ -0.4
SNRPA1-206ENST00000558059 FAM83GA6ND36 823 aa12.53□□□□□ -0.4
SNRPA1-206ENST00000558059 UNC5CLQ8IV45 518 aa12.53□□□□□ -0.4
SNRPA1-206ENST00000558059 CRYBG1Q9Y4K1 1723 aa12.53□□□□□ -0.4
SNRPA1-206ENST00000558059 PPIP5K1Q6PFW1 1433 aa12.53□□□□□ -0.4
SNRPA1-206ENST00000558059 RALGAPBQ86X10 1494 aa12.53□□□□□ -0.4
SNRPA1-206ENST00000558059 EVC2Q86UK5 1308 aa12.52□□□□□ -0.41
SNRPA1-206ENST00000558059 NWD2Q9ULI1 1742 aa12.51□□□□□ -0.41
SNRPA1-206ENST00000558059 UPF1Q92900 1129 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNRPA1-206ENST00000558059 AKT1S1Q96B36 256 aa12.51□□□□□ -0.41
SNRPA1-206ENST00000558059 GJD4Q96KN9 370 aaPredicted RBP12.51□□□□□ -0.41
SNRPA1-206ENST00000558059 CARD11Q9BXL7 1154 aa12.51□□□□□ -0.41
SNRPA1-206ENST00000558059 CABP1Q9NZU7 370 aa12.51□□□□□ -0.41
SNRPA1-206ENST00000558059 PLCH1Q4KWH8 1693 aa12.51□□□□□ -0.41
SNRPA1-206ENST00000558059 ZBTB12Q9Y330 459 aaPredicted RBP12.5□□□□□ -0.41
SNRPA1-206ENST00000558059 GLI3P10071 1580 aa12.49□□□□□ -0.41
SNRPA1-206ENST00000558059 SBNO2Q9Y2G9 1366 aa12.49□□□□□ -0.41
SNRPA1-206ENST00000558059 NUTM2GQ5VZR2 741 aa12.49□□□□□ -0.41
SNRPA1-206ENST00000558059 EP400Q96L91 3159 aa12.48□□□□□ -0.41
SNRPA1-206ENST00000558059 VPS72Q15906 364 aa12.48□□□□□ -0.41
SNRPA1-206ENST00000558059 PCGF6Q9BYE7 350 aa12.48□□□□□ -0.41
SNRPA1-206ENST00000558059 COL14A1Q05707 1796 aaKnown RBP12.48□□□□□ -0.41
SNRPA1-206ENST00000558059 BRD4O60885 1362 aaPredicted RBP12.47□□□□□ -0.41
SNRPA1-206ENST00000558059 ABTB2Q8N961 1025 aa12.47□□□□□ -0.41
SNRPA1-206ENST00000558059 BTG4Q9NY30 223 aa12.47□□□□□ -0.41
SNRPA1-206ENST00000558059 NRAPQ86VF7 1730 aa12.47□□□□□ -0.41
SNRPA1-206ENST00000558059 PHRF1Q9P1Y6 1649 aaKnown RBP12.47□□□□□ -0.41
SNRPA1-206ENST00000558059 USP6P35125 1406 aa12.46□□□□□ -0.41
SNRPA1-206ENST00000558059 SSH2Q76I76 1423 aa12.46□□□□□ -0.41
SNRPA1-206ENST00000558059 AKAP12Q02952 1782 aa12.46□□□□□ -0.42
SNRPA1-206ENST00000558059 KIAA0232Q92628 1395 aa12.45□□□□□ -0.42
SNRPA1-206ENST00000558059 USP19O94966 1318 aa12.45□□□□□ -0.42
SNRPA1-206ENST00000558059 ONECUT3O60422 494 aaPredicted RBP12.45□□□□□ -0.42
SNRPA1-206ENST00000558059 ZC3H6P61129 1189 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-206ENST00000558059 PRDM11Q9NQV5 511 aa12.45□□□□□ -0.42
SNRPA1-206ENST00000558059 BRWD3Q6RI45 1802 aa12.45□□□□□ -0.42
SNRPA1-206ENST00000558059 ATAD2Q6PL18 1390 aa12.44□□□□□ -0.42
SNRPA1-206ENST00000558059 CLSPNQ9HAW4 1339 aa12.44□□□□□ -0.42
SNRPA1-206ENST00000558059 CHRNA2Q15822 529 aa12.44□□□□□ -0.42
SNRPA1-206ENST00000558059 NLRP13Q86W25 1043 aa12.44□□□□□ -0.42
SNRPA1-206ENST00000558059 ZNF692Q9BU19 519 aaPredicted RBP12.44□□□□□ -0.42
SNRPA1-206ENST00000558059 TESK2Q96S53 571 aa12.43□□□□□ -0.42
SNRPA1-206ENST00000558059 CCDC9Q9Y3X0 531 aaKnown RBP12.43□□□□□ -0.42
SNRPA1-206ENST00000558059 CPSF1Q10570 1443 aaKnown RBP12.43□□□□□ -0.42
SNRPA1-206ENST00000558059 NRKQ7Z2Y5 1582 aa12.43□□□□□ -0.42
SNRPA1-206ENST00000558059 TTC21BQ7Z4L5 1316 aa12.42□□□□□ -0.42
SNRPA1-206ENST00000558059 ST20-MTHFSA0A0A6YYL1 179 aa12.42□□□□□ -0.42
SNRPA1-206ENST00000558059 GCP02774 474 aa12.42□□□□□ -0.42
SNRPA1-206ENST00000558059 SEPT12Q8IYM1 358 aa12.42□□□□□ -0.42
SNRPA1-206ENST00000558059 TIMELESSQ9UNS1 1208 aa12.42□□□□□ -0.42
SNRPA1-206ENST00000558059 CPDO75976 1380 aa12.42□□□□□ -0.42
SNRPA1-206ENST00000558059 PIK3C2AO00443 1686 aa12.42□□□□□ -0.42
SNRPA1-206ENST00000558059 SPATA31A5Q5VU36 1347 aa12.41□□□□□ -0.42
SNRPA1-206ENST00000558059 SPATA31A7Q8IWB4 1347 aa12.41□□□□□ -0.42
SNRPA1-206ENST00000558059 NLRP6P59044 892 aa12.41□□□□□ -0.42
SNRPA1-206ENST00000558059 PUS7Q96PZ0 661 aaKnown RBP12.41□□□□□ -0.42
SNRPA1-206ENST00000558059 SLC12A5Q9H2X9 1139 aa12.4□□□□□ -0.42
SNRPA1-206ENST00000558059 CAMTA1Q9Y6Y1 1673 aa12.4□□□□□ -0.42
SNRPA1-206ENST00000558059 SLIT3O75094 1523 aa12.4□□□□□ -0.42
SNRPA1-206ENST00000558059 KTN1Q86UP2 1357 aaKnown RBP12.4□□□□□ -0.42
SNRPA1-206ENST00000558059 CD163L1Q9NR16 1453 aa12.4□□□□□ -0.43
SNRPA1-206ENST00000558059 MON2Q7Z3U7 1717 aa12.4□□□□□ -0.43
SNRPA1-206ENST00000558059 LMO7Q8WWI1 1683 aa12.39□□□□□ -0.43
SNRPA1-206ENST00000558059 FAM98CQ17RN3 349 aaKnown RBP12.39□□□□□ -0.43
SNRPA1-206ENST00000558059 TTC21AQ8NDW8 1320 aa12.38□□□□□ -0.43
SNRPA1-206ENST00000558059 REM2Q8IYK8 340 aaPredicted RBP12.38□□□□□ -0.43
SNRPA1-206ENST00000558059 TMC1Q8TDI8 760 aa12.38□□□□□ -0.43
SNRPA1-206ENST00000558059 STRN4Q9NRL3 753 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms