RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 C11orf95C9JLR9 678 aaPredicted RBP35.52■■■■□ 3.28
SMAD6-202ENST00000557916 NUTM2BA6NNL0 878 aaPredicted RBP35.5■■■■□ 3.27
SMAD6-202ENST00000557916 NUTM2EB1AL46 878 aaPredicted RBP35.5■■■■□ 3.27
SMAD6-202ENST00000557916 NUTM2AQ8IVF1 878 aaPredicted RBP35.5■■■■□ 3.27
SMAD6-202ENST00000557916 AKAP12Q02952 1782 aa35.5■■■■□ 3.27
SMAD6-202ENST00000557916 COL22A1Q8NFW1 1626 aaPredicted RBP35.49■■■■□ 3.27
SMAD6-202ENST00000557916 ALS2Q96Q42 1657 aa35.48■■■■□ 3.27
SMAD6-202ENST00000557916 A0A1W2PP64 1363 aa35.48■■■■□ 3.27
SMAD6-202ENST00000557916 SSH2Q76I76 1423 aa35.47■■■■□ 3.27
SMAD6-202ENST00000557916 ABTB2Q8N961 1025 aa35.46■■■■□ 3.27
SMAD6-202ENST00000557916 PLEKHG5O94827 1062 aa35.45■■■■□ 3.27
SMAD6-202ENST00000557916 TTC21BQ7Z4L5 1316 aa35.45■■■■□ 3.26
SMAD6-202ENST00000557916 ANKRD36BQ8N2N9 1353 aa35.44■■■■□ 3.26
SMAD6-202ENST00000557916 LRP6O75581 1613 aa35.44■■■■□ 3.26
SMAD6-202ENST00000557916 NUTM2GQ5VZR2 741 aa35.43■■■■□ 3.26
SMAD6-202ENST00000557916 MON2Q7Z3U7 1717 aa35.42■■■■□ 3.26
SMAD6-202ENST00000557916 MED1Q15648 1581 aaPredicted RBP35.42■■■■□ 3.26
SMAD6-202ENST00000557916 CABLES1Q8TDN4 633 aa35.41■■■■□ 3.26
SMAD6-202ENST00000557916 KIF7Q2M1P5 1343 aa35.41■■■■□ 3.26
SMAD6-202ENST00000557916 MYOM1P52179 1685 aa35.41■■■■□ 3.26
SMAD6-202ENST00000557916 TTC21AQ8NDW8 1320 aa35.4■■■■□ 3.26
SMAD6-202ENST00000557916 HAP1P54257 671 aaPredicted RBP35.39■■■■□ 3.26
SMAD6-202ENST00000557916 MEX3CQ5U5Q3 659 aaKnown RBP35.39■■■■□ 3.26
SMAD6-202ENST00000557916 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.39■■■■□ 3.26
SMAD6-202ENST00000557916 EDC4Q6P2E9 1401 aaKnown RBP35.38■■■■□ 3.26
SMAD6-202ENST00000557916 NRKQ7Z2Y5 1582 aa35.38■■■■□ 3.25
SMAD6-202ENST00000557916 ADAMTS2O95450 1211 aa35.37■■■■□ 3.25
SMAD6-202ENST00000557916 NLRP13Q86W25 1043 aa35.36■■■■□ 3.25
SMAD6-202ENST00000557916 NLRP6P59044 892 aa35.35■■■■□ 3.25
SMAD6-202ENST00000557916 CCDC7Q96M83 1385 aa35.32■■■■□ 3.24
SMAD6-202ENST00000557916 PIK3C2AO00443 1686 aa35.31■■■■□ 3.24
SMAD6-202ENST00000557916 WASHC2AQ641Q2 1341 aa35.31■■■■□ 3.24
SMAD6-202ENST00000557916 NME9Q86XW9 330 aa35.3■■■■□ 3.24
SMAD6-202ENST00000557916 CARD14Q9BXL6 1004 aa35.29■■■■□ 3.24
SMAD6-202ENST00000557916 USP19O94966 1318 aa35.28■■■■□ 3.24
SMAD6-202ENST00000557916 ABCA3Q99758 1704 aa35.28■■■■□ 3.24
SMAD6-202ENST00000557916 C8orf37Q96NL8 207 aa35.28■■■■□ 3.24
SMAD6-202ENST00000557916 PHF23Q9BUL5 403 aaPredicted RBP35.28■■■■□ 3.24
SMAD6-202ENST00000557916 PANK3Q9H999 370 aa35.27■■■■□ 3.24
SMAD6-202ENST00000557916 CRYBG1Q9Y4K1 1723 aa35.26■■■■□ 3.24
SMAD6-202ENST00000557916 ZRANB1Q9UGI0 708 aa35.26■■■■□ 3.24
SMAD6-202ENST00000557916 USP31Q70CQ4 1352 aa35.24■■■■□ 3.23
SMAD6-202ENST00000557916 NGLY1Q96IV0 654 aa35.23■■■■□ 3.23
SMAD6-202ENST00000557916 NSD3Q9BZ95 1437 aa35.23■■■■□ 3.23
SMAD6-202ENST00000557916 PHRF1Q9P1Y6 1649 aaKnown RBP35.22■■■■□ 3.23
SMAD6-202ENST00000557916 GCP02774 474 aa35.22■■■■□ 3.23
SMAD6-202ENST00000557916 MARF1Q9Y4F3 1742 aaKnown RBP35.2■■■■□ 3.22
SMAD6-202ENST00000557916 SLIT3O75094 1523 aa35.18■■■■□ 3.22
SMAD6-202ENST00000557916 FYB1O15117 783 aa35.18■■■■□ 3.22
SMAD6-202ENST00000557916 ZC3H6P61129 1189 aaKnown RBP35.18■■■■□ 3.22
SMAD6-202ENST00000557916 AFF2P51816 1311 aa35.17■■■■□ 3.22
SMAD6-202ENST00000557916 KCNH5Q8NCM2 988 aa35.16■■■■□ 3.22
SMAD6-202ENST00000557916 FAM83GA6ND36 823 aa35.15■■■■□ 3.22
SMAD6-202ENST00000557916 COG3Q96JB2 828 aa35.15■■■■□ 3.22
SMAD6-202ENST00000557916 GGNBP2Q9H3C7 697 aa35.15■■■■□ 3.22
SMAD6-202ENST00000557916 PRDM11Q9NQV5 511 aa35.15■■■■□ 3.22
SMAD6-202ENST00000557916 KIAA0232Q92628 1395 aa35.14■■■■□ 3.22
SMAD6-202ENST00000557916 OVOS2A0A0J9YW53 1432 aa35.14■■■■□ 3.22
SMAD6-202ENST00000557916 OVOS2Q6IE36 1432 aa35.14■■■■□ 3.22
SMAD6-202ENST00000557916 SOX12O15370 315 aa35.14■■■■□ 3.22
SMAD6-202ENST00000557916 CGNL1Q0VF96 1302 aa35.14■■■■□ 3.22
SMAD6-202ENST00000557916 USP54Q70EL1 1684 aa35.14■■■■□ 3.22
SMAD6-202ENST00000557916 FNBP4Q8N3X1 1017 aaPredicted RBP35.14■■■■□ 3.22
SMAD6-202ENST00000557916 RGS17Q9UGC6 210 aaPredicted RBP35.14■■■■□ 3.22
SMAD6-202ENST00000557916 ZNF772Q68DY9 489 aaPredicted RBP35.11■■■■□ 3.21
SMAD6-202ENST00000557916 CPDO75976 1380 aa35.1■■■■□ 3.21
SMAD6-202ENST00000557916 USP21Q9UK80 565 aa35.09■■■■□ 3.21
SMAD6-202ENST00000557916 KNSTRNQ9Y448 316 aa35.09■■■■□ 3.21
SMAD6-202ENST00000557916 CHRNA2Q15822 529 aa35.08■■■■□ 3.21
SMAD6-202ENST00000557916 KIF20BQ96Q89 1820 aa35.08■■■■□ 3.21
SMAD6-202ENST00000557916 SLIT2O94813 1529 aa35.07■■■■□ 3.2
SMAD6-202ENST00000557916 ZBTB7CA1YPR0 619 aa35.06■■■■□ 3.2
SMAD6-202ENST00000557916 NFAT5O94916 1531 aa35.05■■■■□ 3.2
SMAD6-202ENST00000557916 COL14A1Q05707 1796 aaKnown RBP35.05■■■■□ 3.2
SMAD6-202ENST00000557916 BTG4Q9NY30 223 aa35.04■■■■□ 3.2
SMAD6-202ENST00000557916 BCL9LQ86UU0 1499 aa35.04■■■■□ 3.2
SMAD6-202ENST00000557916 ARHGEF25Q86VW2 580 aa35.03■■■■□ 3.2
SMAD6-202ENST00000557916 PLCH1Q4KWH8 1693 aa35.02■■■■□ 3.2
SMAD6-202ENST00000557916 PER1O15534 1290 aaPredicted RBP35.02■■■■□ 3.2
SMAD6-202ENST00000557916 UNC5CLQ8IV45 518 aa35.02■■■■□ 3.2
SMAD6-202ENST00000557916 POTEAQ6S8J7 498 aa35■■■■□ 3.19
SMAD6-202ENST00000557916 QTRT2Q9H974 415 aaKnown RBP34.99■■■■□ 3.19
SMAD6-202ENST00000557916 NSD2O96028 1365 aa34.98■■■■□ 3.19
SMAD6-202ENST00000557916 AATKQ6ZMQ8 1374 aa34.98■■■■□ 3.19
SMAD6-202ENST00000557916 NWD2Q9ULI1 1742 aa34.97■■■■□ 3.19
SMAD6-202ENST00000557916 FBLN1P23142 703 aa34.97■■■■□ 3.19
SMAD6-202ENST00000557916 AMER1Q5JTC6 1135 aaPredicted RBP34.97■■■■□ 3.19
SMAD6-202ENST00000557916 TRPC5Q9UL62 973 aaPredicted RBP34.97■■■■□ 3.19
SMAD6-202ENST00000557916 LMO7Q8WWI1 1683 aa34.93■■■■□ 3.18
SMAD6-202ENST00000557916 CAMTA1Q9Y6Y1 1673 aa34.93■■■■□ 3.18
SMAD6-202ENST00000557916 ATRNO75882 1429 aa34.92■■■■□ 3.18
SMAD6-202ENST00000557916 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.92■■■■□ 3.18
SMAD6-202ENST00000557916 AXIN2Q9Y2T1 843 aa34.91■■■■□ 3.18
SMAD6-202ENST00000557916 EVA1CP58658 441 aa34.9■■■■□ 3.18
SMAD6-202ENST00000557916 STRN4Q9NRL3 753 aa34.9■■■■□ 3.18
SMAD6-202ENST00000557916 NRAPQ86VF7 1730 aa34.9■■■■□ 3.18
SMAD6-202ENST00000557916 MAP3K19Q56UN5 1328 aa34.9■■■■□ 3.18
SMAD6-202ENST00000557916 ZNF316A6NFI3 1004 aaPredicted RBP34.89■■■■□ 3.18
SMAD6-202ENST00000557916 RRS1Q15050 365 aaKnown RBP34.89■■■■□ 3.18
SMAD6-202ENST00000557916 VPS72Q15906 364 aa34.89■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms