RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 KIF20BQ96Q89 1820 aa14.18□□□□□ -0.14
GABRB3-213ENST00000557765 FYB1O15117 783 aa14.17□□□□□ -0.14
GABRB3-213ENST00000557765 MORC1Q86VD1 984 aa14.17□□□□□ -0.14
GABRB3-213ENST00000557765 COG3Q96JB2 828 aa14.17□□□□□ -0.14
GABRB3-213ENST00000557765 SBNO1A3KN83 1393 aa14.17□□□□□ -0.14
GABRB3-213ENST00000557765 TTC21BQ7Z4L5 1316 aa14.16□□□□□ -0.14
GABRB3-213ENST00000557765 XIRP1Q702N8 1843 aaKnown RBP14.16□□□□□ -0.14
GABRB3-213ENST00000557765 ESCO1Q5FWF5 840 aa14.16□□□□□ -0.14
GABRB3-213ENST00000557765 CFAP53Q96M91 514 aa14.15□□□□□ -0.14
GABRB3-213ENST00000557765 SLAIN2Q9P270 581 aa14.15□□□□□ -0.14
GABRB3-213ENST00000557765 NGEFQ8N5V2 710 aa14.14□□□□□ -0.15
GABRB3-213ENST00000557765 OVOS2A0A0J9YW53 1432 aa14.14□□□□□ -0.15
GABRB3-213ENST00000557765 OVOS2Q6IE36 1432 aa14.14□□□□□ -0.15
GABRB3-213ENST00000557765 ARHGEF10O15013 1369 aa14.13□□□□□ -0.15
GABRB3-213ENST00000557765 CC2D1BQ5T0F9 858 aaKnown RBP14.13□□□□□ -0.15
GABRB3-213ENST00000557765 KCNH5Q8NCM2 988 aa14.13□□□□□ -0.15
GABRB3-213ENST00000557765 SMG6Q86US8 1419 aaKnown RBP14.13□□□□□ -0.15
GABRB3-213ENST00000557765 TOM1O60784 492 aa14.12□□□□□ -0.15
GABRB3-213ENST00000557765 PPP2R1AP30153 589 aa14.12□□□□□ -0.15
GABRB3-213ENST00000557765 PNNQ9H307 717 aaKnown RBP14.11□□□□□ -0.15
GABRB3-213ENST00000557765 MRS2Q9HD23 443 aa14.11□□□□□ -0.15
GABRB3-213ENST00000557765 RGPD8O14715 1765 aaPredicted RBP14.11□□□□□ -0.15
GABRB3-213ENST00000557765 ABCC6O95255 1503 aa14.1□□□□□ -0.15
GABRB3-213ENST00000557765 NCBP3Q53F19 620 aaKnown RBP14.1□□□□□ -0.15
GABRB3-213ENST00000557765 PNPLA6Q8IY17 1366 aa14.09□□□□□ -0.15
GABRB3-213ENST00000557765 PMFBP1Q8TBY8 1022 aa14.09□□□□□ -0.15
GABRB3-213ENST00000557765 RTL1A6NKG5 1358 aa14.09□□□□□ -0.15
GABRB3-213ENST00000557765 CDK12Q9NYV4 1490 aaPredicted RBP14.08□□□□□ -0.16
GABRB3-213ENST00000557765 NUDCQ9Y266 331 aa14.08□□□□□ -0.16
GABRB3-213ENST00000557765 SOS2Q07890 1332 aaPredicted RBP14.08□□□□□ -0.16
GABRB3-213ENST00000557765 BRINP3Q76B58 766 aa14.07□□□□□ -0.16
GABRB3-213ENST00000557765 KRT28Q7Z3Y7 464 aa14.07□□□□□ -0.16
GABRB3-213ENST00000557765 ABTB2Q8N961 1025 aa14.07□□□□□ -0.16
GABRB3-213ENST00000557765 MED1Q15648 1581 aaPredicted RBP14.07□□□□□ -0.16
GABRB3-213ENST00000557765 PHRF1Q9P1Y6 1649 aaKnown RBP14.07□□□□□ -0.16
GABRB3-213ENST00000557765 PLEKHG2Q9H7P9 1386 aa14.07□□□□□ -0.16
GABRB3-213ENST00000557765 TRPM3Q9HCF6 1732 aaPredicted RBP14.07□□□□□ -0.16
GABRB3-213ENST00000557765 TNS3Q68CZ2 1445 aa14.07□□□□□ -0.16
GABRB3-213ENST00000557765 NHSL1Q5SYE7 1610 aa14.06□□□□□ -0.16
GABRB3-213ENST00000557765 AHDC1Q5TGY3 1603 aaPredicted RBP14.06□□□□□ -0.16
GABRB3-213ENST00000557765 NUTM2FA1L443 756 aa14.06□□□□□ -0.16
GABRB3-213ENST00000557765 FOXO3O43524 673 aa14.06□□□□□ -0.16
GABRB3-213ENST00000557765 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.06□□□□□ -0.16
GABRB3-213ENST00000557765 PNISRQ8TF01 805 aaKnown RBP14.06□□□□□ -0.16
GABRB3-213ENST00000557765 ORAI2Q96SN7 254 aa14.06□□□□□ -0.16
GABRB3-213ENST00000557765 GGNBP2Q9H3C7 697 aa14.06□□□□□ -0.16
GABRB3-213ENST00000557765 PXDNQ92626 1479 aa14.06□□□□□ -0.16
GABRB3-213ENST00000557765 PIK3C2AO00443 1686 aa14.05□□□□□ -0.16
GABRB3-213ENST00000557765 NLRP6P59044 892 aa14.05□□□□□ -0.16
GABRB3-213ENST00000557765 USP19O94966 1318 aa14.05□□□□□ -0.16
GABRB3-213ENST00000557765 ALS2Q96Q42 1657 aa14.04□□□□□ -0.16
GABRB3-213ENST00000557765 WDR43Q15061 677 aaKnown RBP eCLIP14.04□□□□□ -0.16
GABRB3-213ENST00000557765 SPATA31A3Q5VYP0 1347 aa14.04□□□□□ -0.16
GABRB3-213ENST00000557765 SLIT3O75094 1523 aa14.04□□□□□ -0.16
GABRB3-213ENST00000557765 NME9Q86XW9 330 aa14.03□□□□□ -0.16
GABRB3-213ENST00000557765 LRRC59Q96AG4 307 aaKnown RBP14.03□□□□□ -0.16
GABRB3-213ENST00000557765 FLT4P35916 1363 aa14.03□□□□□ -0.16
GABRB3-213ENST00000557765 MTHFSP49914 203 aa14.02□□□□□ -0.17
GABRB3-213ENST00000557765 RBM33Q96EV2 1170 aaKnown RBP14.02□□□□□ -0.17
GABRB3-213ENST00000557765 BLMP54132 1417 aaPredicted RBP14.01□□□□□ -0.17
GABRB3-213ENST00000557765 PAK3O75914 559 aaPredicted RBP14.01□□□□□ -0.17
GABRB3-213ENST00000557765 POLKQ9UBT6 870 aa14.01□□□□□ -0.17
GABRB3-213ENST00000557765 CPDO75976 1380 aa14□□□□□ -0.17
GABRB3-213ENST00000557765 DIAPH1O60610 1272 aaKnown RBP13.99□□□□□ -0.17
GABRB3-213ENST00000557765 NEFMP07197 916 aa13.98□□□□□ -0.17
GABRB3-213ENST00000557765 CERKQ8TCT0 537 aa13.98□□□□□ -0.17
GABRB3-213ENST00000557765 ROBO1Q9Y6N7 1651 aa13.98□□□□□ -0.17
GABRB3-213ENST00000557765 NFAT5O94916 1531 aa13.97□□□□□ -0.17
GABRB3-213ENST00000557765 FCHSD2O94868 740 aa13.97□□□□□ -0.17
GABRB3-213ENST00000557765 GCP02774 474 aa13.97□□□□□ -0.17
GABRB3-213ENST00000557765 CENPBP07199 599 aaPredicted RBP13.97□□□□□ -0.17
GABRB3-213ENST00000557765 COL3A1P02461 1466 aaPredicted RBP13.97□□□□□ -0.17
GABRB3-213ENST00000557765 MAP2P11137 1827 aaKnown RBP13.97□□□□□ -0.17
GABRB3-213ENST00000557765 COL22A1Q8NFW1 1626 aaPredicted RBP13.96□□□□□ -0.17
GABRB3-213ENST00000557765 PDE3BQ13370 1112 aa13.95□□□□□ -0.18
GABRB3-213ENST00000557765 IP6K1Q92551 441 aa13.95□□□□□ -0.18
GABRB3-213ENST00000557765 MARF1Q9Y4F3 1742 aaKnown RBP13.95□□□□□ -0.18
GABRB3-213ENST00000557765 ZBED9Q6R2W3 1325 aa13.94□□□□□ -0.18
GABRB3-213ENST00000557765 AMPHP49418 695 aa13.94□□□□□ -0.18
GABRB3-213ENST00000557765 ARHGEF25Q86VW2 580 aa13.94□□□□□ -0.18
GABRB3-213ENST00000557765 MAP3K19Q56UN5 1328 aa13.93□□□□□ -0.18
GABRB3-213ENST00000557765 FAM208AQ9UK61 1670 aaKnown RBP13.92□□□□□ -0.18
GABRB3-213ENST00000557765 UBAP1LF5GYI3 381 aa13.92□□□□□ -0.18
GABRB3-213ENST00000557765 TNNT2P45379 298 aaPredicted RBP13.92□□□□□ -0.18
GABRB3-213ENST00000557765 FAM9BQ8IZU0 186 aa13.92□□□□□ -0.18
GABRB3-213ENST00000557765 RUNDC1Q96C34 613 aa13.92□□□□□ -0.18
GABRB3-213ENST00000557765 CRYBG1Q9Y4K1 1723 aa13.92□□□□□ -0.18
GABRB3-213ENST00000557765 SHPRHQ149N8 1683 aa13.91□□□□□ -0.18
GABRB3-213ENST00000557765 IL13P35225 146 aa13.91□□□□□ -0.18
GABRB3-213ENST00000557765 CCDC27Q2M243 656 aa13.91□□□□□ -0.18
GABRB3-213ENST00000557765 KDRP35968 1356 aa13.91□□□□□ -0.18
GABRB3-213ENST00000557765 HOXC9P31274 260 aa13.9□□□□□ -0.18
GABRB3-213ENST00000557765 ADAMTS8Q9UP79 889 aa13.9□□□□□ -0.18
GABRB3-213ENST00000557765 U2AF1L5P0DN76 240 aaPredicted RBP13.89□□□□□ -0.19
GABRB3-213ENST00000557765 U2AF1Q01081 240 aaKnown RBP eCLIP13.89□□□□□ -0.19
GABRB3-213ENST00000557765 CCDC184Q52MB2 194 aa13.89□□□□□ -0.19
GABRB3-213ENST00000557765 LMOD2Q6P5Q4 547 aa13.89□□□□□ -0.19
GABRB3-213ENST00000557765 EMILIN1Q9Y6C2 1016 aa13.89□□□□□ -0.19
GABRB3-213ENST00000557765 COL16A1Q07092 1604 aaPredicted RBP13.89□□□□□ -0.19
GABRB3-213ENST00000557765 SPATA31A6Q5VVP1 1343 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms