RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 CD163L1Q9NR16 1453 aa13.88□□□□□ -0.19
GABRB3-212ENST00000557641 CC2D1BQ5T0F9 858 aaKnown RBP13.88□□□□□ -0.19
GABRB3-212ENST00000557641 C14orf37Q86TY3 774 aa13.88□□□□□ -0.19
GABRB3-212ENST00000557641 NLRP13Q86W25 1043 aa13.88□□□□□ -0.19
GABRB3-212ENST00000557641 C19orf44Q9H6X5 657 aa13.88□□□□□ -0.19
GABRB3-212ENST00000557641 USP32Q8NFA0 1604 aa13.88□□□□□ -0.19
GABRB3-212ENST00000557641 BRD4O60885 1362 aaPredicted RBP13.87□□□□□ -0.19
GABRB3-212ENST00000557641 DCCP43146 1447 aa13.86□□□□□ -0.19
GABRB3-212ENST00000557641 EDC4Q6P2E9 1401 aaKnown RBP13.86□□□□□ -0.19
GABRB3-212ENST00000557641 MRS2Q9HD23 443 aa13.85□□□□□ -0.19
GABRB3-212ENST00000557641 POLR3AO14802 1390 aaPredicted RBP13.84□□□□□ -0.19
GABRB3-212ENST00000557641 TMEM94Q12767 1356 aa13.84□□□□□ -0.19
GABRB3-212ENST00000557641 MORC1Q86VD1 984 aa13.84□□□□□ -0.19
GABRB3-212ENST00000557641 TOPAZ1Q8N9V7 1692 aa13.83□□□□□ -0.2
GABRB3-212ENST00000557641 CNGB1Q14028 1251 aaPredicted RBP13.83□□□□□ -0.2
GABRB3-212ENST00000557641 FMN2Q9NZ56 1722 aa13.83□□□□□ -0.2
GABRB3-212ENST00000557641 ACEP12821 1306 aa13.83□□□□□ -0.2
GABRB3-212ENST00000557641 NALCNQ8IZF0 1738 aa13.82□□□□□ -0.2
GABRB3-212ENST00000557641 FYB1O15117 783 aa13.82□□□□□ -0.2
GABRB3-212ENST00000557641 ATF3P18847 181 aa13.82□□□□□ -0.2
GABRB3-212ENST00000557641 PPP2R1AP30153 589 aa13.82□□□□□ -0.2
GABRB3-212ENST00000557641 CADPS2Q86UW7 1296 aa13.82□□□□□ -0.2
GABRB3-212ENST00000557641 NGDNQ8NEJ9 315 aaKnown RBP13.82□□□□□ -0.2
GABRB3-212ENST00000557641 MSH6P52701 1360 aa13.82□□□□□ -0.2
GABRB3-212ENST00000557641 ITSN1Q15811 1721 aa13.81□□□□□ -0.2
GABRB3-212ENST00000557641 NUTM2FA1L443 756 aa13.81□□□□□ -0.2
GABRB3-212ENST00000557641 PHF8Q9UPP1 1060 aa13.81□□□□□ -0.2
GABRB3-212ENST00000557641 TTC21AQ8NDW8 1320 aa13.81□□□□□ -0.2
GABRB3-212ENST00000557641 USP6P35125 1406 aa13.81□□□□□ -0.2
GABRB3-212ENST00000557641 RBM33Q96EV2 1170 aaKnown RBP13.8□□□□□ -0.2
GABRB3-212ENST00000557641 ZNF335Q9H4Z2 1342 aaPredicted RBP13.8□□□□□ -0.2
GABRB3-212ENST00000557641 LRRC7Q96NW7 1537 aa13.79□□□□□ -0.2
GABRB3-212ENST00000557641 CCDC184Q52MB2 194 aa13.78□□□□□ -0.2
GABRB3-212ENST00000557641 PMFBP1Q8TBY8 1022 aa13.78□□□□□ -0.2
GABRB3-212ENST00000557641 TTC21BQ7Z4L5 1316 aa13.78□□□□□ -0.2
GABRB3-212ENST00000557641 STRCP1A6NGW2 1772 aa13.77□□□□□ -0.21
GABRB3-212ENST00000557641 ESCO1Q5FWF5 840 aa13.77□□□□□ -0.21
GABRB3-212ENST00000557641 C1orf167Q5SNV9 1468 aa13.77□□□□□ -0.21
GABRB3-212ENST00000557641 SSH2Q76I76 1423 aa13.77□□□□□ -0.21
GABRB3-212ENST00000557641 MON2Q7Z3U7 1717 aa13.77□□□□□ -0.21
GABRB3-212ENST00000557641 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.77□□□□□ -0.21
GABRB3-212ENST00000557641 REM2Q8IYK8 340 aaPredicted RBP13.77□□□□□ -0.21
GABRB3-212ENST00000557641 PNISRQ8TF01 805 aaKnown RBP13.77□□□□□ -0.21
GABRB3-212ENST00000557641 GGNBP2Q9H3C7 697 aa13.77□□□□□ -0.21
GABRB3-212ENST00000557641 AKAP12Q02952 1782 aa13.76□□□□□ -0.21
GABRB3-212ENST00000557641 COG3Q96JB2 828 aa13.76□□□□□ -0.21
GABRB3-212ENST00000557641 MST1RQ04912 1400 aa13.75□□□□□ -0.21
GABRB3-212ENST00000557641 INSRP06213 1382 aa13.75□□□□□ -0.21
GABRB3-212ENST00000557641 USP31Q70CQ4 1352 aa13.74□□□□□ -0.21
GABRB3-212ENST00000557641 CFAP53Q96M91 514 aa13.74□□□□□ -0.21
GABRB3-212ENST00000557641 AATKQ6ZMQ8 1374 aa13.73□□□□□ -0.21
GABRB3-212ENST00000557641 CENPBP07199 599 aaPredicted RBP13.73□□□□□ -0.21
GABRB3-212ENST00000557641 PSME1Q06323 249 aa13.73□□□□□ -0.21
GABRB3-212ENST00000557641 NME9Q86XW9 330 aa13.73□□□□□ -0.21
GABRB3-212ENST00000557641 FAM9BQ8IZU0 186 aa13.73□□□□□ -0.21
GABRB3-212ENST00000557641 YTHDC1Q96MU7 727 aaKnown RBP13.73□□□□□ -0.21
GABRB3-212ENST00000557641 NRKQ7Z2Y5 1582 aa13.72□□□□□ -0.21
GABRB3-212ENST00000557641 ORAI2Q96SN7 254 aa13.72□□□□□ -0.21
GABRB3-212ENST00000557641 ANKRD26Q9UPS8 1709 aa13.72□□□□□ -0.21
GABRB3-212ENST00000557641 KIF1AQ12756 1690 aa13.72□□□□□ -0.21
GABRB3-212ENST00000557641 MTHFSP49914 203 aa13.71□□□□□ -0.21
GABRB3-212ENST00000557641 KIF20BQ96Q89 1820 aa13.71□□□□□ -0.22
GABRB3-212ENST00000557641 TNNT2P45379 298 aaPredicted RBP13.7□□□□□ -0.22
GABRB3-212ENST00000557641 WDR43Q15061 677 aaKnown RBP eCLIP13.7□□□□□ -0.22
GABRB3-212ENST00000557641 OVOS2A0A0J9YW53 1432 aa13.7□□□□□ -0.22
GABRB3-212ENST00000557641 OVOS2Q6IE36 1432 aa13.7□□□□□ -0.22
GABRB3-212ENST00000557641 NPHP3Q7Z494 1330 aa13.69□□□□□ -0.22
GABRB3-212ENST00000557641 RGPD8O14715 1765 aaPredicted RBP13.69□□□□□ -0.22
GABRB3-212ENST00000557641 FOXO3O43524 673 aa13.69□□□□□ -0.22
GABRB3-212ENST00000557641 SLAIN2Q9P270 581 aa13.69□□□□□ -0.22
GABRB3-212ENST00000557641 KRT28Q7Z3Y7 464 aa13.68□□□□□ -0.22
GABRB3-212ENST00000557641 PROM2Q8N271 834 aa13.68□□□□□ -0.22
GABRB3-212ENST00000557641 PAK3O75914 559 aaPredicted RBP13.67□□□□□ -0.22
GABRB3-212ENST00000557641 NLRP6P59044 892 aa13.67□□□□□ -0.22
GABRB3-212ENST00000557641 ABTB2Q8N961 1025 aa13.67□□□□□ -0.22
GABRB3-212ENST00000557641 SPDYE1Q8NFV5 336 aaPredicted RBP13.67□□□□□ -0.22
GABRB3-212ENST00000557641 POLKQ9UBT6 870 aa13.67□□□□□ -0.22
GABRB3-212ENST00000557641 NUDCQ9Y266 331 aa13.67□□□□□ -0.22
GABRB3-212ENST00000557641 PNPLA6Q8IY17 1366 aa13.67□□□□□ -0.22
GABRB3-212ENST00000557641 LTBP4Q8N2S1 1624 aa13.67□□□□□ -0.22
GABRB3-212ENST00000557641 XIRP1Q702N8 1843 aaKnown RBP13.67□□□□□ -0.22
GABRB3-212ENST00000557641 SMG6Q86US8 1419 aaKnown RBP13.66□□□□□ -0.22
GABRB3-212ENST00000557641 ZRANB1Q9UGI0 708 aa13.66□□□□□ -0.22
GABRB3-212ENST00000557641 SBNO1A3KN83 1393 aa13.66□□□□□ -0.22
GABRB3-212ENST00000557641 HNRNPUQ00839 825 aaKnown RBP eCLIP13.65□□□□□ -0.22
GABRB3-212ENST00000557641 BRINP3Q76B58 766 aa13.65□□□□□ -0.22
GABRB3-212ENST00000557641 KCNH5Q8NCM2 988 aa13.65□□□□□ -0.22
GABRB3-212ENST00000557641 KIF24Q5T7B8 1368 aa13.65□□□□□ -0.22
GABRB3-212ENST00000557641 USP54Q70EL1 1684 aa13.64□□□□□ -0.23
GABRB3-212ENST00000557641 ADAMTS8Q9UP79 889 aa13.64□□□□□ -0.23
GABRB3-212ENST00000557641 CDK12Q9NYV4 1490 aaPredicted RBP13.63□□□□□ -0.23
GABRB3-212ENST00000557641 DIAPH1O60610 1272 aaKnown RBP13.63□□□□□ -0.23
GABRB3-212ENST00000557641 NGEFQ8N5V2 710 aa13.63□□□□□ -0.23
GABRB3-212ENST00000557641 PNNQ9H307 717 aaKnown RBP13.62□□□□□ -0.23
GABRB3-212ENST00000557641 CLEC11AQ9Y240 323 aa13.62□□□□□ -0.23
GABRB3-212ENST00000557641 BLMP54132 1417 aaPredicted RBP13.62□□□□□ -0.23
GABRB3-212ENST00000557641 PIK3C2AO00443 1686 aa13.62□□□□□ -0.23
GABRB3-212ENST00000557641 ZBED9Q6R2W3 1325 aa13.62□□□□□ -0.23
GABRB3-212ENST00000557641 ARHGEF10O15013 1369 aa13.61□□□□□ -0.23
GABRB3-212ENST00000557641 EMILIN1Q9Y6C2 1016 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms