RNA–Protein interactions for RNA: ENST00000557519.1

RPS29-208, Transcript of ribosomal protein S29, human

TSL 3

Gene RPS29, Length 333 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS29-208	ENST00000557519	USP21	Q9UK80	565 aa		13.73	□□□□□ -0.21
RPS29-208	ENST00000557519	ABCA3	Q99758	1704 aa		13.73	□□□□□ -0.21
RPS29-208	ENST00000557519	TRPC5	Q9UL62	973 aa	Predicted RBP	13.72	□□□□□ -0.21
RPS29-208	ENST00000557519	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.71	□□□□□ -0.21
RPS29-208	ENST00000557519	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.71	□□□□□ -0.21
RPS29-208	ENST00000557519	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.71	□□□□□ -0.21
RPS29-208	ENST00000557519	RBM6	P78332	1123 aa	Known RBP	13.7	□□□□□ -0.22
RPS29-208	ENST00000557519	ZNF692	Q9BU19	519 aa	Predicted RBP	13.7	□□□□□ -0.22
RPS29-208	ENST00000557519	QTRT2	Q9H974	415 aa	Known RBP	13.7	□□□□□ -0.22
RPS29-208	ENST00000557519	NWD2	Q9ULI1	1742 aa		13.7	□□□□□ -0.22
RPS29-208	ENST00000557519	CABP1	Q9NZU7	370 aa		13.69	□□□□□ -0.22
RPS29-208	ENST00000557519	PLEKHG5	O94827	1062 aa		13.68	□□□□□ -0.22
RPS29-208	ENST00000557519	ABTB2	Q8N961	1025 aa		13.68	□□□□□ -0.22
RPS29-208	ENST00000557519	PUS7	Q96PZ0	661 aa	Known RBP	13.68	□□□□□ -0.22
RPS29-208	ENST00000557519	USP47	Q96K76	1375 aa		13.68	□□□□□ -0.22
RPS29-208	ENST00000557519	NINL	Q9Y2I6	1382 aa		13.68	□□□□□ -0.22
RPS29-208	ENST00000557519	USP6	P35125	1406 aa		13.67	□□□□□ -0.22
RPS29-208	ENST00000557519	PLCH1	Q4KWH8	1693 aa		13.67	□□□□□ -0.22
RPS29-208	ENST00000557519	CDCA8	Q53HL2	280 aa		13.67	□□□□□ -0.22
RPS29-208	ENST00000557519	NLRP13	Q86W25	1043 aa		13.67	□□□□□ -0.22
RPS29-208	ENST00000557519	COL14A1	Q05707	1796 aa	Known RBP	13.67	□□□□□ -0.22
RPS29-208	ENST00000557519	ATRN	O75882	1429 aa		13.66	□□□□□ -0.22
RPS29-208	ENST00000557519	AKAP12	Q02952	1782 aa		13.66	□□□□□ -0.22
RPS29-208	ENST00000557519	SLIT2	O94813	1529 aa		13.66	□□□□□ -0.22
RPS29-208	ENST00000557519	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.66	□□□□□ -0.22
RPS29-208	ENST00000557519	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.66	□□□□□ -0.22
RPS29-208	ENST00000557519	UNC5CL	Q8IV45	518 aa		13.66	□□□□□ -0.22
RPS29-208	ENST00000557519	CABLES1	Q8TDN4	633 aa		13.66	□□□□□ -0.22
RPS29-208	ENST00000557519	CRYBG1	Q9Y4K1	1723 aa		13.65	□□□□□ -0.22
RPS29-208	ENST00000557519	ST20-MTHFS	A0A0A6YYL1	179 aa		13.65	□□□□□ -0.22
RPS29-208	ENST00000557519	TMF1	P82094	1093 aa		13.65	□□□□□ -0.22
RPS29-208	ENST00000557519	TTC21A	Q8NDW8	1320 aa		13.64	□□□□□ -0.23
RPS29-208	ENST00000557519	KTN1	Q86UP2	1357 aa	Known RBP	13.64	□□□□□ -0.23
RPS29-208	ENST00000557519	TMC1	Q8TDI8	760 aa		13.64	□□□□□ -0.23
RPS29-208	ENST00000557519	PRDM11	Q9NQV5	511 aa		13.64	□□□□□ -0.23
RPS29-208	ENST00000557519	TERF2IP	Q9NYB0	399 aa		13.64	□□□□□ -0.23
RPS29-208	ENST00000557519	BCL9L	Q86UU0	1499 aa		13.63	□□□□□ -0.23
RPS29-208	ENST00000557519	MON2	Q7Z3U7	1717 aa		13.63	□□□□□ -0.23
RPS29-208	ENST00000557519	CCDC9	Q9Y3X0	531 aa	Known RBP	13.62	□□□□□ -0.23
RPS29-208	ENST00000557519	USP19	O94966	1318 aa		13.62	□□□□□ -0.23
RPS29-208	ENST00000557519	NLRP6	P59044	892 aa		13.61	□□□□□ -0.23
RPS29-208	ENST00000557519	NUTM2G	Q5VZR2	741 aa		13.61	□□□□□ -0.23
RPS29-208	ENST00000557519	GJD4	Q96KN9	370 aa	Predicted RBP	13.61	□□□□□ -0.23
RPS29-208	ENST00000557519	CPSF1	Q10570	1443 aa	Known RBP	13.61	□□□□□ -0.23
RPS29-208	ENST00000557519	NRK	Q7Z2Y5	1582 aa		13.61	□□□□□ -0.23
RPS29-208	ENST00000557519	RGS12	O14924	1447 aa		13.6	□□□□□ -0.23
RPS29-208	ENST00000557519	VPS72	Q15906	364 aa		13.6	□□□□□ -0.23
RPS29-208	ENST00000557519	KCNH5	Q8NCM2	988 aa		13.6	□□□□□ -0.23
RPS29-208	ENST00000557519	TESK2	Q96S53	571 aa		13.6	□□□□□ -0.23
RPS29-208	ENST00000557519	BTG4	Q9NY30	223 aa		13.6	□□□□□ -0.23
RPS29-208	ENST00000557519	TTC21B	Q7Z4L5	1316 aa		13.6	□□□□□ -0.23
RPS29-208	ENST00000557519	PIK3C2A	O00443	1686 aa		13.59	□□□□□ -0.23
RPS29-208	ENST00000557519	CPD	O75976	1380 aa		13.59	□□□□□ -0.23
RPS29-208	ENST00000557519	KIAA0232	Q92628	1395 aa		13.59	□□□□□ -0.23
RPS29-208	ENST00000557519	NRAP	Q86VF7	1730 aa		13.59	□□□□□ -0.23
RPS29-208	ENST00000557519	EDC4	Q6P2E9	1401 aa	Known RBP	13.59	□□□□□ -0.23
RPS29-208	ENST00000557519	FAM83G	A6ND36	823 aa		13.59	□□□□□ -0.23
RPS29-208	ENST00000557519	SSH2	Q76I76	1423 aa		13.58	□□□□□ -0.24
RPS29-208	ENST00000557519	GC	P02774	474 aa		13.58	□□□□□ -0.24
RPS29-208	ENST00000557519	ZC3H6	P61129	1189 aa	Known RBP	13.58	□□□□□ -0.24
RPS29-208	ENST00000557519	SLIT3	O75094	1523 aa		13.58	□□□□□ -0.24
RPS29-208	ENST00000557519	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
RPS29-208	ENST00000557519	EVA1C	P58658	441 aa		13.56	□□□□□ -0.24
RPS29-208	ENST00000557519	GLI3	P10071	1580 aa		13.55	□□□□□ -0.24
RPS29-208	ENST00000557519		A0A0G2JS52	829 aa		13.55	□□□□□ -0.24
RPS29-208	ENST00000557519	MYT1	Q01538	1121 aa		13.55	□□□□□ -0.24
RPS29-208	ENST00000557519	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
RPS29-208	ENST00000557519	SLC12A5	Q9H2X9	1139 aa		13.55	□□□□□ -0.24
RPS29-208	ENST00000557519	USP54	Q70EL1	1684 aa		13.55	□□□□□ -0.24
RPS29-208	ENST00000557519		A0A1W2PP64	1363 aa		13.55	□□□□□ -0.24
RPS29-208	ENST00000557519	ANKRD36B	Q8N2N9	1353 aa		13.55	□□□□□ -0.24
RPS29-208	ENST00000557519	ZBTB7C	A1YPR0	619 aa		13.54	□□□□□ -0.24
RPS29-208	ENST00000557519	CD163L1	Q9NR16	1453 aa		13.54	□□□□□ -0.24
RPS29-208	ENST00000557519	ABCC6	O95255	1503 aa		13.54	□□□□□ -0.24
RPS29-208	ENST00000557519	CHRNA2	Q15822	529 aa		13.53	□□□□□ -0.24
RPS29-208	ENST00000557519	STRN4	Q9NRL3	753 aa		13.53	□□□□□ -0.24
RPS29-208	ENST00000557519	USP31	Q70CQ4	1352 aa		13.53	□□□□□ -0.24
RPS29-208	ENST00000557519	SPATA31A5	Q5VU36	1347 aa		13.52	□□□□□ -0.25
RPS29-208	ENST00000557519	SPATA31A7	Q8IWB4	1347 aa		13.52	□□□□□ -0.25
RPS29-208	ENST00000557519	AATK	Q6ZMQ8	1374 aa		13.52	□□□□□ -0.25
RPS29-208	ENST00000557519	LMO7	Q8WWI1	1683 aa		13.52	□□□□□ -0.25
RPS29-208	ENST00000557519	SEPT12	Q8IYM1	358 aa		13.51	□□□□□ -0.25
RPS29-208	ENST00000557519	COG3	Q96JB2	828 aa		13.5	□□□□□ -0.25
RPS29-208	ENST00000557519	COL5A2	P05997	1499 aa	Predicted RBP	13.49	□□□□□ -0.25
RPS29-208	ENST00000557519	SPATA31A1	Q5TZJ5	1347 aa		13.49	□□□□□ -0.25
RPS29-208	ENST00000557519	SOX12	O15370	315 aa		13.49	□□□□□ -0.25
RPS29-208	ENST00000557519	ONECUT3	O60422	494 aa	Predicted RBP	13.49	□□□□□ -0.25
RPS29-208	ENST00000557519	FAM98C	Q17RN3	349 aa	Known RBP	13.49	□□□□□ -0.25
RPS29-208	ENST00000557519	NME9	Q86XW9	330 aa		13.49	□□□□□ -0.25
RPS29-208	ENST00000557519	CCDC125	Q86Z20	511 aa		13.49	□□□□□ -0.25
RPS29-208	ENST00000557519	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
RPS29-208	ENST00000557519	THRAP3	Q9Y2W1	955 aa	Known RBP	13.49	□□□□□ -0.25
RPS29-208	ENST00000557519	CAMTA1	Q9Y6Y1	1673 aa		13.49	□□□□□ -0.25
RPS29-208	ENST00000557519	NFAT5	O94916	1531 aa		13.49	□□□□□ -0.25
RPS29-208	ENST00000557519	CRB1	P82279	1406 aa		13.48	□□□□□ -0.25
RPS29-208	ENST00000557519	HSPA5	P11021	654 aa	Known RBP	13.48	□□□□□ -0.25
RPS29-208	ENST00000557519	KRT27	Q7Z3Y8	459 aa		13.48	□□□□□ -0.25
RPS29-208	ENST00000557519	ARHGEF25	Q86VW2	580 aa		13.48	□□□□□ -0.25
RPS29-208	ENST00000557519	POLR3GL	Q9BT43	218 aa		13.48	□□□□□ -0.25
RPS29-208	ENST00000557519	BRWD3	Q6RI45	1802 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms