RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 PRR36Q9H6K5 1346 aa15.34■□□□□ 0.05
PSMC6-215ENST00000557517 L3MBTL2Q969R5 705 aa15.32■□□□□ 0.04
PSMC6-215ENST00000557517 EIF3AQ14152 1382 aaKnown RBP15.32■□□□□ 0.04
PSMC6-215ENST00000557517 LRP5O75197 1615 aa15.32■□□□□ 0.04
PSMC6-215ENST00000557517 FMN2Q9NZ56 1722 aa15.31■□□□□ 0.04
PSMC6-215ENST00000557517 GLI3P10071 1580 aa15.3■□□□□ 0.04
PSMC6-215ENST00000557517 BLMP54132 1417 aaPredicted RBP15.3■□□□□ 0.04
PSMC6-215ENST00000557517 CABLES1Q8TDN4 633 aa15.3■□□□□ 0.04
PSMC6-215ENST00000557517 NUDT16Q96DE0 195 aaKnown RBP15.3■□□□□ 0.04
PSMC6-215ENST00000557517 CDK19Q9BWU1 502 aa15.3■□□□□ 0.04
PSMC6-215ENST00000557517 UNC5CLQ8IV45 518 aa15.29■□□□□ 0.04
PSMC6-215ENST00000557517 GJD4Q96KN9 370 aaPredicted RBP15.29■□□□□ 0.04
PSMC6-215ENST00000557517 SIN3AQ96ST3 1273 aa15.29■□□□□ 0.04
PSMC6-215ENST00000557517 ADGRB2O60241 1585 aa15.28■□□□□ 0.04
PSMC6-215ENST00000557517 TNS3Q68CZ2 1445 aa15.28■□□□□ 0.04
PSMC6-215ENST00000557517 ARHGEF10O15013 1369 aa15.28■□□□□ 0.04
PSMC6-215ENST00000557517 CCDC61Q9Y6R9 512 aa15.28■□□□□ 0.04
PSMC6-215ENST00000557517 BRWD3Q6RI45 1802 aa15.28■□□□□ 0.04
PSMC6-215ENST00000557517 SLIT2O94813 1529 aa15.27■□□□□ 0.04
PSMC6-215ENST00000557517 GPRASP1Q5JY77 1395 aa15.27■□□□□ 0.04
PSMC6-215ENST00000557517 LMOD2Q6P5Q4 547 aa15.27■□□□□ 0.04
PSMC6-215ENST00000557517 NGDNQ8NEJ9 315 aaKnown RBP15.27■□□□□ 0.04
PSMC6-215ENST00000557517 KIF1AQ12756 1690 aa15.27■□□□□ 0.03
PSMC6-215ENST00000557517 RALGAPBQ86X10 1494 aa15.27■□□□□ 0.03
PSMC6-215ENST00000557517 PLEKHG3A1L390 1219 aa15.26■□□□□ 0.03
PSMC6-215ENST00000557517 FAM83GA6ND36 823 aa15.26■□□□□ 0.03
PSMC6-215ENST00000557517 ONECUT3O60422 494 aaPredicted RBP15.25■□□□□ 0.03
PSMC6-215ENST00000557517 HAP1P54257 671 aaPredicted RBP15.25■□□□□ 0.03
PSMC6-215ENST00000557517 TULP4Q9NRJ4 1543 aa15.25■□□□□ 0.03
PSMC6-215ENST00000557517 NBPF8Q3BBV2 869 aa15.24■□□□□ 0.03
PSMC6-215ENST00000557517 USP32Q8NFA0 1604 aa15.24■□□□□ 0.03
PSMC6-215ENST00000557517 NEUROD1Q13562 356 aa15.23■□□□□ 0.03
PSMC6-215ENST00000557517 VPS72Q15906 364 aa15.23■□□□□ 0.03
PSMC6-215ENST00000557517 CENPJQ9HC77 1338 aaPredicted RBP15.22■□□□□ 0.03
PSMC6-215ENST00000557517 POLR3AO14802 1390 aaPredicted RBP15.22■□□□□ 0.03
PSMC6-215ENST00000557517 DEFB132Q7Z7B7 95 aa15.21■□□□□ 0.03
PSMC6-215ENST00000557517 ATP7BP35670 1465 aa15.2■□□□□ 0.02
PSMC6-215ENST00000557517 ACEP12821 1306 aa15.2■□□□□ 0.02
PSMC6-215ENST00000557517 PAK3O75914 559 aaPredicted RBP15.2■□□□□ 0.02
PSMC6-215ENST00000557517 PLEKHG5O94827 1062 aa15.19■□□□□ 0.02
PSMC6-215ENST00000557517 NWD2Q9ULI1 1742 aa15.18■□□□□ 0.02
PSMC6-215ENST00000557517 KIAA1210Q9ULL0 1709 aa15.18■□□□□ 0.02
PSMC6-215ENST00000557517 SRPK2P78362 688 aaKnown RBP15.18■□□□□ 0.02
PSMC6-215ENST00000557517 PIP4P2Q8N4L2 257 aa15.18■□□□□ 0.02
PSMC6-215ENST00000557517 CABP2Q9NPB3 220 aa15.18■□□□□ 0.02
PSMC6-215ENST00000557517 TRIM26Q12899 539 aaPredicted RBP15.17■□□□□ 0.02
PSMC6-215ENST00000557517 BTG4Q9NY30 223 aa15.17■□□□□ 0.02
PSMC6-215ENST00000557517 RGPD8O14715 1765 aaPredicted RBP15.16■□□□□ 0.02
PSMC6-215ENST00000557517 PLCH1Q4KWH8 1693 aa15.16■□□□□ 0.02
PSMC6-215ENST00000557517 PITPNM1O00562 1244 aa15.16■□□□□ 0.02
PSMC6-215ENST00000557517 SF3B2Q13435 895 aaKnown RBP15.16■□□□□ 0.02
PSMC6-215ENST00000557517 SEPT12Q8IYM1 358 aa15.16■□□□□ 0.02
PSMC6-215ENST00000557517 CABP1Q9NZU7 370 aa15.16■□□□□ 0.02
PSMC6-215ENST00000557517 ABCA3Q99758 1704 aa15.15■□□□□ 0.02
PSMC6-215ENST00000557517 ARHGEF28Q8N1W1 1705 aaKnown RBP15.14■□□□□ 0.01
PSMC6-215ENST00000557517 ABTB2Q8N961 1025 aa15.14■□□□□ 0.01
PSMC6-215ENST00000557517 BRD4O60885 1362 aaPredicted RBP15.13■□□□□ 0.01
PSMC6-215ENST00000557517 TRPM3Q9HCF6 1732 aaPredicted RBP15.13■□□□□ 0.01
PSMC6-215ENST00000557517 PRDM11Q9NQV5 511 aa15.13■□□□□ 0.01
PSMC6-215ENST00000557517 CCDC9Q9Y3X0 531 aaKnown RBP15.13■□□□□ 0.01
PSMC6-215ENST00000557517 EVC2Q86UK5 1308 aa15.13■□□□□ 0.01
PSMC6-215ENST00000557517 ROCK2O75116 1388 aaKnown RBP15.12■□□□□ 0.01
PSMC6-215ENST00000557517 NUTM2GQ5VZR2 741 aa15.12■□□□□ 0.01
PSMC6-215ENST00000557517 KRT27Q7Z3Y8 459 aa15.12■□□□□ 0.01
PSMC6-215ENST00000557517 NLRP13Q86W25 1043 aa15.12■□□□□ 0.01
PSMC6-215ENST00000557517 PPIP5K1Q6PFW1 1433 aa15.11■□□□□ 0.01
PSMC6-215ENST00000557517 SPDYE2BA6NHP3 402 aa15.11■□□□□ 0.01
PSMC6-215ENST00000557517 SPDYE6P0CI01 402 aa15.11■□□□□ 0.01
PSMC6-215ENST00000557517 SPDYE2Q495Y8 402 aa15.11■□□□□ 0.01
PSMC6-215ENST00000557517 SPATA31A5Q5VU36 1347 aa15.11■□□□□ 0.01
PSMC6-215ENST00000557517 SPATA31A7Q8IWB4 1347 aa15.11■□□□□ 0.01
PSMC6-215ENST00000557517 ALS2Q96Q42 1657 aa15.1■□□□□ 0.01
PSMC6-215ENST00000557517 NRAPQ86VF7 1730 aa15.1■□□□□ 0.01
PSMC6-215ENST00000557517 GCP02774 474 aa15.1■□□□□ 0.01
PSMC6-215ENST00000557517 ZC3H6P61129 1189 aaKnown RBP15.1■□□□□ 0.01
PSMC6-215ENST00000557517 ZNF692Q9BU19 519 aaPredicted RBP15.1■□□□□ 0.01
PSMC6-215ENST00000557517 KIAA0232Q92628 1395 aa15.1■□□□□ 0.01
PSMC6-215ENST00000557517 RGPD1P0DJD0 1748 aa15.09■□□□□ 0.01
PSMC6-215ENST00000557517 PSDA5PKW4 1024 aaPredicted RBP15.09■□□□□ 0.01
PSMC6-215ENST00000557517 BAG6P46379 1132 aa15.09■□□□□ 0.01
PSMC6-215ENST00000557517 SP7Q8TDD2 431 aaPredicted RBP15.09■□□□□ 0.01
PSMC6-215ENST00000557517 USP19O94966 1318 aa15.09■□□□□ 0.01
PSMC6-215ENST00000557517 A0A0G2JS52 829 aa15.08■□□□□ 0
PSMC6-215ENST00000557517 MYT1Q01538 1121 aa15.08■□□□□ 0
PSMC6-215ENST00000557517 CHRNA2Q15822 529 aa15.08■□□□□ 0
PSMC6-215ENST00000557517 FAM98CQ17RN3 349 aaKnown RBP15.08■□□□□ 0
PSMC6-215ENST00000557517 CARD11Q9BXL7 1154 aa15.08■□□□□ 0
PSMC6-215ENST00000557517 CPDO75976 1380 aa15.08■□□□□ 0
PSMC6-215ENST00000557517 DISP2A7MBM2 1401 aa15.08■□□□□ 0
PSMC6-215ENST00000557517 SSH2Q76I76 1423 aa15.08■□□□□ 0
PSMC6-215ENST00000557517 FXR2P51116 673 aaKnown RBP eCLIP15.06■□□□□ 0
PSMC6-215ENST00000557517 SPATA31A1Q5TZJ5 1347 aa15.06■□□□□ 0
PSMC6-215ENST00000557517 SBNO2Q9Y2G9 1366 aa15.06■□□□□ 0
PSMC6-215ENST00000557517 USP6P35125 1406 aa15.06■□□□□ 0
PSMC6-215ENST00000557517 TNS1Q9HBL0 1735 aaKnown RBP15.06■□□□□ 0
PSMC6-215ENST00000557517 NLRP6P59044 892 aa15.05■□□□□ -0
PSMC6-215ENST00000557517 TONSLQ96HA7 1378 aa15.05■□□□□ -0
PSMC6-215ENST00000557517 TRPM1Q7Z4N2 1603 aa15.04■□□□□ -0
PSMC6-215ENST00000557517 EVA1CP58658 441 aa15.04■□□□□ -0
PSMC6-215ENST00000557517 PUS7Q96PZ0 661 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms