RNA–Protein interactions for RNA: ENST00000557510.5

NPC2-209, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 1 (best) BASIC

Gene NPC2, Length 1,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-209ENST00000557510 PMFBP1Q8TBY8 1022 aa13.31□□□□□ -0.28
NPC2-209ENST00000557510 GJD4Q96KN9 370 aaPredicted RBP13.31□□□□□ -0.28
NPC2-209ENST00000557510 POGKQ9P215 609 aa13.31□□□□□ -0.28
NPC2-209ENST00000557510 TRAK1Q9UPV9 953 aa13.31□□□□□ -0.28
NPC2-209ENST00000557510 PRR36Q9H6K5 1346 aa13.31□□□□□ -0.28
NPC2-209ENST00000557510 ARHGEF28Q8N1W1 1705 aaKnown RBP13.3□□□□□ -0.28
NPC2-209ENST00000557510 RALGAPBQ86X10 1494 aa13.3□□□□□ -0.28
NPC2-209ENST00000557510 DCAF11Q8TEB1 546 aa13.3□□□□□ -0.28
NPC2-209ENST00000557510 MINK1Q8N4C8 1332 aaPredicted RBP13.3□□□□□ -0.28
NPC2-209ENST00000557510 SBNO1A3KN83 1393 aa13.3□□□□□ -0.28
NPC2-209ENST00000557510 ANKARQ7Z5J8 1434 aa13.3□□□□□ -0.28
NPC2-209ENST00000557510 ALS2Q96Q42 1657 aa13.29□□□□□ -0.28
NPC2-209ENST00000557510 UNC5CLQ8IV45 518 aa13.29□□□□□ -0.28
NPC2-209ENST00000557510 NWD2Q9ULI1 1742 aa13.28□□□□□ -0.28
NPC2-209ENST00000557510 CACNB1Q02641 598 aaPredicted RBP13.28□□□□□ -0.28
NPC2-209ENST00000557510 LMOD2Q6P5Q4 547 aa13.28□□□□□ -0.28
NPC2-209ENST00000557510 TULP4Q9NRJ4 1543 aa13.28□□□□□ -0.28
NPC2-209ENST00000557510 CRYBG1Q9Y4K1 1723 aa13.27□□□□□ -0.28
NPC2-209ENST00000557510 PSME1Q06323 249 aa13.27□□□□□ -0.29
NPC2-209ENST00000557510 NRAPQ86VF7 1730 aa13.27□□□□□ -0.29
NPC2-209ENST00000557510 ARHGEF10O15013 1369 aa13.25□□□□□ -0.29
NPC2-209ENST00000557510 HAP1P54257 671 aaPredicted RBP13.25□□□□□ -0.29
NPC2-209ENST00000557510 FAM83GA6ND36 823 aa13.24□□□□□ -0.29
NPC2-209ENST00000557510 WASLO00401 505 aaPredicted RBP13.24□□□□□ -0.29
NPC2-209ENST00000557510 FBXO3Q9UK99 471 aa13.24□□□□□ -0.29
NPC2-209ENST00000557510 ATP7BP35670 1465 aa13.23□□□□□ -0.29
NPC2-209ENST00000557510 ITSN1Q15811 1721 aa13.23□□□□□ -0.29
NPC2-209ENST00000557510 VPS72Q15906 364 aa13.23□□□□□ -0.29
NPC2-209ENST00000557510 SEPT12Q8IYM1 358 aa13.22□□□□□ -0.29
NPC2-209ENST00000557510 TOPAZ1Q8N9V7 1692 aa13.21□□□□□ -0.29
NPC2-209ENST00000557510 GPRASP1Q5JY77 1395 aa13.21□□□□□ -0.29
NPC2-209ENST00000557510 COL14A1Q05707 1796 aaKnown RBP13.21□□□□□ -0.29
NPC2-209ENST00000557510 SRCAPQ6ZRS2 3230 aa13.21□□□□□ -0.29
NPC2-209ENST00000557510 KIAA1210Q9ULL0 1709 aa13.21□□□□□ -0.3
NPC2-209ENST00000557510 EIF3AQ14152 1382 aaKnown RBP13.2□□□□□ -0.3
NPC2-209ENST00000557510 CCDC9Q9Y3X0 531 aaKnown RBP13.2□□□□□ -0.3
NPC2-209ENST00000557510 ONECUT3O60422 494 aaPredicted RBP13.19□□□□□ -0.3
NPC2-209ENST00000557510 NBPF1Q3BBV0 1214 aa13.19□□□□□ -0.3
NPC2-209ENST00000557510 NGDNQ8NEJ9 315 aaKnown RBP13.19□□□□□ -0.3
NPC2-209ENST00000557510 NUDT16Q96DE0 195 aaKnown RBP13.19□□□□□ -0.3
NPC2-209ENST00000557510 STAC3Q96MF2 364 aa13.19□□□□□ -0.3
NPC2-209ENST00000557510 BTG4Q9NY30 223 aa13.19□□□□□ -0.3
NPC2-209ENST00000557510 PHRF1Q9P1Y6 1649 aaKnown RBP13.19□□□□□ -0.3
NPC2-209ENST00000557510 BLMP54132 1417 aaPredicted RBP13.19□□□□□ -0.3
NPC2-209ENST00000557510 DEFB132Q7Z7B7 95 aa13.18□□□□□ -0.3
NPC2-209ENST00000557510 PAK3O75914 559 aaPredicted RBP13.17□□□□□ -0.3
NPC2-209ENST00000557510 CCDC125Q86Z20 511 aa13.17□□□□□ -0.3
NPC2-209ENST00000557510 CDK19Q9BWU1 502 aa13.17□□□□□ -0.3
NPC2-209ENST00000557510 FAM98CQ17RN3 349 aaKnown RBP13.16□□□□□ -0.3
NPC2-209ENST00000557510 KRT27Q7Z3Y8 459 aa13.16□□□□□ -0.3
NPC2-209ENST00000557510 ZRANB1Q9UGI0 708 aa13.16□□□□□ -0.3
NPC2-209ENST00000557510 THSD7AQ9UPZ6 1657 aa13.15□□□□□ -0.3
NPC2-209ENST00000557510 NUTM2GQ5VZR2 741 aa13.15□□□□□ -0.3
NPC2-209ENST00000557510 A0A0G2JS52 829 aa13.14□□□□□ -0.31
NPC2-209ENST00000557510 MYT1Q01538 1121 aa13.14□□□□□ -0.31
NPC2-209ENST00000557510 CHRNA2Q15822 529 aa13.14□□□□□ -0.31
NPC2-209ENST00000557510 FAM182BQ5T319 152 aa13.14□□□□□ -0.31
NPC2-209ENST00000557510 POLR3AO14802 1390 aaPredicted RBP13.14□□□□□ -0.31
NPC2-209ENST00000557510 KIAA0232Q92628 1395 aa13.14□□□□□ -0.31
NPC2-209ENST00000557510 QRICH2Q9H0J4 1663 aa13.14□□□□□ -0.31
NPC2-209ENST00000557510 ACEP12821 1306 aa13.13□□□□□ -0.31
NPC2-209ENST00000557510 SPATA31A5Q5VU36 1347 aa13.13□□□□□ -0.31
NPC2-209ENST00000557510 SPATA31A7Q8IWB4 1347 aa13.13□□□□□ -0.31
NPC2-209ENST00000557510 NRKQ7Z2Y5 1582 aa13.13□□□□□ -0.31
NPC2-209ENST00000557510 VASPP50552 380 aaPredicted RBP13.13□□□□□ -0.31
NPC2-209ENST00000557510 ZNF692Q9BU19 519 aaPredicted RBP13.13□□□□□ -0.31
NPC2-209ENST00000557510 PRDM11Q9NQV5 511 aa13.13□□□□□ -0.31
NPC2-209ENST00000557510 SPDYE2BA6NHP3 402 aa13.12□□□□□ -0.31
NPC2-209ENST00000557510 SPDYE6P0CI01 402 aa13.12□□□□□ -0.31
NPC2-209ENST00000557510 NBPF8Q3BBV2 869 aa13.12□□□□□ -0.31
NPC2-209ENST00000557510 SPDYE2Q495Y8 402 aa13.12□□□□□ -0.31
NPC2-209ENST00000557510 SSUH2Q9Y2M2 353 aa13.12□□□□□ -0.31
NPC2-209ENST00000557510 ZC3H6P61129 1189 aaKnown RBP13.11□□□□□ -0.31
NPC2-209ENST00000557510 PCGF6Q9BYE7 350 aa13.11□□□□□ -0.31
NPC2-209ENST00000557510 CCDC61Q9Y6R9 512 aa13.11□□□□□ -0.31
NPC2-209ENST00000557510 RGPD1P0DJD0 1748 aa13.1□□□□□ -0.31
NPC2-209ENST00000557510 TNS1Q9HBL0 1735 aaKnown RBP13.1□□□□□ -0.31
NPC2-209ENST00000557510 PLEKHG3A1L390 1219 aa13.1□□□□□ -0.31
NPC2-209ENST00000557510 CABP2Q9NPB3 220 aa13.1□□□□□ -0.31
NPC2-209ENST00000557510 LMO7Q8WWI1 1683 aa13.09□□□□□ -0.31
NPC2-209ENST00000557510 CAMTA1Q9Y6Y1 1673 aa13.09□□□□□ -0.31
NPC2-209ENST00000557510 PPIP5K1Q6PFW1 1433 aa13.09□□□□□ -0.31
NPC2-209ENST00000557510 L3MBTL2Q969R5 705 aa13.09□□□□□ -0.31
NPC2-209ENST00000557510 SIN3AQ96ST3 1273 aa13.09□□□□□ -0.31
NPC2-209ENST00000557510 STRN4Q9NRL3 753 aa13.09□□□□□ -0.31
NPC2-209ENST00000557510 TRPM1Q7Z4N2 1603 aa13.09□□□□□ -0.31
NPC2-209ENST00000557510 SPATA31A1Q5TZJ5 1347 aa13.09□□□□□ -0.31
NPC2-209ENST00000557510 CENPJQ9HC77 1338 aaPredicted RBP13.09□□□□□ -0.31
NPC2-209ENST00000557510 SF3B2Q13435 895 aaKnown RBP13.08□□□□□ -0.32
NPC2-209ENST00000557510 SSH2Q76I76 1423 aa13.07□□□□□ -0.32
NPC2-209ENST00000557510 SRPK2P78362 688 aaKnown RBP13.07□□□□□ -0.32
NPC2-209ENST00000557510 ABTB2Q8N961 1025 aa13.07□□□□□ -0.32
NPC2-209ENST00000557510 USP19O94966 1318 aa13.07□□□□□ -0.32
NPC2-209ENST00000557510 ZEB1P37275 1124 aaPredicted RBP13.06□□□□□ -0.32
NPC2-209ENST00000557510 TRIM26Q12899 539 aaPredicted RBP13.06□□□□□ -0.32
NPC2-209ENST00000557510 USP35Q9P2H5 1018 aa13.06□□□□□ -0.32
NPC2-209ENST00000557510 PSDA5PKW4 1024 aaPredicted RBP13.05□□□□□ -0.32
NPC2-209ENST00000557510 EN1Q05925 392 aaPredicted RBP13.05□□□□□ -0.32
NPC2-209ENST00000557510 LARP1Q6PKG0 1096 aaKnown RBP13.05□□□□□ -0.32
NPC2-209ENST00000557510 PIK3C2AO00443 1686 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms