RNA–Protein interactions for RNA: ENST00000557410.5

SV2B-206, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 1 (best)

Gene SV2B, Length 4,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-206ENST00000557410 NEXMIFQ5QGS0 1516 aa9.92□□□□□ -0.82
SV2B-206ENST00000557410 TULP4Q9NRJ4 1543 aa9.92□□□□□ -0.82
SV2B-206ENST00000557410 GGNBP2Q9H3C7 697 aa9.92□□□□□ -0.82
SV2B-206ENST00000557410 HDGFL2Q7Z4V5 671 aaPredicted RBP9.92□□□□□ -0.82
SV2B-206ENST00000557410 PMFBP1Q8TBY8 1022 aa9.92□□□□□ -0.82
SV2B-206ENST00000557410 ARHGEF28Q8N1W1 1705 aaKnown RBP9.92□□□□□ -0.82
SV2B-206ENST00000557410 USP32Q8NFA0 1604 aa9.92□□□□□ -0.82
SV2B-206ENST00000557410 SMC4Q9NTJ3 1288 aa9.92□□□□□ -0.82
SV2B-206ENST00000557410 DIP2CQ9Y2E4 1556 aa9.91□□□□□ -0.82
SV2B-206ENST00000557410 IQSEC2Q5JU85 1478 aa9.91□□□□□ -0.82
SV2B-206ENST00000557410 GOLGA6L3A6NEY3 463 aa9.91□□□□□ -0.82
SV2B-206ENST00000557410 CCDC27Q2M243 656 aa9.91□□□□□ -0.82
SV2B-206ENST00000557410 TERF2IPQ9NYB0 399 aa9.91□□□□□ -0.82
SV2B-206ENST00000557410 PRAM1Q96QH2 718 aa9.91□□□□□ -0.82
SV2B-206ENST00000557410 PHF23Q9BUL5 403 aaPredicted RBP9.91□□□□□ -0.82
SV2B-206ENST00000557410 CHMP4BQ9H444 224 aaKnown RBP9.91□□□□□ -0.82
SV2B-206ENST00000557410 TNNQ9UQP3 1299 aa9.91□□□□□ -0.82
SV2B-206ENST00000557410 PIK3C2BO00750 1634 aa9.91□□□□□ -0.82
SV2B-206ENST00000557410 FOXD4L1Q9NU39 408 aa9.9□□□□□ -0.82
SV2B-206ENST00000557410 A0A1W2PP64 1363 aa9.9□□□□□ -0.82
SV2B-206ENST00000557410 IPO8O15397 1037 aaKnown RBP9.9□□□□□ -0.82
SV2B-206ENST00000557410 NFKBIBQ15653 356 aa9.9□□□□□ -0.82
SV2B-206ENST00000557410 RLBP1P12271 317 aa9.9□□□□□ -0.83
SV2B-206ENST00000557410 YEATS2Q9ULM3 1422 aa9.9□□□□□ -0.83
SV2B-206ENST00000557410 ARHGAP31Q2M1Z3 1444 aa9.89□□□□□ -0.83
SV2B-206ENST00000557410 IL27Q8NEV9 243 aa9.89□□□□□ -0.83
SV2B-206ENST00000557410 SOX12O15370 315 aa9.89□□□□□ -0.83
SV2B-206ENST00000557410 AAMPQ13685 434 aa9.89□□□□□ -0.83
SV2B-206ENST00000557410 TSR2Q969E8 191 aaKnown RBP9.89□□□□□ -0.83
SV2B-206ENST00000557410 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.89□□□□□ -0.83
SV2B-206ENST00000557410 ATAD2Q6PL18 1390 aa9.88□□□□□ -0.83
SV2B-206ENST00000557410 MSNP26038 577 aaKnown RBP9.88□□□□□ -0.83
SV2B-206ENST00000557410 GBP4Q96PP9 640 aa9.88□□□□□ -0.83
SV2B-206ENST00000557410 ABCC11Q96J66 1382 aa9.88□□□□□ -0.83
SV2B-206ENST00000557410 FBXO31Q5XUX0 539 aaPredicted RBP9.88□□□□□ -0.83
SV2B-206ENST00000557410 ZKSCAN2Q63HK3 967 aa9.88□□□□□ -0.83
SV2B-206ENST00000557410 PCDHB15Q9Y5E8 787 aa9.88□□□□□ -0.83
SV2B-206ENST00000557410 AEBP2Q6ZN18 517 aaPredicted RBP9.87□□□□□ -0.83
SV2B-206ENST00000557410 ZFYVE9O95405 1425 aa9.87□□□□□ -0.83
SV2B-206ENST00000557410 MYO5BQ9ULV0 1848 aa9.87□□□□□ -0.83
SV2B-206ENST00000557410 TMPOP42166 694 aaKnown RBP9.87□□□□□ -0.83
SV2B-206ENST00000557410 FYB1O15117 783 aa9.87□□□□□ -0.83
SV2B-206ENST00000557410 EXOSC9Q06265 439 aaKnown RBP9.87□□□□□ -0.83
SV2B-206ENST00000557410 THEMISQ8N1K5 641 aaPredicted RBP9.87□□□□□ -0.83
SV2B-206ENST00000557410 DZIP1LQ8IYY4 767 aaKnown RBP9.87□□□□□ -0.83
SV2B-206ENST00000557410 CDK19Q9BWU1 502 aa9.87□□□□□ -0.83
SV2B-206ENST00000557410 RICTORQ6R327 1708 aa9.86□□□□□ -0.83
SV2B-206ENST00000557410 YTHDC2Q9H6S0 1430 aaKnown RBP9.86□□□□□ -0.83
SV2B-206ENST00000557410 NUTM2FA1L443 756 aa9.86□□□□□ -0.83
SV2B-206ENST00000557410 NCBP3Q53F19 620 aaKnown RBP9.86□□□□□ -0.83
SV2B-206ENST00000557410 DIAPH1O60610 1272 aaKnown RBP9.86□□□□□ -0.83
SV2B-206ENST00000557410 MVPQ14764 893 aaKnown RBP9.86□□□□□ -0.83
SV2B-206ENST00000557410 TXNDC2Q86VQ3 553 aa9.86□□□□□ -0.83
SV2B-206ENST00000557410 PDZRN3Q9UPQ7 1066 aa9.86□□□□□ -0.83
SV2B-206ENST00000557410 RIPK4P57078 832 aa9.86□□□□□ -0.83
SV2B-206ENST00000557410 BRPF3Q9ULD4 1205 aa9.86□□□□□ -0.83
SV2B-206ENST00000557410 A0A0G2JS52 829 aa9.85□□□□□ -0.83
SV2B-206ENST00000557410 NGDNQ8NEJ9 315 aaKnown RBP9.85□□□□□ -0.83
SV2B-206ENST00000557410 CABP1Q9NZU7 370 aa9.85□□□□□ -0.83
SV2B-206ENST00000557410 PREX1Q8TCU6 1659 aa9.85□□□□□ -0.83
SV2B-206ENST00000557410 CT47B1P0C2W7 299 aaPredicted RBP9.85□□□□□ -0.83
SV2B-206ENST00000557410 ARID3AQ99856 593 aa9.85□□□□□ -0.83
SV2B-206ENST00000557410 SEC24BO95487 1268 aa9.85□□□□□ -0.83
SV2B-206ENST00000557410 PLEKHF1Q96S99 279 aa9.85□□□□□ -0.83
SV2B-206ENST00000557410 ANO8Q9HCE9 1232 aaPredicted RBP9.85□□□□□ -0.83
SV2B-206ENST00000557410 PTPRMP28827 1452 aa9.84□□□□□ -0.83
SV2B-206ENST00000557410 TMEM131LA2VDJ0 1609 aa9.84□□□□□ -0.83
SV2B-206ENST00000557410 ELL2O00472 640 aaPredicted RBP9.84□□□□□ -0.83
SV2B-206ENST00000557410 TRIM35Q9UPQ4 493 aa9.84□□□□□ -0.83
SV2B-206ENST00000557410 PPP6R1Q9UPN7 881 aa9.84□□□□□ -0.83
SV2B-206ENST00000557410 ADGRB2O60241 1585 aa9.83□□□□□ -0.84
SV2B-206ENST00000557410 FRAT2O75474 233 aaPredicted RBP9.83□□□□□ -0.84
SV2B-206ENST00000557410 SSH1Q8WYL5 1049 aa9.83□□□□□ -0.84
SV2B-206ENST00000557410 VIRMAQ69YN4 1812 aaKnown RBP9.83□□□□□ -0.84
SV2B-206ENST00000557410 TRIM27P14373 513 aa9.82□□□□□ -0.84
SV2B-206ENST00000557410 WAPLQ7Z5K2 1190 aa9.82□□□□□ -0.84
SV2B-206ENST00000557410 NOB1Q9ULX3 412 aaKnown RBP9.82□□□□□ -0.84
SV2B-206ENST00000557410 DDX19BQ9UMR2 479 aa9.82□□□□□ -0.84
SV2B-206ENST00000557410 USP19O94966 1318 aa9.82□□□□□ -0.84
SV2B-206ENST00000557410 ALKQ9UM73 1620 aa9.81□□□□□ -0.84
SV2B-206ENST00000557410 ATF7IPQ6VMQ6 1270 aa9.81□□□□□ -0.84
SV2B-206ENST00000557410 COL3A1P02461 1466 aaPredicted RBP9.81□□□□□ -0.84
SV2B-206ENST00000557410 IL16Q14005 1332 aa9.81□□□□□ -0.84
SV2B-206ENST00000557410 FBLN1P23142 703 aa9.81□□□□□ -0.84
SV2B-206ENST00000557410 KCNJ4P48050 445 aa9.81□□□□□ -0.84
SV2B-206ENST00000557410 CALD1Q05682 793 aaKnown RBP9.81□□□□□ -0.84
SV2B-206ENST00000557410 OS9Q13438 667 aaPredicted RBP9.81□□□□□ -0.84
SV2B-206ENST00000557410 CD163L1Q9NR16 1453 aa9.81□□□□□ -0.84
SV2B-206ENST00000557410 PRKAR2BP31323 418 aa9.8□□□□□ -0.84
SV2B-206ENST00000557410 RSPH6AQ9H0K4 717 aa9.8□□□□□ -0.84
SV2B-206ENST00000557410 MED14O60244 1454 aa9.8□□□□□ -0.84
SV2B-206ENST00000557410 FCHSD2O94868 740 aa9.8□□□□□ -0.84
SV2B-206ENST00000557410 ANKRD45Q5TZF3 282 aa9.8□□□□□ -0.84
SV2B-206ENST00000557410 ANKRD26Q9UPS8 1709 aa9.8□□□□□ -0.84
SV2B-206ENST00000557410 ANKLE2Q86XL3 938 aa9.8□□□□□ -0.84
SV2B-206ENST00000557410 FOXD4L5Q5VV16 416 aaPredicted RBP9.79□□□□□ -0.84
SV2B-206ENST00000557410 FOXD4L4Q8WXT5 416 aaPredicted RBP9.79□□□□□ -0.84
SV2B-206ENST00000557410 CLTCQ00610 1675 aaKnown RBP9.79□□□□□ -0.84
SV2B-206ENST00000557410 HMOX1P09601 288 aa9.79□□□□□ -0.84
SV2B-206ENST00000557410 TMEM57Q8N5G2 664 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms