RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 ITSN1Q15811 1721 aa11.01□□□□□ -0.65
PSEN1-222ENST00000557356 LRP6O75581 1613 aa11□□□□□ -0.65
PSEN1-222ENST00000557356 USP32Q8NFA0 1604 aa11□□□□□ -0.65
PSEN1-222ENST00000557356 SOCS7O14512 581 aa11□□□□□ -0.65
PSEN1-222ENST00000557356 TMF1P82094 1093 aa11□□□□□ -0.65
PSEN1-222ENST00000557356 POTEAQ6S8J7 498 aa11□□□□□ -0.65
PSEN1-222ENST00000557356 ABTB2Q8N961 1025 aa11□□□□□ -0.65
PSEN1-222ENST00000557356 TERF2IPQ9NYB0 399 aa11□□□□□ -0.65
PSEN1-222ENST00000557356 TRPC5Q9UL62 973 aaPredicted RBP11□□□□□ -0.65
PSEN1-222ENST00000557356 COL22A1Q8NFW1 1626 aaPredicted RBP10.99□□□□□ -0.65
PSEN1-222ENST00000557356 QRICH2Q9H0J4 1663 aa10.99□□□□□ -0.65
PSEN1-222ENST00000557356 RGPD8O14715 1765 aaPredicted RBP10.99□□□□□ -0.65
PSEN1-222ENST00000557356 HDGFL2Q7Z4V5 671 aaPredicted RBP10.99□□□□□ -0.65
PSEN1-222ENST00000557356 RBM6P78332 1123 aaKnown RBP10.98□□□□□ -0.65
PSEN1-222ENST00000557356 TMC1Q8TDI8 760 aa10.98□□□□□ -0.65
PSEN1-222ENST00000557356 NINLQ9Y2I6 1382 aa10.98□□□□□ -0.65
PSEN1-222ENST00000557356 EIF4G2P78344 907 aaKnown RBP eCLIP10.97□□□□□ -0.65
PSEN1-222ENST00000557356 CABLES1Q8TDN4 633 aa10.97□□□□□ -0.65
PSEN1-222ENST00000557356 TESK2Q96S53 571 aa10.97□□□□□ -0.65
PSEN1-222ENST00000557356 TTC21AQ8NDW8 1320 aa10.97□□□□□ -0.65
PSEN1-222ENST00000557356 USP47Q96K76 1375 aa10.97□□□□□ -0.65
PSEN1-222ENST00000557356 NLRP6P59044 892 aa10.96□□□□□ -0.65
PSEN1-222ENST00000557356 UNC5CLQ8IV45 518 aa10.96□□□□□ -0.65
PSEN1-222ENST00000557356 USP6P35125 1406 aa10.95□□□□□ -0.66
PSEN1-222ENST00000557356 KTN1Q86UP2 1357 aaKnown RBP10.95□□□□□ -0.66
PSEN1-222ENST00000557356 KCNH5Q8NCM2 988 aa10.95□□□□□ -0.66
PSEN1-222ENST00000557356 PRDM11Q9NQV5 511 aa10.95□□□□□ -0.66
PSEN1-222ENST00000557356 FAM83GA6ND36 823 aa10.94□□□□□ -0.66
PSEN1-222ENST00000557356 PLEKHG5O94827 1062 aa10.94□□□□□ -0.66
PSEN1-222ENST00000557356 SLC12A5Q9H2X9 1139 aa10.94□□□□□ -0.66
PSEN1-222ENST00000557356 CPSF1Q10570 1443 aaKnown RBP10.93□□□□□ -0.66
PSEN1-222ENST00000557356 TTC21BQ7Z4L5 1316 aa10.93□□□□□ -0.66
PSEN1-222ENST00000557356 TOPAZ1Q8N9V7 1692 aa10.93□□□□□ -0.66
PSEN1-222ENST00000557356 GCP02774 474 aa10.93□□□□□ -0.66
PSEN1-222ENST00000557356 GJD4Q96KN9 370 aaPredicted RBP10.93□□□□□ -0.66
PSEN1-222ENST00000557356 CDK12Q9NYV4 1490 aaPredicted RBP10.93□□□□□ -0.66
PSEN1-222ENST00000557356 VPS72Q15906 364 aa10.92□□□□□ -0.66
PSEN1-222ENST00000557356 NUTM2GQ5VZR2 741 aa10.92□□□□□ -0.66
PSEN1-222ENST00000557356 TRPM3Q9HCF6 1732 aaPredicted RBP10.92□□□□□ -0.66
PSEN1-222ENST00000557356 USP19O94966 1318 aa10.91□□□□□ -0.66
PSEN1-222ENST00000557356 SLIT2O94813 1529 aa10.91□□□□□ -0.66
PSEN1-222ENST00000557356 EVA1CP58658 441 aa10.91□□□□□ -0.66
PSEN1-222ENST00000557356 ZC3H6P61129 1189 aaKnown RBP10.91□□□□□ -0.66
PSEN1-222ENST00000557356 BTG4Q9NY30 223 aa10.91□□□□□ -0.66
PSEN1-222ENST00000557356 CCDC9Q9Y3X0 531 aaKnown RBP10.91□□□□□ -0.66
PSEN1-222ENST00000557356 BCL9LQ86UU0 1499 aa10.91□□□□□ -0.66
PSEN1-222ENST00000557356 ALS2Q96Q42 1657 aa10.91□□□□□ -0.66
PSEN1-222ENST00000557356 SSH2Q76I76 1423 aa10.91□□□□□ -0.66
PSEN1-222ENST00000557356 CPDO75976 1380 aa10.9□□□□□ -0.66
PSEN1-222ENST00000557356 ATRNO75882 1429 aa10.9□□□□□ -0.66
PSEN1-222ENST00000557356 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.89□□□□□ -0.67
PSEN1-222ENST00000557356 EDC4Q6P2E9 1401 aaKnown RBP10.89□□□□□ -0.67
PSEN1-222ENST00000557356 KIAA0232Q92628 1395 aa10.89□□□□□ -0.67
PSEN1-222ENST00000557356 ONECUT3O60422 494 aaPredicted RBP10.88□□□□□ -0.67
PSEN1-222ENST00000557356 MARF1Q9Y4F3 1742 aaKnown RBP10.88□□□□□ -0.67
PSEN1-222ENST00000557356 HSPA5P11021 654 aaKnown RBP10.87□□□□□ -0.67
PSEN1-222ENST00000557356 AATKQ6ZMQ8 1374 aa10.87□□□□□ -0.67
PSEN1-222ENST00000557356 USP31Q70CQ4 1352 aa10.87□□□□□ -0.67
PSEN1-222ENST00000557356 ANKRD36BQ8N2N9 1353 aa10.87□□□□□ -0.67
PSEN1-222ENST00000557356 CHRNA2Q15822 529 aa10.86□□□□□ -0.67
PSEN1-222ENST00000557356 COG3Q96JB2 828 aa10.86□□□□□ -0.67
PSEN1-222ENST00000557356 A0A1W2PP64 1363 aa10.86□□□□□ -0.67
PSEN1-222ENST00000557356 COL14A1Q05707 1796 aaKnown RBP10.85□□□□□ -0.67
PSEN1-222ENST00000557356 NWD2Q9ULI1 1742 aa10.85□□□□□ -0.67
PSEN1-222ENST00000557356 ARHGEF25Q86VW2 580 aa10.85□□□□□ -0.67
PSEN1-222ENST00000557356 CCDC125Q86Z20 511 aa10.85□□□□□ -0.67
PSEN1-222ENST00000557356 STRN4Q9NRL3 753 aa10.85□□□□□ -0.67
PSEN1-222ENST00000557356 THRAP3Q9Y2W1 955 aaKnown RBP10.85□□□□□ -0.67
PSEN1-222ENST00000557356 SPATA31A5Q5VU36 1347 aa10.84□□□□□ -0.67
PSEN1-222ENST00000557356 SPATA31A7Q8IWB4 1347 aa10.84□□□□□ -0.67
PSEN1-222ENST00000557356 A0A0G2JS52 829 aa10.84□□□□□ -0.67
PSEN1-222ENST00000557356 MYT1Q01538 1121 aa10.84□□□□□ -0.67
PSEN1-222ENST00000557356 NME9Q86XW9 330 aa10.84□□□□□ -0.67
PSEN1-222ENST00000557356 SEPT12Q8IYM1 358 aa10.84□□□□□ -0.67
PSEN1-222ENST00000557356 CD163L1Q9NR16 1453 aa10.84□□□□□ -0.67
PSEN1-222ENST00000557356 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.84□□□□□ -0.67
PSEN1-222ENST00000557356 ZBTB7CA1YPR0 619 aa10.83□□□□□ -0.68
PSEN1-222ENST00000557356 BARGINQ6ZT62 677 aa10.83□□□□□ -0.68
PSEN1-222ENST00000557356 POLR3GLQ9BT43 218 aa10.83□□□□□ -0.68
PSEN1-222ENST00000557356 AKAP12Q02952 1782 aa10.82□□□□□ -0.68
PSEN1-222ENST00000557356 C11orf95C9JLR9 678 aaPredicted RBP10.82□□□□□ -0.68
PSEN1-222ENST00000557356 FYB1O15117 783 aa10.82□□□□□ -0.68
PSEN1-222ENST00000557356 TCP11L2Q8N4U5 519 aa10.82□□□□□ -0.68
PSEN1-222ENST00000557356 CDCA7Q9BWT1 371 aaPredicted RBP10.82□□□□□ -0.68
PSEN1-222ENST00000557356 SLIT3O75094 1523 aa10.82□□□□□ -0.68
PSEN1-222ENST00000557356 RGS12O14924 1447 aa10.82□□□□□ -0.68
PSEN1-222ENST00000557356 CGNL1Q0VF96 1302 aa10.82□□□□□ -0.68
PSEN1-222ENST00000557356 SPATA31A1Q5TZJ5 1347 aa10.82□□□□□ -0.68
PSEN1-222ENST00000557356 ABCA3Q99758 1704 aa10.81□□□□□ -0.68
PSEN1-222ENST00000557356 SOX12O15370 315 aa10.81□□□□□ -0.68
PSEN1-222ENST00000557356 CSB-PGBD3P0DP91 1061 aa10.81□□□□□ -0.68
PSEN1-222ENST00000557356 FAM98CQ17RN3 349 aaKnown RBP10.81□□□□□ -0.68
PSEN1-222ENST00000557356 TOM1L2Q6ZVM7 507 aa10.81□□□□□ -0.68
PSEN1-222ENST00000557356 KRT27Q7Z3Y8 459 aa10.81□□□□□ -0.68
PSEN1-222ENST00000557356 PHRF1Q9P1Y6 1649 aaKnown RBP10.8□□□□□ -0.68
PSEN1-222ENST00000557356 UPF1Q92900 1129 aaKnown RBP eCLIP10.8□□□□□ -0.68
PSEN1-222ENST00000557356 MON2Q7Z3U7 1717 aa10.8□□□□□ -0.68
PSEN1-222ENST00000557356 CRYBG1Q9Y4K1 1723 aa10.8□□□□□ -0.68
PSEN1-222ENST00000557356 WDR17Q8IZU2 1322 aa10.8□□□□□ -0.68
PSEN1-222ENST00000557356 PLCH1Q4KWH8 1693 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms