RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 MS4A1P11836 297 aa24.93■■□□□ 1.58
FOXN3-214ENST00000557258 PLEKHF1Q96S99 279 aa24.93■■□□□ 1.58
FOXN3-214ENST00000557258 DIAPH1O60610 1272 aaKnown RBP24.93■■□□□ 1.58
FOXN3-214ENST00000557258 WDR63Q8IWG1 891 aa24.93■■□□□ 1.58
FOXN3-214ENST00000557258 ZBTB47Q9UFB7 747 aaPredicted RBP24.93■■□□□ 1.58
FOXN3-214ENST00000557258 PPP6R1Q9UPN7 881 aa24.93■■□□□ 1.58
FOXN3-214ENST00000557258 HMOX1P09601 288 aa24.92■■□□□ 1.58
FOXN3-214ENST00000557258 TMPOP42166 694 aaKnown RBP24.92■■□□□ 1.58
FOXN3-214ENST00000557258 EMILIN1Q9Y6C2 1016 aa24.91■■□□□ 1.58
FOXN3-214ENST00000557258 TRIM35Q9UPQ4 493 aa24.9■■□□□ 1.58
FOXN3-214ENST00000557258 KIF13AQ9H1H9 1805 aa24.9■■□□□ 1.58
FOXN3-214ENST00000557258 RIPK4P57078 832 aa24.89■■□□□ 1.58
FOXN3-214ENST00000557258 WASLO00401 505 aaPredicted RBP24.89■■□□□ 1.58
FOXN3-214ENST00000557258 EXOSC9Q06265 439 aaKnown RBP24.89■■□□□ 1.58
FOXN3-214ENST00000557258 REREQ9P2R6 1566 aa24.89■■□□□ 1.57
FOXN3-214ENST00000557258 POLKQ9UBT6 870 aa24.89■■□□□ 1.57
FOXN3-214ENST00000557258 MYH16Q9H6N6 1097 aa24.88■■□□□ 1.57
FOXN3-214ENST00000557258 COL3A1P02461 1466 aaPredicted RBP24.88■■□□□ 1.57
FOXN3-214ENST00000557258 CCDC27Q2M243 656 aa24.87■■□□□ 1.57
FOXN3-214ENST00000557258 LAS1LQ9Y4W2 734 aaKnown RBP24.87■■□□□ 1.57
FOXN3-214ENST00000557258 PDE3AQ14432 1141 aa24.87■■□□□ 1.57
FOXN3-214ENST00000557258 RRS1Q15050 365 aaKnown RBP24.87■■□□□ 1.57
FOXN3-214ENST00000557258 PPIP5K1Q6PFW1 1433 aa24.86■■□□□ 1.57
FOXN3-214ENST00000557258 NUDT16Q96DE0 195 aaKnown RBP24.86■■□□□ 1.57
FOXN3-214ENST00000557258 SLC26A8Q96RN1 970 aa24.86■■□□□ 1.57
FOXN3-214ENST00000557258 THUMPD2Q9BTF0 503 aaKnown RBP24.86■■□□□ 1.57
FOXN3-214ENST00000557258 PRKAR2BP31323 418 aa24.85■■□□□ 1.57
FOXN3-214ENST00000557258 TNRQ92752 1358 aa24.85■■□□□ 1.57
FOXN3-214ENST00000557258 NRXN3Q9Y4C0 1643 aa24.83■■□□□ 1.57
FOXN3-214ENST00000557258 SOX12O15370 315 aa24.83■■□□□ 1.57
FOXN3-214ENST00000557258 LTKP29376 864 aa24.83■■□□□ 1.57
FOXN3-214ENST00000557258 PHACTR3Q96KR7 559 aa24.83■■□□□ 1.57
FOXN3-214ENST00000557258 PCDHB15Q9Y5E8 787 aa24.83■■□□□ 1.57
FOXN3-214ENST00000557258 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.82■■□□□ 1.56
FOXN3-214ENST00000557258 SMC4Q9NTJ3 1288 aa24.82■■□□□ 1.56
FOXN3-214ENST00000557258 SETD1AO15047 1707 aaKnown RBP24.82■■□□□ 1.56
FOXN3-214ENST00000557258 SLC4A3P48751 1232 aa24.81■■□□□ 1.56
FOXN3-214ENST00000557258 C8orf34Q49A92 452 aa24.8■■□□□ 1.56
FOXN3-214ENST00000557258 PRR36Q9H6K5 1346 aa24.79■■□□□ 1.56
FOXN3-214ENST00000557258 ROBO2Q9HCK4 1378 aa24.79■■□□□ 1.56
FOXN3-214ENST00000557258 FTSJ3Q8IY81 847 aaKnown RBP24.79■■□□□ 1.56
FOXN3-214ENST00000557258 SSH1Q8WYL5 1049 aa24.79■■□□□ 1.56
FOXN3-214ENST00000557258 ADGRB2O60241 1585 aa24.78■■□□□ 1.56
FOXN3-214ENST00000557258 CCDC61Q9Y6R9 512 aa24.77■■□□□ 1.56
FOXN3-214ENST00000557258 TMEM2Q9UHN6 1383 aa24.77■■□□□ 1.56
FOXN3-214ENST00000557258 RSPH6AQ9H0K4 717 aa24.77■■□□□ 1.56
FOXN3-214ENST00000557258 FAM161AQ3B820 660 aa24.76■■□□□ 1.55
FOXN3-214ENST00000557258 PNPLA6Q8IY17 1366 aa24.76■■□□□ 1.55
FOXN3-214ENST00000557258 DLC1Q96QB1 1528 aa24.75■■□□□ 1.55
FOXN3-214ENST00000557258 KIF20BQ96Q89 1820 aa24.75■■□□□ 1.55
FOXN3-214ENST00000557258 MED14O60244 1454 aa24.75■■□□□ 1.55
FOXN3-214ENST00000557258 ELL2O00472 640 aaPredicted RBP24.75■■□□□ 1.55
FOXN3-214ENST00000557258 ANKRD26Q9UPS8 1709 aa24.74■■□□□ 1.55
FOXN3-214ENST00000557258 COG3Q96JB2 828 aa24.74■■□□□ 1.55
FOXN3-214ENST00000557258 ATP7BP35670 1465 aa24.74■■□□□ 1.55
FOXN3-214ENST00000557258 CPS1P31327 1500 aa24.73■■□□□ 1.55
FOXN3-214ENST00000557258 LRRC7Q96NW7 1537 aa24.73■■□□□ 1.55
FOXN3-214ENST00000557258 TRIM27P14373 513 aa24.73■■□□□ 1.55
FOXN3-214ENST00000557258 ZKSCAN2Q63HK3 967 aa24.73■■□□□ 1.55
FOXN3-214ENST00000557258 HDGFP51858 240 aaKnown RBP24.72■■□□□ 1.55
FOXN3-214ENST00000557258 NOB1Q9ULX3 412 aaKnown RBP24.72■■□□□ 1.55
FOXN3-214ENST00000557258 FCHSD2O94868 740 aa24.72■■□□□ 1.55
FOXN3-214ENST00000557258 ITPRIPQ8IWB1 547 aa24.72■■□□□ 1.55
FOXN3-214ENST00000557258 DZIP1LQ8IYY4 767 aaKnown RBP24.72■■□□□ 1.55
FOXN3-214ENST00000557258 CPSF1Q10570 1443 aaKnown RBP24.72■■□□□ 1.55
FOXN3-214ENST00000557258 MAP2P11137 1827 aaKnown RBP24.7■■□□□ 1.55
FOXN3-214ENST00000557258 EDC4Q6P2E9 1401 aaKnown RBP24.7■■□□□ 1.54
FOXN3-214ENST00000557258 FAM83GA6ND36 823 aa24.7■■□□□ 1.54
FOXN3-214ENST00000557258 NEFMP07197 916 aa24.7■■□□□ 1.54
FOXN3-214ENST00000557258 DCTN1Q14203 1278 aa24.69■■□□□ 1.54
FOXN3-214ENST00000557258 MVPQ14764 893 aaKnown RBP24.69■■□□□ 1.54
FOXN3-214ENST00000557258 PMFBP1Q8TBY8 1022 aa24.69■■□□□ 1.54
FOXN3-214ENST00000557258 IL13P35225 146 aa24.69■■□□□ 1.54
FOXN3-214ENST00000557258 ADAMTS13Q76LX8 1427 aa24.67■■□□□ 1.54
FOXN3-214ENST00000557258 SEC24BO95487 1268 aa24.67■■□□□ 1.54
FOXN3-214ENST00000557258 AEBP1Q8IUX7 1158 aa24.67■■□□□ 1.54
FOXN3-214ENST00000557258 ACEP12821 1306 aa24.66■■□□□ 1.54
FOXN3-214ENST00000557258 TSPYL6Q8N831 410 aa24.66■■□□□ 1.54
FOXN3-214ENST00000557258 PDZRN3Q9UPQ7 1066 aa24.65■■□□□ 1.54
FOXN3-214ENST00000557258 FAM135BQ49AJ0 1406 aa24.65■■□□□ 1.54
FOXN3-214ENST00000557258 UBR1Q8IWV7 1749 aa24.64■■□□□ 1.54
FOXN3-214ENST00000557258 TMEM57Q8N5G2 664 aa24.64■■□□□ 1.54
FOXN3-214ENST00000557258 NFE2L2Q16236 605 aa24.64■■□□□ 1.53
FOXN3-214ENST00000557258 ATF7IPQ6VMQ6 1270 aa24.64■■□□□ 1.53
FOXN3-214ENST00000557258 PNNQ9H307 717 aaKnown RBP24.64■■□□□ 1.53
FOXN3-214ENST00000557258 TRHP20396 242 aaPredicted RBP24.63■■□□□ 1.53
FOXN3-214ENST00000557258 AMOTL2Q9Y2J4 779 aa24.62■■□□□ 1.53
FOXN3-214ENST00000557258 EID1Q9Y6B2 187 aa24.6■■□□□ 1.53
FOXN3-214ENST00000557258 PTPRUQ92729 1446 aa24.6■■□□□ 1.53
FOXN3-214ENST00000557258 CDC42BPGQ6DT37 1551 aa24.6■■□□□ 1.53
FOXN3-214ENST00000557258 NCBP3Q53F19 620 aaKnown RBP24.59■■□□□ 1.53
FOXN3-214ENST00000557258 TECPR2O15040 1411 aa24.59■■□□□ 1.53
FOXN3-214ENST00000557258 HSP90AB2PQ58FF8 381 aa24.59■■□□□ 1.53
FOXN3-214ENST00000557258 RBM33Q96EV2 1170 aaKnown RBP24.59■■□□□ 1.53
FOXN3-214ENST00000557258 IL16Q14005 1332 aa24.59■■□□□ 1.53
FOXN3-214ENST00000557258 TTC21BQ7Z4L5 1316 aa24.59■■□□□ 1.53
FOXN3-214ENST00000557258 SULT6B1Q6IMI4 303 aa24.58■■□□□ 1.53
FOXN3-214ENST00000557258 RWDD1Q9H446 243 aaPredicted RBP24.58■■□□□ 1.53
FOXN3-214ENST00000557258 MBIPQ9NS73 344 aa24.58■■□□□ 1.53
FOXN3-214ENST00000557258 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms