RNA–Protein interactions for RNA: ENST00000557060.1

SYNE2-225, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 3,203 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-225ENST00000557060 DIAPH1O60610 1272 aaKnown RBP7.74□□□□□ -1.17
SYNE2-225ENST00000557060 THEMISQ8N1K5 641 aaPredicted RBP7.74□□□□□ -1.17
SYNE2-225ENST00000557060 NGDNQ8NEJ9 315 aaKnown RBP7.73□□□□□ -1.17
SYNE2-225ENST00000557060 THUMPD2Q9BTF0 503 aaKnown RBP7.73□□□□□ -1.17
SYNE2-225ENST00000557060 PRR36Q9H6K5 1346 aa7.73□□□□□ -1.17
SYNE2-225ENST00000557060 KCNA6P17658 529 aa7.73□□□□□ -1.17
SYNE2-225ENST00000557060 COG3Q96JB2 828 aa7.73□□□□□ -1.17
SYNE2-225ENST00000557060 POLR3AO14802 1390 aaPredicted RBP7.73□□□□□ -1.17
SYNE2-225ENST00000557060 ABCC11Q96J66 1382 aa7.73□□□□□ -1.17
SYNE2-225ENST00000557060 MYO3AQ8NEV4 1616 aa7.73□□□□□ -1.17
SYNE2-225ENST00000557060 BCL11AQ9H165 835 aa7.73□□□□□ -1.17
SYNE2-225ENST00000557060 POLKQ9UBT6 870 aa7.72□□□□□ -1.17
SYNE2-225ENST00000557060 RNF123Q5XPI4 1314 aa7.72□□□□□ -1.17
SYNE2-225ENST00000557060 E9PSI1 815 aa7.72□□□□□ -1.17
SYNE2-225ENST00000557060 ELL2O00472 640 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-225ENST00000557060 TCERG1O14776 1098 aaKnown RBP7.72□□□□□ -1.17
SYNE2-225ENST00000557060 PRKAR2BP31323 418 aa7.72□□□□□ -1.17
SYNE2-225ENST00000557060 RIPK4P57078 832 aa7.72□□□□□ -1.17
SYNE2-225ENST00000557060 ERICH6BQ5W0A0 696 aa7.72□□□□□ -1.17
SYNE2-225ENST00000557060 ACEP12821 1306 aa7.72□□□□□ -1.17
SYNE2-225ENST00000557060 ZNF521Q96K83 1311 aa7.72□□□□□ -1.17
SYNE2-225ENST00000557060 LMOD2Q6P5Q4 547 aa7.71□□□□□ -1.17
SYNE2-225ENST00000557060 PANK1Q8TE04 598 aa7.71□□□□□ -1.17
SYNE2-225ENST00000557060 REREQ9P2R6 1566 aa7.71□□□□□ -1.18
SYNE2-225ENST00000557060 NEFMP07197 916 aa7.71□□□□□ -1.18
SYNE2-225ENST00000557060 XPCQ01831 940 aaPredicted RBP7.71□□□□□ -1.18
SYNE2-225ENST00000557060 NPM2Q86SE8 214 aaKnown RBP7.71□□□□□ -1.18
SYNE2-225ENST00000557060 TNNQ9UQP3 1299 aa7.71□□□□□ -1.18
SYNE2-225ENST00000557060 COG6Q9Y2V7 657 aa7.71□□□□□ -1.18
SYNE2-225ENST00000557060 CD163L1Q9NR16 1453 aa7.71□□□□□ -1.18
SYNE2-225ENST00000557060 PHACTR3Q96KR7 559 aa7.7□□□□□ -1.18
SYNE2-225ENST00000557060 PUS7Q96PZ0 661 aaKnown RBP7.7□□□□□ -1.18
SYNE2-225ENST00000557060 LTV1Q96GA3 475 aaPredicted RBP7.7□□□□□ -1.18
SYNE2-225ENST00000557060 ADAMTS13Q76LX8 1427 aa7.69□□□□□ -1.18
SYNE2-225ENST00000557060 TMPOP42166 694 aaKnown RBP7.69□□□□□ -1.18
SYNE2-225ENST00000557060 DCTN1Q14203 1278 aa7.69□□□□□ -1.18
SYNE2-225ENST00000557060 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.69□□□□□ -1.18
SYNE2-225ENST00000557060 RGS3P49796 1198 aa7.69□□□□□ -1.18
SYNE2-225ENST00000557060 HSP90AB2PQ58FF8 381 aa7.69□□□□□ -1.18
SYNE2-225ENST00000557060 NINLQ9Y2I6 1382 aa7.68□□□□□ -1.18
SYNE2-225ENST00000557060 FAM83GA6ND36 823 aa7.68□□□□□ -1.18
SYNE2-225ENST00000557060 AEBP1Q8IUX7 1158 aa7.68□□□□□ -1.18
SYNE2-225ENST00000557060 NSD2O96028 1365 aa7.68□□□□□ -1.18
SYNE2-225ENST00000557060 PTPRUQ92729 1446 aa7.68□□□□□ -1.18
SYNE2-225ENST00000557060 EXOSC9Q06265 439 aaKnown RBP7.68□□□□□ -1.18
SYNE2-225ENST00000557060 ANKLE2Q86XL3 938 aa7.68□□□□□ -1.18
SYNE2-225ENST00000557060 NLRP6P59044 892 aa7.67□□□□□ -1.18
SYNE2-225ENST00000557060 NKTRP30414 1462 aaKnown RBP7.67□□□□□ -1.18
SYNE2-225ENST00000557060 SULT6B1Q6IMI4 303 aa7.67□□□□□ -1.18
SYNE2-225ENST00000557060 PLEKHG1Q9ULL1 1385 aa7.67□□□□□ -1.18
SYNE2-225ENST00000557060 NRXN3Q9Y4C0 1643 aa7.67□□□□□ -1.18
SYNE2-225ENST00000557060 SMC4Q9NTJ3 1288 aa7.67□□□□□ -1.18
SYNE2-225ENST00000557060 ESCO1Q5FWF5 840 aa7.66□□□□□ -1.18
SYNE2-225ENST00000557060 TTC21BQ7Z4L5 1316 aa7.66□□□□□ -1.18
SYNE2-225ENST00000557060 PLEKHF1Q96S99 279 aa7.66□□□□□ -1.18
SYNE2-225ENST00000557060 MYH16Q9H6N6 1097 aa7.66□□□□□ -1.18
SYNE2-225ENST00000557060 TRIM35Q9UPQ4 493 aa7.66□□□□□ -1.18
SYNE2-225ENST00000557060 UBR1Q8IWV7 1749 aa7.66□□□□□ -1.18
SYNE2-225ENST00000557060 FANCIQ9NVI1 1328 aa7.66□□□□□ -1.18
SYNE2-225ENST00000557060 ABTB2Q8N961 1025 aa7.66□□□□□ -1.18
SYNE2-225ENST00000557060 TBX22Q9Y458 520 aa7.66□□□□□ -1.18
SYNE2-225ENST00000557060 NLRP1Q9C000 1473 aa7.66□□□□□ -1.18
SYNE2-225ENST00000557060 RLBP1P12271 317 aa7.65□□□□□ -1.18
SYNE2-225ENST00000557060 AMPHP49418 695 aa7.65□□□□□ -1.18
SYNE2-225ENST00000557060 RARSP54136 660 aaKnown RBP7.65□□□□□ -1.18
SYNE2-225ENST00000557060 HSPA2P54652 639 aa7.65□□□□□ -1.18
SYNE2-225ENST00000557060 FTSJ3Q8IY81 847 aaKnown RBP7.65□□□□□ -1.18
SYNE2-225ENST00000557060 ZNF692Q9BU19 519 aaPredicted RBP7.65□□□□□ -1.18
SYNE2-225ENST00000557060 CPS1P31327 1500 aa7.65□□□□□ -1.18
SYNE2-225ENST00000557060 TRMT2AQ8IZ69 625 aaKnown RBP7.65□□□□□ -1.18
SYNE2-225ENST00000557060 C3P01024 1663 aa7.65□□□□□ -1.19
SYNE2-225ENST00000557060 FOXO3O43524 673 aa7.65□□□□□ -1.19
SYNE2-225ENST00000557060 RSPH6AQ9H0K4 717 aa7.65□□□□□ -1.19
SYNE2-225ENST00000557060 EDC4Q6P2E9 1401 aaKnown RBP7.64□□□□□ -1.19
SYNE2-225ENST00000557060 DNAJC5Q9H3Z4 198 aa7.64□□□□□ -1.19
SYNE2-225ENST00000557060 MIS18AQ9NYP9 233 aa7.64□□□□□ -1.19
SYNE2-225ENST00000557060 FER1L4A9Z1Z3 1794 aa7.64□□□□□ -1.19
SYNE2-225ENST00000557060 FCHSD2O94868 740 aa7.64□□□□□ -1.19
SYNE2-225ENST00000557060 HOXD11P31277 338 aaPredicted RBP7.64□□□□□ -1.19
SYNE2-225ENST00000557060 IL13P35225 146 aa7.64□□□□□ -1.19
SYNE2-225ENST00000557060 MCM10Q7L590 875 aa7.64□□□□□ -1.19
SYNE2-225ENST00000557060 WDR63Q8IWG1 891 aa7.64□□□□□ -1.19
SYNE2-225ENST00000557060 ATP7BP35670 1465 aa7.64□□□□□ -1.19
SYNE2-225ENST00000557060 INSRP06213 1382 aa7.64□□□□□ -1.19
SYNE2-225ENST00000557060 EIF4A2Q14240 407 aaKnown RBP7.63□□□□□ -1.19
SYNE2-225ENST00000557060 CPSF1Q10570 1443 aaKnown RBP7.63□□□□□ -1.19
SYNE2-225ENST00000557060 FAM135BQ49AJ0 1406 aa7.63□□□□□ -1.19
SYNE2-225ENST00000557060 PSME1Q06323 249 aa7.63□□□□□ -1.19
SYNE2-225ENST00000557060 USHBP1Q8N6Y0 703 aa7.63□□□□□ -1.19
SYNE2-225ENST00000557060 SHPRHQ149N8 1683 aa7.63□□□□□ -1.19
SYNE2-225ENST00000557060 KRT24Q2M2I5 525 aa7.63□□□□□ -1.19
SYNE2-225ENST00000557060 ERICH6Q7L0X2 663 aa7.63□□□□□ -1.19
SYNE2-225ENST00000557060 ITPRIPQ8IWB1 547 aa7.63□□□□□ -1.19
SYNE2-225ENST00000557060 SSH1Q8WYL5 1049 aa7.63□□□□□ -1.19
SYNE2-225ENST00000557060 ORAI2Q96SN7 254 aa7.63□□□□□ -1.19
SYNE2-225ENST00000557060 MAP3K19Q56UN5 1328 aa7.62□□□□□ -1.19
SYNE2-225ENST00000557060 TSPYL6Q8N831 410 aa7.62□□□□□ -1.19
SYNE2-225ENST00000557060 DDX17Q92841 729 aaKnown RBP7.62□□□□□ -1.19
SYNE2-225ENST00000557060 ATF5Q9Y2D1 282 aaPredicted RBP7.62□□□□□ -1.19
SYNE2-225ENST00000557060 DLC1Q96QB1 1528 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms